Jatropha Genome Database
- JcCA0286161.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0286161.10 - phase: 0
(88 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma20g37660.1 135 9e-33
Glyma20g37660.2 135 1e-32
Glyma10g29640.1 126 5e-30
Glyma15g05920.1 97 3e-21
Glyma08g19070.1 95 1e-20
Glyma05g24400.1 82 9e-17
Glyma05g24400.2 82 9e-17
Glyma05g33810.1 81 2e-16
Glyma08g05870.2 76 1e-14
Glyma08g05870.1 76 1e-14
>Glyma20g37660.1
Length = 433
Score = 135 bits (340), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 66/87 (75%), Positives = 71/87 (81%), Gaps = 1/87 (1%)
Query: 1 MARNPDYGAFMEKFVLKPTNSSDELPLNGLTFAVKDIFXVDGYVTGFGNPDWARTHLAAT 60
M DYGAFMEKF L P NS+ LPLN LTFAVK+IF V+GYVTGFGNPDWARTH AT
Sbjct: 1 METASDYGAFMEKFTLPP-NSAPSLPLNSLTFAVKEIFDVEGYVTGFGNPDWARTHTVAT 59
Query: 61 STAPAVLAILREXATCIGKTVMDEMAY 87
STAP VLA+LR ATC+GKTVMDEMAY
Sbjct: 60 STAPTVLALLRAGATCVGKTVMDEMAY 86
>Glyma20g37660.2
Length = 391
Score = 135 bits (339), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 66/87 (75%), Positives = 71/87 (81%), Gaps = 1/87 (1%)
Query: 1 MARNPDYGAFMEKFVLKPTNSSDELPLNGLTFAVKDIFXVDGYVTGFGNPDWARTHLAAT 60
M DYGAFMEKF L P NS+ LPLN LTFAVK+IF V+GYVTGFGNPDWARTH AT
Sbjct: 1 METASDYGAFMEKFTLPP-NSAPSLPLNSLTFAVKEIFDVEGYVTGFGNPDWARTHTVAT 59
Query: 61 STAPAVLAILREXATCIGKTVMDEMAY 87
STAP VLA+LR ATC+GKTVMDEMAY
Sbjct: 60 STAPTVLALLRAGATCVGKTVMDEMAY 86
>Glyma10g29640.1
Length = 464
Score = 126 bits (317), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 62/87 (71%), Positives = 67/87 (77%), Gaps = 1/87 (1%)
Query: 1 MARNPDYGAFMEKFVLKPTNSSDELPLNGLTFAVKDIFXVDGYVTGFGNPDWARTHLAAT 60
M DYGAF EKF L P NS+ LPL LTFAVK+IF +GYVTGFGNPDWARTH AT
Sbjct: 32 METASDYGAFTEKFTLPP-NSAPALPLKSLTFAVKEIFDTEGYVTGFGNPDWARTHPVAT 90
Query: 61 STAPAVLAILREXATCIGKTVMDEMAY 87
STAP LA+LR ATC+GKTVMDEMAY
Sbjct: 91 STAPTALALLRAGATCVGKTVMDEMAY 117
>Glyma15g05920.1
Length = 595
Score = 97.4 bits (241), Expect = 3e-21, Method: Composition-based stats.
Identities = 45/84 (53%), Positives = 58/84 (69%), Gaps = 1/84 (1%)
Query: 5 PDYGAFMEKFVLKPTNSSDEL-PLNGLTFAVKDIFXVDGYVTGFGNPDWARTHLAATSTA 63
PD+GAF+E+F L P ++ L+ LTFA+KDIF V GYVTGFGNP W + H A TA
Sbjct: 41 PDFGAFVERFELLPIPQPNQTQTLSALTFAIKDIFDVKGYVTGFGNPQWKKMHNEAGKTA 100
Query: 64 PAVLAILREXATCIGKTVMDEMAY 87
+ A+L ATC+GKTVMDE ++
Sbjct: 101 IVITALLSNGATCVGKTVMDEFSF 124
>Glyma08g19070.1
Length = 598
Score = 95.1 bits (235), Expect = 1e-20, Method: Composition-based stats.
Identities = 44/83 (53%), Positives = 58/83 (69%), Gaps = 1/83 (1%)
Query: 6 DYGAFMEKFVLKPTNSSDEL-PLNGLTFAVKDIFXVDGYVTGFGNPDWARTHLAATSTAP 64
D+GAF+E+ L P ++ L+ LTFA+KDIF V GYVTGFGNP W +TH A TA
Sbjct: 45 DFGAFVERIELLPIPQPNQTQTLSALTFAIKDIFDVKGYVTGFGNPQWKKTHGEAGKTAI 104
Query: 65 AVLAILREXATCIGKTVMDEMAY 87
+ A+L + ATC+GKTVMDE ++
Sbjct: 105 VITALLSDGATCVGKTVMDEFSF 127
>Glyma05g24400.1
Length = 603
Score = 82.4 bits (202), Expect = 9e-17, Method: Composition-based stats.
Identities = 42/86 (48%), Positives = 55/86 (63%), Gaps = 4/86 (4%)
Query: 6 DYGAFMEKFVL----KPTNSSDELPLNGLTFAVKDIFXVDGYVTGFGNPDWARTHLAATS 61
D+GAF+E+F L +P + + L+ LTFA+ D F V YVTGFGN W TH AA
Sbjct: 47 DFGAFVERFELLPFPQPPPPAAKQSLSALTFAINDTFDVKDYVTGFGNSTWKSTHKAAEK 106
Query: 62 TAPAVLAILREXATCIGKTVMDEMAY 87
TA V A+L ATC+GKTV+DE ++
Sbjct: 107 TAVVVTALLMSGATCVGKTVVDEFSF 132
>Glyma05g24400.2
Length = 578
Score = 82.4 bits (202), Expect = 9e-17, Method: Composition-based stats.
Identities = 42/86 (48%), Positives = 55/86 (63%), Gaps = 4/86 (4%)
Query: 6 DYGAFMEKFVL----KPTNSSDELPLNGLTFAVKDIFXVDGYVTGFGNPDWARTHLAATS 61
D+GAF+E+F L +P + + L+ LTFA+ D F V YVTGFGN W TH AA
Sbjct: 47 DFGAFVERFELLPFPQPPPPAAKQSLSALTFAINDTFDVKDYVTGFGNSTWKSTHKAAEK 106
Query: 62 TAPAVLAILREXATCIGKTVMDEMAY 87
TA V A+L ATC+GKTV+DE ++
Sbjct: 107 TAVVVTALLMSGATCVGKTVVDEFSF 132
>Glyma05g33810.1
Length = 587
Score = 81.3 bits (199), Expect = 2e-16, Method: Composition-based stats.
Identities = 40/85 (47%), Positives = 55/85 (64%), Gaps = 4/85 (4%)
Query: 6 DYGAFMEKFVLKPTNSSDEL----PLNGLTFAVKDIFXVDGYVTGFGNPDWARTHLAATS 61
D+GAF+ K L P PL LTFA+ D+F + G+V FG+PDWARTH ++S
Sbjct: 30 DFGAFIHKLQLLPPPQPSPPKAPHPLTSLTFALSDLFHIHGHVPSFGHPDWARTHEPSSS 89
Query: 62 TAPAVLAILREXATCIGKTVMDEMA 86
TAPAV A++ ATC+ TV+D++A
Sbjct: 90 TAPAVSALVEGGATCVATTVLDDLA 114
>Glyma08g05870.2
Length = 591
Score = 75.9 bits (185), Expect = 1e-14, Method: Composition-based stats.
Identities = 31/58 (53%), Positives = 46/58 (79%)
Query: 29 GLTFAVKDIFXVDGYVTGFGNPDWARTHLAATSTAPAVLAILREXATCIGKTVMDEMA 86
LTFA+ D+F ++G+V+ FG+P+WARTH A+STAPAV A++ ATC+ TV+D++A
Sbjct: 61 ALTFALSDLFDIEGHVSTFGHPEWARTHEPASSTAPAVSALVEGGATCVATTVLDDLA 118
>Glyma08g05870.1
Length = 591
Score = 75.9 bits (185), Expect = 1e-14, Method: Composition-based stats.
Identities = 31/58 (53%), Positives = 46/58 (79%)
Query: 29 GLTFAVKDIFXVDGYVTGFGNPDWARTHLAATSTAPAVLAILREXATCIGKTVMDEMA 86
LTFA+ D+F ++G+V+ FG+P+WARTH A+STAPAV A++ ATC+ TV+D++A
Sbjct: 61 ALTFALSDLFDIEGHVSTFGHPEWARTHEPASSTAPAVSALVEGGATCVATTVLDDLA 118