Jatropha Genome Database

JcCA0286161.30
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0286161.30 - phase: 0 /partial
         (209 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma03g39890.1                                                       266   8e-72
Glyma03g39890.3                                                       266   1e-71
Glyma03g39890.2                                                       266   1e-71
Glyma19g42440.1                                                       256   1e-68
Glyma19g42440.2                                                       180   8e-46
Glyma20g08840.1                                                       151   4e-37

>Glyma03g39890.1 
          Length = 387

 Score =  266 bits (681), Expect = 8e-72,   Method: Compositional matrix adjust.
 Identities = 132/210 (62%), Positives = 160/210 (76%), Gaps = 1/210 (0%)

Query: 1   MEVKARAPGKIILSGEHAVVHGSTAVASSINLYTYVTLSFPT-SENDGTLKLQLKDMALE 59
           MEVK+RAPGKIIL+GEHAVVHGSTAVASSI+LYTYV+L F T S+N+ +LKL+L++ ALE
Sbjct: 1   MEVKSRAPGKIILTGEHAVVHGSTAVASSIDLYTYVSLHFSTPSDNEDSLKLKLQETALE 60

Query: 60  FSWPIGKIKEALPNLGAPSASTPTSCSIESVKSISALVEEQNIPEAKIALASGIAAFLWL 119
           FSWPI +I+ A P   A  +STP SCS+E+ K+I+ALVEE NIPEAK+ LASG++AFLWL
Sbjct: 61  FSWPITRIRAAFPESTAQLSSTPNSCSVENAKAIAALVEELNIPEAKLGLASGVSAFLWL 120

Query: 120 YTSIQGFRPATVVVTSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXNVDKMHQGWLIFGES 179
           Y+SIQGF+PATVVVTS+                            ++D  HQGWL FGE 
Sbjct: 121 YSSIQGFKPATVVVTSELPLGSGLGSSASFCVALAAALLAYTDSVSLDLKHQGWLSFGEK 180

Query: 180 ELELLNKWAFEGEKLIHGKPSGIDNTVSTY 209
           +LEL+NKWAFEGEK+IHGKPSGIDNTVS Y
Sbjct: 181 DLELVNKWAFEGEKIIHGKPSGIDNTVSAY 210


>Glyma03g39890.3 
          Length = 343

 Score =  266 bits (680), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 132/210 (62%), Positives = 160/210 (76%), Gaps = 1/210 (0%)

Query: 1   MEVKARAPGKIILSGEHAVVHGSTAVASSINLYTYVTLSFPT-SENDGTLKLQLKDMALE 59
           MEVK+RAPGKIIL+GEHAVVHGSTAVASSI+LYTYV+L F T S+N+ +LKL+L++ ALE
Sbjct: 1   MEVKSRAPGKIILTGEHAVVHGSTAVASSIDLYTYVSLHFSTPSDNEDSLKLKLQETALE 60

Query: 60  FSWPIGKIKEALPNLGAPSASTPTSCSIESVKSISALVEEQNIPEAKIALASGIAAFLWL 119
           FSWPI +I+ A P   A  +STP SCS+E+ K+I+ALVEE NIPEAK+ LASG++AFLWL
Sbjct: 61  FSWPITRIRAAFPESTAQLSSTPNSCSVENAKAIAALVEELNIPEAKLGLASGVSAFLWL 120

Query: 120 YTSIQGFRPATVVVTSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXNVDKMHQGWLIFGES 179
           Y+SIQGF+PATVVVTS+                            ++D  HQGWL FGE 
Sbjct: 121 YSSIQGFKPATVVVTSELPLGSGLGSSASFCVALAAALLAYTDSVSLDLKHQGWLSFGEK 180

Query: 180 ELELLNKWAFEGEKLIHGKPSGIDNTVSTY 209
           +LEL+NKWAFEGEK+IHGKPSGIDNTVS Y
Sbjct: 181 DLELVNKWAFEGEKIIHGKPSGIDNTVSAY 210


>Glyma03g39890.2 
          Length = 340

 Score =  266 bits (680), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 132/210 (62%), Positives = 160/210 (76%), Gaps = 1/210 (0%)

Query: 1   MEVKARAPGKIILSGEHAVVHGSTAVASSINLYTYVTLSFPT-SENDGTLKLQLKDMALE 59
           MEVK+RAPGKIIL+GEHAVVHGSTAVASSI+LYTYV+L F T S+N+ +LKL+L++ ALE
Sbjct: 1   MEVKSRAPGKIILTGEHAVVHGSTAVASSIDLYTYVSLHFSTPSDNEDSLKLKLQETALE 60

Query: 60  FSWPIGKIKEALPNLGAPSASTPTSCSIESVKSISALVEEQNIPEAKIALASGIAAFLWL 119
           FSWPI +I+ A P   A  +STP SCS+E+ K+I+ALVEE NIPEAK+ LASG++AFLWL
Sbjct: 61  FSWPITRIRAAFPESTAQLSSTPNSCSVENAKAIAALVEELNIPEAKLGLASGVSAFLWL 120

Query: 120 YTSIQGFRPATVVVTSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXNVDKMHQGWLIFGES 179
           Y+SIQGF+PATVVVTS+                            ++D  HQGWL FGE 
Sbjct: 121 YSSIQGFKPATVVVTSELPLGSGLGSSASFCVALAAALLAYTDSVSLDLKHQGWLSFGEK 180

Query: 180 ELELLNKWAFEGEKLIHGKPSGIDNTVSTY 209
           +LEL+NKWAFEGEK+IHGKPSGIDNTVS Y
Sbjct: 181 DLELVNKWAFEGEKIIHGKPSGIDNTVSAY 210


>Glyma19g42440.1 
          Length = 383

 Score =  256 bits (654), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 128/210 (60%), Positives = 156/210 (74%), Gaps = 5/210 (2%)

Query: 1   MEVKARAPGKIILSGEHAVVHGSTAVASSINLYTYVTLSFPT-SENDGTLKLQLKDMALE 59
           MEVK+RAPGKIILSGEHAVVHGSTAVASSI+LYTYV+L F T S++  +LKLQLK+ ALE
Sbjct: 1   MEVKSRAPGKIILSGEHAVVHGSTAVASSIDLYTYVSLRFSTPSDDQDSLKLQLKETALE 60

Query: 60  FSWPIGKIKEALPNLGAPSASTPTSCSIESVKSISALVEEQNIPEAKIALASGIAAFLWL 119
           FSWPI +I+ + P L    +STPTSCS+E+ K+I+ALV++ NIPEA   LASG++AFLWL
Sbjct: 61  FSWPITRIRASFPQL----SSTPTSCSVENAKAIAALVQDLNIPEANFGLASGVSAFLWL 116

Query: 120 YTSIQGFRPATVVVTSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXNVDKMHQGWLIFGES 179
           Y+SIQGF+PATV+VTS+                            +    HQGWL FGE 
Sbjct: 117 YSSIQGFKPATVLVTSELPLGSGLGSSASFCVALAAALLAYTDSVSFHVNHQGWLSFGEK 176

Query: 180 ELELLNKWAFEGEKLIHGKPSGIDNTVSTY 209
           +LEL+N+WAFEGEK+IHGKPSGIDNTVS Y
Sbjct: 177 DLELVNQWAFEGEKIIHGKPSGIDNTVSAY 206


>Glyma19g42440.2 
          Length = 358

 Score =  180 bits (457), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 88/159 (55%), Positives = 110/159 (69%), Gaps = 4/159 (2%)

Query: 51  LQLKDMALEFSWPIGKIKEALPNLGAPSASTPTSCSIESVKSISALVEEQNIPEAKIALA 110
           LQLK+ ALEFSWPI +I+ + P L    +STPTSCS+E+ K+I+ALV++ NIPEA   LA
Sbjct: 27  LQLKETALEFSWPITRIRASFPQL----SSTPTSCSVENAKAIAALVQDLNIPEANFGLA 82

Query: 111 SGIAAFLWLYTSIQGFRPATVVVTSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXNVDKMH 170
           SG++AFLWLY+SIQGF+PATV+VTS+                            +    H
Sbjct: 83  SGVSAFLWLYSSIQGFKPATVLVTSELPLGSGLGSSASFCVALAAALLAYTDSVSFHVNH 142

Query: 171 QGWLIFGESELELLNKWAFEGEKLIHGKPSGIDNTVSTY 209
           QGWL FGE +LEL+N+WAFEGEK+IHGKPSGIDNTVS Y
Sbjct: 143 QGWLSFGEKDLELVNQWAFEGEKIIHGKPSGIDNTVSAY 181


>Glyma20g08840.1 
          Length = 118

 Score =  151 bits (382), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 77/118 (65%), Positives = 95/118 (80%), Gaps = 1/118 (0%)

Query: 1   MEVKARAPGKIILSGEHAVVHGSTAVASSINLYTYVTLSFPT-SENDGTLKLQLKDMALE 59
           +EVK+RAPGKIIL+GEHAVVHGSTAVASSI+LYTYV+L F T S+N+ +LKL+LK+ ALE
Sbjct: 1   IEVKSRAPGKIILTGEHAVVHGSTAVASSIDLYTYVSLCFSTPSDNEDSLKLKLKEAALE 60

Query: 60  FSWPIGKIKEALPNLGAPSASTPTSCSIESVKSISALVEEQNIPEAKIALASGIAAFL 117
           FSW I KI+ A P      +S P SCS+E+ K I+ LVEE NIPEAK+ LA G++AFL
Sbjct: 61  FSWSITKIRAAFPESTTQLSSPPNSCSVENAKVIATLVEELNIPEAKLGLAYGVSAFL 118