Jatropha Genome Database

JcCA0280911.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0280911.10 - phase: 0 
         (203 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma03g37670.1                                                       180   7e-46
Glyma19g40280.2                                                       176   1e-44
Glyma19g40280.1                                                       174   6e-44

>Glyma03g37670.1 
          Length = 214

 Score =  180 bits (457), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 101/204 (49%), Positives = 126/204 (61%), Gaps = 28/204 (13%)

Query: 1   MFYLSLVEHTXXXXXXXXXXXXDDAIKKELENIFLDKTMEVVFVMKVISNLGLCISIYDL 60
           MFYLS +EH              +AI  ELE +FLDK         VI+NLGLCIS+YD+
Sbjct: 1   MFYLSKIEHKLPLPPSRFVLPIREAIHMELEKLFLDK---------VIANLGLCISVYDI 51

Query: 61  RNIEGGFIFPGDGASTYTVKFRMVVFRPFVGETIVAKLKESKEDGLRLSLGFFDDIHIPA 120
           R+I+GGFIFPGDGA TYTV F +++FRPF  E I A+L  S  DGLRL++GFFDDI+IPA
Sbjct: 52  RSIDGGFIFPGDGAPTYTVVFNLIMFRPFEKEIITARLLSSDADGLRLTIGFFDDIYIPA 111

Query: 121 HRLPKPCHFVPNSEKR-----DEVT---------WIWDYPGNEDAVFSIDGIDEIKFKVD 166
            RLP P HFV   +K+      E T         W WDY   E   + I   D IKF+V 
Sbjct: 112 SRLPDPNHFVETEQKKRVFSGQESTTNSSSKKGVWYWDYNEQE---YPIQDTDVIKFRVT 168

Query: 167 SVKYPPVPLEQ--QEKPFAPMMIT 188
           +V YP +P+EQ  + KPFAPM+I+
Sbjct: 169 NVSYPQIPVEQPKESKPFAPMLIS 192


>Glyma19g40280.2 
          Length = 194

 Score =  176 bits (447), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 98/205 (47%), Positives = 125/205 (60%), Gaps = 30/205 (14%)

Query: 1   MFYLSLVEHTXXXXXXXXXXXXDDAIKKELENIFLDKTMEVVFVMKVISNLGLCISIYDL 60
           MFYLS +EH              +AI  ELE +FLDK         VI+NLGLCIS+YD+
Sbjct: 1   MFYLSKIEHELPLPPSRLVLPIREAIHMELEKLFLDK---------VIANLGLCISVYDI 51

Query: 61  RNIEGGFIFPGDGASTYTVKFRMVVFRPFVGETIVAKLKESKEDGLRLSLGFFDDIHIPA 120
           R+I+GGFIFPGDGA TYTV F +++FRPF  E I A+L  S  DGLRL++GF+DDI+IPA
Sbjct: 52  RSIDGGFIFPGDGAPTYTVVFNLIMFRPFEKEIITARLLSSDADGLRLTIGFYDDIYIPA 111

Query: 121 HRLPKPCHFVPNSEKR-----DEVT---------WIWDYPGNEDAVFSIDGIDEIKFKVD 166
            RLP P HFV    K+      E T         W WDY   E  +      D IKF+V 
Sbjct: 112 SRLPDPNHFVETEPKKRVSSGQESTANPSSKKGMWYWDYDEQEYPI-----TDVIKFRVT 166

Query: 167 SVKYPPVPLEQ--QEKPFAPMMITV 189
           +V YP +P+EQ  + KPFAPM++++
Sbjct: 167 NVSYPQIPVEQPKESKPFAPMLVSM 191


>Glyma19g40280.1 
          Length = 212

 Score =  174 bits (441), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 98/204 (48%), Positives = 124/204 (60%), Gaps = 30/204 (14%)

Query: 1   MFYLSLVEHTXXXXXXXXXXXXDDAIKKELENIFLDKTMEVVFVMKVISNLGLCISIYDL 60
           MFYLS +EH              +AI  ELE +FLDK         VI+NLGLCIS+YD+
Sbjct: 1   MFYLSKIEHELPLPPSRLVLPIREAIHMELEKLFLDK---------VIANLGLCISVYDI 51

Query: 61  RNIEGGFIFPGDGASTYTVKFRMVVFRPFVGETIVAKLKESKEDGLRLSLGFFDDIHIPA 120
           R+I+GGFIFPGDGA TYTV F +++FRPF  E I A+L  S  DGLRL++GF+DDI+IPA
Sbjct: 52  RSIDGGFIFPGDGAPTYTVVFNLIMFRPFEKEIITARLLSSDADGLRLTIGFYDDIYIPA 111

Query: 121 HRLPKPCHFVPNSEKR-----DEVT---------WIWDYPGNEDAVFSIDGIDEIKFKVD 166
            RLP P HFV    K+      E T         W WDY   E  +      D IKF+V 
Sbjct: 112 SRLPDPNHFVETEPKKRVSSGQESTANPSSKKGMWYWDYDEQEYPI-----TDVIKFRVT 166

Query: 167 SVKYPPVPLEQ--QEKPFAPMMIT 188
           +V YP +P+EQ  + KPFAPM+++
Sbjct: 167 NVSYPQIPVEQPKESKPFAPMLVS 190