Jatropha Genome Database

JcCA0285281.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0285281.10 + phase: 0 /partial
         (129 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g52600.1                                                       167   3e-42
Glyma19g36910.2                                                       132   1e-31
Glyma19g36910.1                                                       132   1e-31
Glyma03g34210.1                                                       130   2e-31
Glyma15g04510.1                                                       130   3e-31
Glyma13g20840.1                                                       122   1e-28
Glyma10g06630.1                                                       120   3e-28
Glyma13g40950.1                                                       116   5e-27

>Glyma18g52600.1 
          Length = 442

 Score =  167 bits (423), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 83/127 (65%), Positives = 98/127 (77%), Gaps = 3/127 (2%)

Query: 1   MGIPTSDDVVLIQHAKTSADPSVVTVNCPDKAGLGCDLCRIILEFGLSITRADFSTDGRW 60
           MGIP  DDVV+IQ  K   +P +VTVNCPDKAGLGCDLCRIILEFGL ITRAD STDGRW
Sbjct: 24  MGIPW-DDVVVIQQGKDHNEPCIVTVNCPDKAGLGCDLCRIILEFGLRITRADISTDGRW 82

Query: 61  CYIVFWVVPDSTSSSHKLDWDSLKNRLSFASPPCLIPFYFDQKSNGPSLPPLYLLKFCFV 120
           CYIV+WV+  +  +S  +DW+SLK RL  A P CL+ ++F+Q S  PS PP+YLLK   V
Sbjct: 83  CYIVYWVL--AHPASLNVDWESLKTRLLSACPSCLLSYHFNQHSTSPSPPPIYLLKVWCV 140

Query: 121 DRKGLLH 127
           D+KGLLH
Sbjct: 141 DQKGLLH 147


>Glyma19g36910.2 
          Length = 384

 Score =  132 bits (331), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 71/130 (54%), Positives = 81/130 (62%), Gaps = 9/130 (6%)

Query: 1   MGIPTSDDVVLIQHAKTSADPSVVTVNCPDKAGLGCDLCRIILEFGLSITRADFSTDGRW 60
           MGI   DDVV+I  A+     +V+TVNCPDK GLGCDLCRIIL FGLSI R D STDG+W
Sbjct: 1   MGI-LHDDVVIIGEAEKEGKATVITVNCPDKTGLGCDLCRIILFFGLSIVRGDVSTDGKW 59

Query: 61  CYIVFWVVPDSTSSSHKLDWDSLKNRLSFASPPCLIP---FYFDQKSNGPSLPPLYLLKF 117
           CYIVFWVV        +  W  LK RL  A P C       Y+  +   P  P ++LLKF
Sbjct: 60  CYIVFWVV-----GKQRARWSLLKKRLIEACPSCSSASGISYYRSELQPPKPPDVFLLKF 114

Query: 118 CFVDRKGLLH 127
           C  DRKGLLH
Sbjct: 115 CCHDRKGLLH 124


>Glyma19g36910.1 
          Length = 412

 Score =  132 bits (331), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 71/130 (54%), Positives = 81/130 (62%), Gaps = 9/130 (6%)

Query: 1   MGIPTSDDVVLIQHAKTSADPSVVTVNCPDKAGLGCDLCRIILEFGLSITRADFSTDGRW 60
           MGI   DDVV+I  A+     +V+TVNCPDK GLGCDLCRIIL FGLSI R D STDG+W
Sbjct: 1   MGI-LHDDVVIIGEAEKEGKATVITVNCPDKTGLGCDLCRIILFFGLSIVRGDVSTDGKW 59

Query: 61  CYIVFWVVPDSTSSSHKLDWDSLKNRLSFASPPCLIP---FYFDQKSNGPSLPPLYLLKF 117
           CYIVFWVV        +  W  LK RL  A P C       Y+  +   P  P ++LLKF
Sbjct: 60  CYIVFWVV-----GKQRARWSLLKKRLIEACPSCSSASGISYYRSELQPPKPPDVFLLKF 114

Query: 118 CFVDRKGLLH 127
           C  DRKGLLH
Sbjct: 115 CCHDRKGLLH 124


>Glyma03g34210.1 
          Length = 407

 Score =  130 bits (328), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 69/130 (53%), Positives = 82/130 (63%), Gaps = 9/130 (6%)

Query: 1   MGIPTSDDVVLIQHAKTSADPSVVTVNCPDKAGLGCDLCRIILEFGLSITRADFSTDGRW 60
           MGI   DDVV+I+  +   + +V+TVNCPDK GLGCDLCRIIL FGLSI R D STDG+W
Sbjct: 1   MGI-LHDDVVIIREPEKEGEATVITVNCPDKTGLGCDLCRIILFFGLSIVRGDVSTDGKW 59

Query: 61  CYIVFWVVPDSTSSSHKLDWDSLKNRLSFASPPCLIP---FYFDQKSNGPSLPPLYLLKF 117
           CYIVFWVV        ++ W  LK RL  A P C       Y+  +   P  P ++LL F
Sbjct: 60  CYIVFWVV-----GKQRMRWSLLKKRLIEACPTCSSASGISYYRSELQPPKPPNVFLLTF 114

Query: 118 CFVDRKGLLH 127
           C  DRKGLLH
Sbjct: 115 CCHDRKGLLH 124


>Glyma15g04510.1 
          Length = 424

 Score =  130 bits (328), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 64/116 (55%), Positives = 75/116 (64%), Gaps = 2/116 (1%)

Query: 12  IQHAKTSADPSVVTVNCPDKAGLGCDLCRIILEFGLSITRADFSTDGRWCYIVFWVVPDS 71
           IQ      DP ++TVNCPDK GL CD+CRIIL+FGL I + D STDG WCYIV WV+P S
Sbjct: 15  IQQPNKPGDPFIITVNCPDKTGLACDICRIILDFGLCIAKGDVSTDGVWCYIVLWVIPYS 74

Query: 72  TSSSHKLDWDSLKNRLSFASPPCLIPFYFDQKSNGPSLPPLYLLKFCFVDRKGLLH 127
                   +  LK RL    PPCL  FY  Q+ +  S  P+YLLKFC +DRKGLLH
Sbjct: 75  VLLPMSCSYLILKERLQKICPPCLASFYVIQQPSRSS--PVYLLKFCCLDRKGLLH 128


>Glyma13g20840.1 
          Length = 412

 Score =  122 bits (305), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 69/132 (52%), Positives = 84/132 (63%), Gaps = 13/132 (9%)

Query: 1   MGIPTSDDVVLIQHAKTSADPSVVTVNCPDKAGLGCDLCRIILEFGLSITRADFSTDGRW 60
           MGI   DDVV+I   +   DP+++TVNCPDK GLGCDLCRIIL FGL+I R D STDG+W
Sbjct: 1   MGI-LYDDVVIISPPEKDGDPTLLTVNCPDKTGLGCDLCRIILFFGLNILRGDVSTDGKW 59

Query: 61  CYIVFWVVPDSTSSSHKLDWDSLKNRL-----SFASPPCLIPFYFDQKSNGPSLPPLYLL 115
           CYIVFWVV        +  W  LK RL     SF+S   +  +  D + + PS   ++LL
Sbjct: 60  CYIVFWVV-----GKQRTRWSLLKKRLIEACPSFSSASGISYYRSDLQPSKPS--DVFLL 112

Query: 116 KFCFVDRKGLLH 127
            FC  DRKGLLH
Sbjct: 113 NFCCHDRKGLLH 124


>Glyma10g06630.1 
          Length = 387

 Score =  120 bits (301), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 69/134 (51%), Positives = 84/134 (62%), Gaps = 13/134 (9%)

Query: 1   MGIPTSDDVVLIQHAKTSADPSVVTVNCPDKAGLGCDLCRIILEFGLSITRADFSTDGRW 60
           MGI   DDVV+I+  +   DP+++TVNCPDK GLGCDLCRI+L FGL+I R D STDG+W
Sbjct: 1   MGI-LYDDVVIIRPPEKDGDPTLLTVNCPDKTGLGCDLCRIMLFFGLNIIRGDVSTDGKW 59

Query: 61  CYIVFWVVPDSTSSSHKLDWDSLKNRLSFASPPCL----IPFYFDQKSNGPSLPP-LYLL 115
           CYIVFWVV        +  W  LK RL  A P C     I +Y  +    PS P  ++LL
Sbjct: 60  CYIVFWVV-----GKQRTRWSLLKKRLIEACPSCSSASGISYY--RSDLQPSKPSDVFLL 112

Query: 116 KFCFVDRKGLLHGN 129
            F   DRKGLLH +
Sbjct: 113 NFSCHDRKGLLHAD 126


>Glyma13g40950.1 
          Length = 396

 Score =  116 bits (291), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 58/112 (51%), Positives = 68/112 (60%), Gaps = 2/112 (1%)

Query: 7   DDVVLIQHAKTSADPSVVTVNCPDKAGLGCDLCRIILEFGLSITRADFSTDGRWCYIVFW 66
           DD V I       DP ++T NCPDK GL CD+CRIIL+FGL IT+ D STDG WCY V W
Sbjct: 2   DDFVQIHQPNKPGDPFIITFNCPDKTGLACDICRIILDFGLCITKGDVSTDGVWCYFVLW 61

Query: 67  VVPDSTSSSHKLDWDSLKNRLSFASPPCLIPFYFDQKSNGPSLPPLYLLKFC 118
           V+P S        +  LK RL    PPCL  FY  Q+ +  S  P+YLLKFC
Sbjct: 62  VIPHSVLLPITCSYLILKERLQEICPPCLASFYIIQQPSRSS--PVYLLKFC 111