Jatropha Genome Database

JcCA0277831.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0277831.10 - phase: 0 /partial
         (303 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g07310.1                                                       461   e-130
Glyma17g07310.2                                                       457   e-129
Glyma13g01180.1                                                       392   e-109

>Glyma17g07310.1 
          Length = 595

 Score =  461 bits (1186), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 239/288 (82%), Positives = 268/288 (93%)

Query: 10  PRRTVFLGVDVGTGSARAGLFNENGKLLGTASSPIQIWKERDCVEQSSTDIWHAICAAVK 69
           P R+VFLGVDVGTGSARAGLF+E GKLLG++SS IQIWK+  CVEQSSTDIW A+CAAVK
Sbjct: 28  PSRSVFLGVDVGTGSARAGLFDEEGKLLGSSSSSIQIWKDGACVEQSSTDIWLAVCAAVK 87

Query: 70  SACNLADVSGEEVTGIGFAATCSLVAVDSDGAPVSVSWSGDSRRNIIVWMDHRAVKQAEK 129
           +AC+ A+V+  EV G+GFAATCSLVAVDSD +PVSVSWSGDSRRN+IVWMDHRAV+QAE+
Sbjct: 88  AACSKAEVAPTEVKGMGFAATCSLVAVDSDSSPVSVSWSGDSRRNVIVWMDHRAVEQAER 147

Query: 130 INSSNSPVLQYCGGALSPEMQPPKLLWVKENLQESWSMVFRWMDLSDWLSYRATGDDTRS 189
           INSS SPVL+YCGGA+SPEM+PPKLLWVKENLQESWSMVFRWMDLSDWLSYRATGDDTRS
Sbjct: 148 INSSKSPVLEYCGGAVSPEMEPPKLLWVKENLQESWSMVFRWMDLSDWLSYRATGDDTRS 207

Query: 190 LCTTVCKWTYLGHAHMHQINEKDSRDMEACGWDDDFWEEIGLGDLVDGHHAKIGRSVAFP 249
           LCTTVCKWTYLGHAHM  +N+K+SRDMEACGWDDDFWEEIGLGDL++GHHAKIGRSVAFP
Sbjct: 208 LCTTVCKWTYLGHAHMQHVNDKESRDMEACGWDDDFWEEIGLGDLIEGHHAKIGRSVAFP 267

Query: 250 GHALGSGLTPTAAKELGLVAGTPVGTSLIDAHAGGVGIMESALEADSD 297
           GH LGSGLTPTAAKELGLV G PVGTSLIDAHAGGVG++ES   ++++
Sbjct: 268 GHPLGSGLTPTAAKELGLVPGIPVGTSLIDAHAGGVGVIESVPPSEAE 315


>Glyma17g07310.2 
          Length = 515

 Score =  457 bits (1177), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 239/288 (82%), Positives = 268/288 (93%)

Query: 10  PRRTVFLGVDVGTGSARAGLFNENGKLLGTASSPIQIWKERDCVEQSSTDIWHAICAAVK 69
           P R+VFLGVDVGTGSARAGLF+E GKLLG++SS IQIWK+  CVEQSSTDIW A+CAAVK
Sbjct: 28  PSRSVFLGVDVGTGSARAGLFDEEGKLLGSSSSSIQIWKDGACVEQSSTDIWLAVCAAVK 87

Query: 70  SACNLADVSGEEVTGIGFAATCSLVAVDSDGAPVSVSWSGDSRRNIIVWMDHRAVKQAEK 129
           +AC+ A+V+  EV G+GFAATCSLVAVDSD +PVSVSWSGDSRRN+IVWMDHRAV+QAE+
Sbjct: 88  AACSKAEVAPTEVKGMGFAATCSLVAVDSDSSPVSVSWSGDSRRNVIVWMDHRAVEQAER 147

Query: 130 INSSNSPVLQYCGGALSPEMQPPKLLWVKENLQESWSMVFRWMDLSDWLSYRATGDDTRS 189
           INSS SPVL+YCGGA+SPEM+PPKLLWVKENLQESWSMVFRWMDLSDWLSYRATGDDTRS
Sbjct: 148 INSSKSPVLEYCGGAVSPEMEPPKLLWVKENLQESWSMVFRWMDLSDWLSYRATGDDTRS 207

Query: 190 LCTTVCKWTYLGHAHMHQINEKDSRDMEACGWDDDFWEEIGLGDLVDGHHAKIGRSVAFP 249
           LCTTVCKWTYLGHAHM  +N+K+SRDMEACGWDDDFWEEIGLGDL++GHHAKIGRSVAFP
Sbjct: 208 LCTTVCKWTYLGHAHMQHVNDKESRDMEACGWDDDFWEEIGLGDLIEGHHAKIGRSVAFP 267

Query: 250 GHALGSGLTPTAAKELGLVAGTPVGTSLIDAHAGGVGIMESALEADSD 297
           GH LGSGLTPTAAKELGLV G PVGTSLIDAHAGGVG++ES   ++++
Sbjct: 268 GHPLGSGLTPTAAKELGLVPGIPVGTSLIDAHAGGVGVIESVPPSEAE 315


>Glyma13g01180.1 
          Length = 551

 Score =  392 bits (1008), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 218/330 (66%), Positives = 250/330 (75%), Gaps = 47/330 (14%)

Query: 14  VFLGVDVGTGSARAGLFNENGKLLGTASSPIQIWKERDCVEQSSTDIWHAICAAVKSACN 73
           VFLGVDVGTGSARAGLF+E GKLLG++SSPIQIWK+  CVEQSSTDIW A+CAAVK+AC+
Sbjct: 15  VFLGVDVGTGSARAGLFDEEGKLLGSSSSPIQIWKDGACVEQSSTDIWLAVCAAVKAACS 74

Query: 74  LADVSGEEVTGIGFAATCSLVAVDSDGAPVSVSWSGDSRRNIIVWMDHRAVKQAEKINSS 133
            A V+  EV G+GFAATCSLVAVDSD +PVSVSWSGDSRRN+IVWMDHRA++QAE+INSS
Sbjct: 75  KAKVASTEVKGMGFAATCSLVAVDSDSSPVSVSWSGDSRRNVIVWMDHRAIEQAERINSS 134

Query: 134 NSPVLQYCGGALSPEMQPPKLLWVKENLQESWSMVFRWMDLSDWLSYRATGDDTRSLCTT 193
            SP+L+YCG A+SPEM+PPKLLWVKENLQESWSMVFRWMDLSDWLSYRATGDDTRSLCTT
Sbjct: 135 KSPILEYCGAAVSPEMEPPKLLWVKENLQESWSMVFRWMDLSDWLSYRATGDDTRSLCTT 194

Query: 194 VCKWTYLGHAHMHQINEKDSRDMEACGWDDDFWEEIGLGDLVDGHHAKIGRSVA------ 247
           VCKWTYLGHAHM  +N+K+SRD+EACGWDDDFWEEIGLGDL++GHHAKI           
Sbjct: 195 VCKWTYLGHAHMQHVNDKESRDLEACGWDDDFWEEIGLGDLIEGHHAKIVEYFVQLQTLS 254

Query: 248 -----------------------------FPGHALGSGLTPTAAK------------ELG 266
                                        FP  + G       +K            ELG
Sbjct: 255 VHLSFNIELNFFLPLEVQYGETMLWTKCCFPWPSFGFWSYSYCSKGKNFCIILKFELELG 314

Query: 267 LVAGTPVGTSLIDAHAGGVGIMESALEADS 296
           LV G PVGTSLIDAHAGGVG++ES  ++++
Sbjct: 315 LVPGIPVGTSLIDAHAGGVGVIESVPQSEA 344