Jatropha Genome Database

JcCA0281201.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0281201.10 - phase: 0 /partial
         (374 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma07g26240.1                                                       442   e-124

>Glyma07g26240.1 
          Length = 464

 Score =  442 bits (1136), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 221/342 (64%), Positives = 257/342 (75%), Gaps = 17/342 (4%)

Query: 34  EENRCKFWLTRKNRFCANGRLNDSPFCGNHKSRSDGQWIPCPIDPSHSVLKENLDGHVTR 93
           E  RC FWL  KNRFCAN  LN S FCGNH SRS GQWIPCPIDPSHSVLK+NL GHV R
Sbjct: 2   ETKRCNFWLPNKNRFCANCPLNGSLFCGNHNSRSQGQWIPCPIDPSHSVLKQNLKGHVKR 61

Query: 94  CPLLKQTQCLSLQPFYQKGINAGKEEEED-------------ITSEMKRNAIYGMTVSEF 140
           CPLLKQ Q LS QPFY KGINAG + EE+             ++SEMKRN ++ M+V+EF
Sbjct: 62  CPLLKQVQSLSDQPFYDKGINAGSDGEEETSGVDDSRLPTMTVSSEMKRNTLHEMSVAEF 121

Query: 141 CKLIKKIESIHALICKDIVESYKMPEACNVWIRREIDRKLPFQEKHVKQQASILGNLEDF 200
           C LI+KIE +H  +CKDI +S +MPE C +WI+R  DRKLPFQEKH+ QQASI+GNLE+F
Sbjct: 122 CNLIEKIEFLHESLCKDIEDSVQMPEVCRLWIKRVGDRKLPFQEKHIMQQASIVGNLENF 181

Query: 201 GALKSYSEKEQ--CDGEGLYLDNAAPAVVEFGAGRGYLTQMLADCYGIQMVFLVERKSYK 258
           G LK+   + Q  C       +    AV+EFGAGRGYLTQMLADCYGI+ VFLVERK+YK
Sbjct: 182 GVLKNSLRRNQSECVEPVEKKEKDVLAVIEFGAGRGYLTQMLADCYGIKKVFLVERKAYK 241

Query: 259 LKADRSLRQKDNLTLERLRIDIEDLNLNAVESLLGLPFLAIGKHLCGPATDLTLRCCLPE 318
           LKADRSLRQ ++L LERLRIDIEDL+LNAVESL G+P+LA GKHLCG ATDLTLRCC PE
Sbjct: 242 LKADRSLRQNESLMLERLRIDIEDLDLNAVESLQGVPYLATGKHLCGAATDLTLRCCFPE 301

Query: 319 QSSETTMEKCSVNHSLKGLAIATCCHHLCQWKHYTSNCHYFL 360
              +++ +  + N    GLAIATCCHHLCQWKHY  N  +FL
Sbjct: 302 YREDSSGQY-TANSKFGGLAIATCCHHLCQWKHYI-NKRFFL 341