Jatropha Genome Database

JcCA0278721.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0278721.10 + phase: 1 /partial
         (96 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma14g37190.1                                                       140   4e-34
Glyma02g39110.1                                                       134   1e-32
Glyma14g37210.1                                                       125   1e-29
Glyma02g39120.1                                                        69   8e-13
Glyma09g33130.1                                                        57   3e-09
Glyma16g22500.1                                                        57   4e-09

>Glyma14g37190.1 
          Length = 322

 Score =  140 bits (352), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 63/83 (75%), Positives = 74/83 (89%)

Query: 1   CKSIAARVKDGLIEPEDITESLIEQELETNCSEFPSPDLLIRTSGELRISNFLLWQLAYT 60
           CKS+A +VKDG I  +DI E++IEQELETNC+EFP PDLLIRTSGELR+SNFLLWQLAYT
Sbjct: 227 CKSVAKKVKDGHIHLDDINENIIEQELETNCTEFPYPDLLIRTSGELRVSNFLLWQLAYT 286

Query: 61  ELFFAEELWPDFGKEGFVEALTS 83
           EL+F  ELWPDFGK+ FV+AL+S
Sbjct: 287 ELYFNRELWPDFGKDEFVDALSS 309


>Glyma02g39110.1 
          Length = 250

 Score =  134 bits (338), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 60/83 (72%), Positives = 74/83 (89%)

Query: 1   CKSIAARVKDGLIEPEDITESLIEQELETNCSEFPSPDLLIRTSGELRISNFLLWQLAYT 60
           CKS+A +VKD  +  +DI E++IEQELETNC+EFP PDLLIRTSGELR+SNFLLWQLAYT
Sbjct: 158 CKSVAKKVKDDHLHLDDINENIIEQELETNCTEFPYPDLLIRTSGELRVSNFLLWQLAYT 217

Query: 61  ELFFAEELWPDFGKEGFVEALTS 83
           EL+F ++LWPDFGK+ FV+AL+S
Sbjct: 218 ELYFNQKLWPDFGKDEFVDALSS 240


>Glyma14g37210.1 
          Length = 307

 Score =  125 bits (313), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 56/83 (67%), Positives = 68/83 (81%)

Query: 1   CKSIAARVKDGLIEPEDITESLIEQELETNCSEFPSPDLLIRTSGELRISNFLLWQLAYT 60
           CKS+A +VKDGL+  ++I E +IE+ELET C+EFP PDLLIR  GELR+SNFLLWQLAYT
Sbjct: 211 CKSVAKKVKDGLLHLDNINEKIIEKELETKCTEFPYPDLLIRAGGELRLSNFLLWQLAYT 270

Query: 61  ELFFAEELWPDFGKEGFVEALTS 83
           E +F +  WPDFGKE FV+AL S
Sbjct: 271 EFYFNKTPWPDFGKEEFVDALRS 293


>Glyma02g39120.1 
          Length = 85

 Score = 69.3 bits (168), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 34/54 (62%), Positives = 41/54 (75%), Gaps = 2/54 (3%)

Query: 1  CKSIAARVKDGLIEPEDITESLIEQELETNCSEFPSPDLLIRTSGELRISNFLL 54
          CKS+A +VKD  +   D  E +IEQELET C++F  PDLLIRTSGEL +SNFLL
Sbjct: 33 CKSLAKKVKDDHLHLND--EKIIEQELETKCTDFSYPDLLIRTSGELSLSNFLL 84


>Glyma09g33130.1 
          Length = 362

 Score = 57.4 bits (137), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 25/47 (53%), Positives = 31/47 (65%)

Query: 35  PSPDLLIRTSGELRISNFLLWQLAYTELFFAEELWPDFGKEGFVEAL 81
           P PD+LIRTSGE R+SNFLLWQ +   L+    LWP+ G    V A+
Sbjct: 299 PDPDILIRTSGEARLSNFLLWQTSTCPLYAPTALWPEIGLRHLVWAV 345


>Glyma16g22500.1 
          Length = 304

 Score = 57.0 bits (136), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 25/47 (53%), Positives = 31/47 (65%)

Query: 35  PSPDLLIRTSGELRISNFLLWQLAYTELFFAEELWPDFGKEGFVEAL 81
           P PD+LIRTSGE R+SNFLLWQ +   L+    LWP+ G    V A+
Sbjct: 241 PDPDILIRTSGEARLSNFLLWQTSTCPLYAPTALWPEIGLRHLVWAV 287