Jatropha Genome Database

JcCA0279081.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0279081.10 - phase: 0 
         (299 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma19g38060.1                                                       168   6e-42
Glyma10g08540.1                                                       153   2e-37
Glyma03g35430.1                                                       151   8e-37
Glyma13g22200.1                                                       149   5e-36

>Glyma19g38060.1 
          Length = 229

 Score =  168 bits (426), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 103/230 (44%), Positives = 126/230 (54%), Gaps = 23/230 (10%)

Query: 4   VDLETLVSACAGVSCDRKIACETLATTTTASDNHNQQPQDSETXXXXXXXXXXXXSFWLS 63
           + +E+LVSACAG S DRKIACETLA     +D     P                 SFWLS
Sbjct: 2   LQVESLVSACAGGSSDRKIACETLADDVHPTDPPESHPD------------SPPESFWLS 49

Query: 64  KDAEYDWFDRNAFIERKDSTKGNNSHSANLNPNIIPHSGIQSNSQRFS-NLKSKAS-ILG 121
           +D EYDW+DRNA  ERK+STK +N++S NLNP I       +NSQRFS N KSKAS I+G
Sbjct: 50  RDEEYDWWDRNAVYERKESTKASNNNSTNLNPGI----NSSNNSQRFSLNFKSKASTIIG 105

Query: 122 LPKPQKSCFVEA---RRYCKPGKTRLFPKRXXXXXXXXXXLIEPSSPKVSCMXXXXXXXX 178
           LPKPQK+ FV+    R + KP   RLFPKR          L+EPSSPKVSCM        
Sbjct: 106 LPKPQKTSFVDVKNRRNHNKPSNIRLFPKRSVSVGKSESGLVEPSSPKVSCM--GRVRSK 163

Query: 179 XXXXXXXXXXXXXXXETDNKREKVERKQRTGFFSTFRAIFRVTKHNTRNR 228
                          +TD K +     ++ GFF +FR+IFR+ K     R
Sbjct: 164 RDRNRKLRSSRKSSPDTDAKEKHSRSGKKPGFFESFRSIFRLAKQRVGER 213


>Glyma10g08540.1 
          Length = 304

 Score =  153 bits (386), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 123/315 (39%), Positives = 155/315 (49%), Gaps = 42/315 (13%)

Query: 1   MPQVDLETLVSACAGVSCDRKIACETLATTTTASDNHNQQPQDSETXXXXXXXXXXXXSF 60
           MPQ+DLETLVSACAG   D+KIACE  A       +H  +  DS              SF
Sbjct: 1   MPQMDLETLVSACAGGCSDQKIACEPHAD----EGDHGGRLPDSPPE-----------SF 45

Query: 61  WLSKDAEYDWFDRNAFIERKDSTKGNNSHSANLNPNIIPHSGIQSNSQRFS-NLKSKASI 119
           WLS DAEYDW+DRNA  ER +STKGN     ++  +   +S   +NSQRFS NLKSKA+I
Sbjct: 46  WLSGDAEYDWWDRNAVYERNESTKGN-----SIISSTNLNSNSNNNSQRFSKNLKSKAAI 100

Query: 120 LGLPKPQKSCFVEA---RRYCKPGKTRLFPKRXXXXXXX-XXXLIEPSSPKVSCMXXXXX 175
           +GLPKPQK+ F +A   R +  PG  RLFPKR           ++EPSSPKVSC+     
Sbjct: 101 IGLPKPQKATFADAKSRRNHRPPGNARLFPKRSASVGGKLEGSVVEPSSPKVSCIGRVRS 160

Query: 176 XXXXXXXXXXXXXXXXXXETDNK----------REKVERKQR--TGFFSTFRAIFRVTKH 223
                                            R+K  R QR  TGFF + RAIFR  + 
Sbjct: 161 KRDRNRRLRTRQRSISSSTATAATTGSISSAVTRQKSTRSQRKKTGFFESVRAIFRHGRR 220

Query: 224 NTRNRKDGSLSRQGSTAKTTITDIRDRLPAGERDSQPRKSVDS---DGFEPAAGTEPVGL 280
               +K        S++K        +   G   S      D+   + F  AA   P GL
Sbjct: 221 GKPVQKPDLPQEDSSSSKMKKKRSYGKKARGSTTSSTTNRNDASFEESFSSAA--PPPGL 278

Query: 281 GAMKRFASGRKSDSW 295
           G++ RFASGR+S+SW
Sbjct: 279 GSVNRFASGRRSESW 293


>Glyma03g35430.1 
          Length = 271

 Score =  151 bits (382), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 113/306 (36%), Positives = 141/306 (46%), Gaps = 64/306 (20%)

Query: 3   QVDLETLVSACAGVSCDRKIACETLATTTTASDNHNQQPQDSETXXXXXXXXXXXXSFWL 62
            + +E+LVSACAG S DRKIACETL+         N  P    T            SFWL
Sbjct: 1   MLQVESLVSACAGGSSDRKIACETLSD--------NVHP----TDPPEPHPDSPPESFWL 48

Query: 63  SKDAEYDWFDRNAFIERKDSTKGNNSHSANLNPNIIPHSGIQSNSQRFSNLKSKAS-ILG 121
           S+D EYDW+DRNA  ERK+ST                              KSKAS I+G
Sbjct: 49  SRDEEYDWWDRNAVYERKEST------------------------------KSKASTIIG 78

Query: 122 LPKPQKSCFVEA---RRYCKPGKTRLFPKRXXXXXXXXXXLIEPSSPKVSCMXXXXXXXX 178
           LPKPQK+ FV+A   R + KP   RLFPKR           +EPSSPKVSCM        
Sbjct: 79  LPKPQKTSFVDAKNRRNHNKPSNIRLFPKRSVSVGKSESGFVEPSSPKVSCM--GRVRSK 136

Query: 179 XXXXXXXXXXXXXXXETDNKREKVERKQRTGFFSTFRAIFRVTKHNTRNRKDGSLSRQGS 238
                           TD K +     ++ GFF +FR+IFR  + +  +RK   L     
Sbjct: 137 RDRNRKLRSSRKSSPNTDAKEKPNRNGKKYGFFESFRSIFRSGRKDKSDRKKTDL----- 191

Query: 239 TAKTTITDIRDRLPAGERDSQPRKSVDSDG----FEP-----AAGTEPVGLGAMKRFASG 289
               T ++I  +  A    S+ R S  S       EP      + +EP GLG M RFASG
Sbjct: 192 --LATDSNIETKSGAINYSSRARHSTSSLNEVSLEEPVSRNSVSESEPPGLGGMMRFASG 249

Query: 290 RKSDSW 295
           R+S+SW
Sbjct: 250 RRSESW 255


>Glyma13g22200.1 
          Length = 303

 Score =  149 bits (375), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 117/315 (37%), Positives = 149/315 (47%), Gaps = 43/315 (13%)

Query: 1   MPQVDLETLVSACAGVSCDRKIACETLATTTTASDNHNQQPQDSETXXXXXXXXXXXXSF 60
           MPQVDLETLVSACAG   D+KIA E         D+H   P                 SF
Sbjct: 1   MPQVDLETLVSACAGGCSDQKIAYEPHVDD---GDHHPDSP---------------PASF 42

Query: 61  WLSKDAEYDWFDRNAFIERKDSTKGNNSHSANLNPNIIPHSGIQSNSQRFS-NLKSKASI 119
           WLS DAEYDW+DRNA  +R +STKGN     ++  +   ++   +NSQRFS NLKSKA+I
Sbjct: 43  WLSGDAEYDWWDRNAVYQRNESTKGN-----SIVSSTNLNANSNNNSQRFSKNLKSKAAI 97

Query: 120 LGLPKPQKSCFVEA---RRYCKPGKTRLFPKRXXXXXXX-XXXLIEPSSPKVSCMXXXXX 175
           +GLPKPQK+ F +A   R +  PG  RLFPKR           + EPSSPKVSC+     
Sbjct: 98  IGLPKPQKASFADASSRRNHRPPGNARLFPKRSASVGGKLENSVAEPSSPKVSCIGRVRS 157

Query: 176 XXXXXXXXXXXXXXXXXXETDNK-----------REKVERKQR--TGFFSTFRAIFRVTK 222
                              T              R+K  R QR  TGFF + R IFR  +
Sbjct: 158 KRDRNRRLRTRQRSISSTATATTASTSIAAAVVTRQKSTRSQRKKTGFFESVREIFRSGR 217

Query: 223 HNTRNRKDGSLSRQGSTAKTTITDIRDRLPAGERDSQPRKSVDSDGFEP--AAGTEPVGL 280
                +K         ++            A    +   +S +   FE   ++   P GL
Sbjct: 218 RGKPVQKPDLPQEDSLSSSKKKKKRSLGKKAWGSTTGSTRSRNDASFEESVSSAAAPPGL 277

Query: 281 GAMKRFASGRKSDSW 295
           G+M RFASGR+S+SW
Sbjct: 278 GSMNRFASGRRSESW 292