Jatropha Genome Database

JcCA0282441.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0282441.10 + phase: 2 /pseudo/partial
         (279 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g52290.1                                                       259   3e-69
Glyma02g10570.1                                                       257   1e-68
Glyma10g43710.1                                                       256   1e-68
Glyma20g38400.1                                                       256   2e-68
Glyma08g17200.1                                                        74   2e-13
Glyma15g41990.1                                                        72   7e-13
Glyma08g16970.1                                                        68   1e-11

>Glyma18g52290.1 
          Length = 565

 Score =  259 bits (662), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 129/255 (50%), Positives = 160/255 (62%), Gaps = 24/255 (9%)

Query: 1   GKGYPSLWPSKDCKQPLDVSNEFTFKVIDGILSDFSXXXXXXXXHLGGDEVDTSCWSSTS 60
           G GYP LWPS  C++PLDVS  FTF VI GIL+D          HLGGDEV+T CWSSTS
Sbjct: 308 GAGYPDLWPSPYCREPLDVSKNFTFDVISGILADMRKLFPFELFHLGGDEVNTDCWSSTS 367

Query: 61  RIQKWLEKHGMNASQAYQYFVLRAQKIALSHGYEIINWEETFNNFGNKLSRKTVVHNXAD 120
            +++WL+ H M    AYQYFVL+AQ++A+S  +  +NWEETFN F +KL  KT+VHN   
Sbjct: 368 HVKEWLQSHNMTTRDAYQYFVLKAQEMAVSKNWSPVNWEETFNTFPSKLHPKTIVHNWLG 427

Query: 121 PLTDHREIHYLVCSAYNFPCRLXXXXXXXXXXXXLRCIVSNQDKWYLDHLDTSWEKFYMN 180
           P          VC                      RCI SNQ  WYLDHLD  W++ Y  
Sbjct: 428 P---------GVCP--------------KVVAKGFRCIYSNQGVWYLDHLDVPWDEVYTA 464

Query: 181 EPLANINDTEQQQLVIGGEVCMWGEMVDGSDIEQTIWPRAAAAAERLWTPYDKLAKDPTH 240
           EPL  I+   +Q+LVIGGEVCMWGE  D S+++QTIWPRAAAAAERLW+  D  +++ T 
Sbjct: 465 EPLQGIHTASEQELVIGGEVCMWGETADTSNVQQTIWPRAAAAAERLWSQRDSTSQNITL 524

Query: 241 VT-RRLAHFRCLLNQ 254
           +   RL +FRCLLN+
Sbjct: 525 IALPRLQNFRCLLNR 539


>Glyma02g10570.1 
          Length = 555

 Score =  257 bits (656), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 128/255 (50%), Positives = 159/255 (62%), Gaps = 24/255 (9%)

Query: 1   GKGYPSLWPSKDCKQPLDVSNEFTFKVIDGILSDFSXXXXXXXXHLGGDEVDTSCWSSTS 60
           G GYP LWPS  C++PLDVS  FTF VI GIL+D          HLGGDEV+T CWSSTS
Sbjct: 298 GAGYPDLWPSPYCREPLDVSKNFTFDVISGILTDMRKIFPFELFHLGGDEVNTDCWSSTS 357

Query: 61  RIQKWLEKHGMNASQAYQYFVLRAQKIALSHGYEIINWEETFNNFGNKLSRKTVVHNXAD 120
            +++WL+ H M    AYQYFVL+AQ++A+S  +  +NWEETFN F +KL   T+VHN   
Sbjct: 358 HVKEWLQSHNMTTRDAYQYFVLKAQEMAVSKNWSPVNWEETFNTFPSKLHPNTIVHNWLG 417

Query: 121 PLTDHREIHYLVCSAYNFPCRLXXXXXXXXXXXXLRCIVSNQDKWYLDHLDTSWEKFYMN 180
           P          VC                      RCI SNQ  WYLDHLD  W++ Y  
Sbjct: 418 P---------GVCP--------------KVVAKGFRCIYSNQGVWYLDHLDVPWDEVYTT 454

Query: 181 EPLANINDTEQQQLVIGGEVCMWGEMVDGSDIEQTIWPRAAAAAERLWTPYDKLAKDPTH 240
           EPL  I+   +Q+LVIGGEVCMWGE  D S+++QTIWPRAAAAAERLW+  D  +++ T 
Sbjct: 455 EPLQGIHIASEQELVIGGEVCMWGETADTSNVQQTIWPRAAAAAERLWSQRDSTSQNITL 514

Query: 241 VT-RRLAHFRCLLNQ 254
           +   RL +FRCLLN+
Sbjct: 515 IALPRLLNFRCLLNR 529


>Glyma10g43710.1 
          Length = 536

 Score =  256 bits (655), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 129/255 (50%), Positives = 154/255 (60%), Gaps = 24/255 (9%)

Query: 1   GKGYPSLWPSKDCKQPLDVSNEFTFKVIDGILSDFSXXXXXXXXHLGGDEVDTSCWSSTS 60
           G GYP LWPS  CK+PLDVS +FTF V+ GIL+D          HLGGDEV+T CW++TS
Sbjct: 279 GIGYPDLWPSPSCKEPLDVSKKFTFDVLSGILTDMRKIFPFELFHLGGDEVNTDCWTNTS 338

Query: 61  RIQKWLEKHGMNASQAYQYFVLRAQKIALSHGYEIINWEETFNNFGNKLSRKTVVHNXAD 120
            + KWL  H M A  AYQYFVL+AQ IAL+  +  +NWEETFN F  KL  +TVVHN   
Sbjct: 339 TVNKWLRNHNMTAKDAYQYFVLKAQNIALTKNWSPVNWEETFNTFPTKLHPRTVVHNWLG 398

Query: 121 PLTDHREIHYLVCSAYNFPCRLXXXXXXXXXXXXLRCIVSNQDKWYLDHLDTSWEKFYMN 180
           P          VC                      RCI SNQ  WYLDHLD  W+  Y  
Sbjct: 399 P---------GVCP--------------KAVAKGFRCIFSNQGVWYLDHLDVPWDDVYTA 435

Query: 181 EPLANINDTEQQQLVIGGEVCMWGEMVDGSDIEQTIWPRAAAAAERLWTPYDKLAKDPTH 240
           EPL  I    +Q+LV+GGEVCMWGE  D SD++QTIWPRAAAAAERLW+  D  + +   
Sbjct: 436 EPLEGIRKASEQKLVLGGEVCMWGETADTSDVQQTIWPRAAAAAERLWSRRDSTSGNVNI 495

Query: 241 VT-RRLAHFRCLLNQ 254
           +   RL +FRCLLN+
Sbjct: 496 IALPRLHYFRCLLNR 510


>Glyma20g38400.1 
          Length = 526

 Score =  256 bits (654), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 127/255 (49%), Positives = 156/255 (61%), Gaps = 24/255 (9%)

Query: 1   GKGYPSLWPSKDCKQPLDVSNEFTFKVIDGILSDFSXXXXXXXXHLGGDEVDTSCWSSTS 60
           G GYP+LWPS  CK+PLDVS +FTF V+ GIL+D          HLGGDEV+T CWS+TS
Sbjct: 269 GVGYPNLWPSPSCKEPLDVSKKFTFDVLSGILTDMRKIFPFELFHLGGDEVNTDCWSNTS 328

Query: 61  RIQKWLEKHGMNASQAYQYFVLRAQKIALSHGYEIINWEETFNNFGNKLSRKTVVHNXAD 120
            + KWL  H M A  AYQYFVL+AQ IAL+  +  +NWEETFN F  KL  +TVVHN   
Sbjct: 329 TVSKWLRNHNMTAKDAYQYFVLKAQNIALTKNWSPVNWEETFNTFPTKLHPRTVVHNWLG 388

Query: 121 PLTDHREIHYLVCSAYNFPCRLXXXXXXXXXXXXLRCIVSNQDKWYLDHLDTSWEKFYMN 180
           P    + +                           RCI SNQ  WYL++L+  W+  Y  
Sbjct: 389 PGVCPKAV-----------------------AKGFRCIFSNQGVWYLNYLNVPWDDVYTA 425

Query: 181 EPLANINDTEQQQLVIGGEVCMWGEMVDGSDIEQTIWPRAAAAAERLWTPYDKLAKDPTH 240
           EPL  I    +Q+LV+GGEVCMWGE  D SDI+QTIWPRAAAAAERLW+  D  + +   
Sbjct: 426 EPLEGIRKASEQKLVLGGEVCMWGETADTSDIQQTIWPRAAAAAERLWSQRDSTSGNANI 485

Query: 241 VT-RRLAHFRCLLNQ 254
           +  RRL +FRCLLN+
Sbjct: 486 IALRRLHYFRCLLNR 500


>Glyma08g17200.1 
          Length = 578

 Score = 73.9 bits (180), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 70/271 (25%), Positives = 107/271 (39%), Gaps = 58/271 (21%)

Query: 17  LDVSNEFTFKVIDGILSDFSXXXXXXXXHLGGDEVDTSCWSSTSRIQKWLEKHGMNASQA 76
           L+  N  T++V+  ++ D +        H G DE+   CW +   IQK+L   G   SQ 
Sbjct: 305 LNPLNPKTYQVLKNVIRDMTTLFPEPFYHSGADEIVPGCWKTDPTIQKYLSNGG-TLSQV 363

Query: 77  YQYFVLRAQKIALSHGYEIINWE-----ETFNNFGNKLSRKTVVHNXADPLTDHREIHYL 131
            + F+       +S    ++ WE     ET +     L ++ VV    +    H     +
Sbjct: 364 LEKFINNTLPFIVSLNRTVVYWEDVLLSETVHVPSTILPKEHVVLQTWN--NGHNNTKRI 421

Query: 132 VCSAYNFPCRLXXXXXXXXXXXXLRCIVSNQDKWYLD--HLD------------------ 171
           V S Y                   R IVS+ D +YLD  H D                  
Sbjct: 422 VSSGY-------------------RTIVSSSDFYYLDCGHGDFVGNNSIYDQQNGDNKDN 462

Query: 172 --------TSWEKFYMNEPLANINDTEQQQLVIGGEVCMWGEMVDGSDIEQTIWPRAAAA 223
                    +W+  Y N  +A     E+ +LV+GGEV +W E  D + ++  IWPR +A 
Sbjct: 463 GGSWCGPFKTWQTIY-NYDIAYGLSEEEAKLVLGGEVALWTEQADSTVLDGRIWPRTSAL 521

Query: 224 AERLWTPY--DKLAKDPTHVTRRLAHFRCLL 252
           AE LW+    +K  K     T RL  +R  +
Sbjct: 522 AESLWSGNRDEKGMKRYAEATDRLNEWRSRM 552


>Glyma15g41990.1 
          Length = 534

 Score = 72.0 bits (175), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 69/271 (25%), Positives = 110/271 (40%), Gaps = 58/271 (21%)

Query: 17  LDVSNEFTFKVIDGILSDFSXXXXXXXXHLGGDEVDTSCWSSTSRIQKWLEKHGMNASQA 76
           L+  N  T++V+  ++ D +        H G DE+   CW +   IQK+L  +G   SQ 
Sbjct: 263 LNPLNPKTYQVLKNVIRDTTTLFPEPFYHSGADEIVPGCWKTDPTIQKYL-SNGGTLSQV 321

Query: 77  YQYFVLRAQKIALSHGYEIINWE-----ETFNNFGNKLSRKTVVHNXADPLTDHREIHYL 131
            + F+       +S    ++ WE     ET +     L ++ VV    +    H     +
Sbjct: 322 LEKFINNTLPFIVSLNRTVVYWEDVLLSETVHVPSTILPKEHVVLQTWN--NGHNNTKRI 379

Query: 132 VCSAYNFPCRLXXXXXXXXXXXXLRCIVSNQDKWYLD-------------------HLDT 172
           V S Y                   R IVS+ D +YLD                     D+
Sbjct: 380 VSSGY-------------------RAIVSSSDFYYLDCGHGGFVGNNSIYDQQNGGDKDS 420

Query: 173 ---------SWEKFYMNEPLANINDTEQQQLVIGGEVCMWGEMVDGSDIEQTIWPRAAAA 223
                    +W+  Y N  +A     E+++LV+GGEV +W E  D + ++  IWPR++A 
Sbjct: 421 GGSWCGPFKTWQTIY-NYDIAYGLSEEEEKLVLGGEVALWTEQADSTVLDGRIWPRSSAL 479

Query: 224 AERLWTPY--DKLAKDPTHVTRRLAHFRCLL 252
           AE LW+    +K  K     T RL  +R  +
Sbjct: 480 AESLWSENRDEKGMKRYAEATDRLNEWRSRM 510


>Glyma08g16970.1 
          Length = 585

 Score = 68.2 bits (165), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 58/253 (22%), Positives = 101/253 (39%), Gaps = 49/253 (19%)

Query: 8   WPSKDCKQP----LDVSNEFTFKVIDGILSDFSXXXXXXXXHLGGDEVDTSCWSSTSRIQ 63
           WP +   QP    L+  N  T++V+  ++ D +        H G DE+   CW +   IQ
Sbjct: 298 WPHRFASQPGTGHLNPLNPKTYQVLKNVIHDITTLFPEPFFHSGTDEIVPGCWKTDPAIQ 357

Query: 64  KWLEKHGMNASQAYQYFVLRAQKIALSHGYEIINWEETFNNFGNKLSRKTVVHNXADPLT 123
           K+L   G   +Q  + ++       +S  + ++ WE+             +VH  +  L 
Sbjct: 358 KYLSNGG-TLNQLLEKYINNTLPFIVSLNHTVVFWEDVL--------LDNIVHVPSAILP 408

Query: 124 DHREIHYLVCSAYNFPCRLXXXXXXXXXXXXLRCIVSNQDKWYLDHLDTS---------- 173
               I     + +N   ++             R IVS+ + +YLD    S          
Sbjct: 409 KEHVILQTWHNGHNHTKKIVSAG--------YRTIVSSAEFYYLDCGHGSYVGNNSAYDN 460

Query: 174 -----------------WEKFYMNEPLANINDTEQQQLVIGGEVCMWGEMVDGSDIEQTI 216
                            W+  Y  +    +++ E + LV+GGEV +W E  D + ++  I
Sbjct: 461 QDGDMGNGGSWCAPFKTWQTIYNYDIAYGLSEGEAK-LVLGGEVALWSEQSDPTVLDARI 519

Query: 217 WPRAAAAAERLWT 229
           WPRA+A AE +W+
Sbjct: 520 WPRASALAESMWS 532