Jatropha Genome Database

JcCA0277701.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0277701.10 - phase: 0 /pseudo/partial
         (465 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma10g03030.2                                                       238   7e-63
Glyma10g03030.1                                                       238   7e-63
Glyma02g16780.1                                                       226   5e-59

>Glyma10g03030.2 
          Length = 546

 Score =  238 bits (608), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 136/302 (45%), Positives = 173/302 (57%), Gaps = 15/302 (4%)

Query: 161 RIDFLEDIVEAAKNNKKTLFLAMESSMNMMRQVXXXXXXXXXXXXXXXSAGLDILKKVEE 220
           RID LE+I++ AK NKKTLF +MES +N+MR+V               + G +IL ++EE
Sbjct: 249 RIDLLEEIIDEAKTNKKTLFSSMESLINLMREVEVQEKAAEQANMEAATGGSNILARIEE 308

Query: 221 LEQMLRHAKEANDMHAGEIYGEKAILATEVRELQGRLLSLSDERDKALAILDEMNQXXXX 280
            + ML  AKEANDMHAGE+YGEKAILATE++ELQ RLL LSDERDK+LAILDEM      
Sbjct: 309 YKTMLVQAKEANDMHAGEVYGEKAILATELKELQSRLLGLSDERDKSLAILDEMRHILEE 368

Query: 281 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIMDKVVQESKILQRQAEENSKLREFLVD 340
                                           +++ VV ES+ LQ++AEENSKL+EFL+D
Sbjct: 369 RLAAAEESRKAAEQQKLEKEESARKALVEQERLVEMVVHESQRLQQEAEENSKLQEFLID 428

Query: 341 RGHVVDTLQGEISVICQDVRLLKERFDENVPLSKSISSTQTXXXXXXXXXXXXXXXXXXX 400
           RG VVD LQGEISVICQD++LLKE+FD N+PLSKS +S+QT                   
Sbjct: 429 RGRVVDMLQGEISVICQDIKLLKEKFDANLPLSKSFTSSQTSCKLASSGSSHKTLASDAG 488

Query: 401 XXXXXXXXXXXXXXEPRDTSKSPKERSPTSSIHDQSPKSQHEEDK-RTDRKELLDEGWDF 459
                              S   ++ S T+SI   S K  H+E+K + D   LLD+GWD 
Sbjct: 489 SD--------------HSESSGIRKTSWTTSIESLSSKIGHDEEKSKADHNALLDDGWDI 534

Query: 460 FE 461
           FE
Sbjct: 535 FE 536


>Glyma10g03030.1 
          Length = 546

 Score =  238 bits (608), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 136/302 (45%), Positives = 173/302 (57%), Gaps = 15/302 (4%)

Query: 161 RIDFLEDIVEAAKNNKKTLFLAMESSMNMMRQVXXXXXXXXXXXXXXXSAGLDILKKVEE 220
           RID LE+I++ AK NKKTLF +MES +N+MR+V               + G +IL ++EE
Sbjct: 249 RIDLLEEIIDEAKTNKKTLFSSMESLINLMREVEVQEKAAEQANMEAATGGSNILARIEE 308

Query: 221 LEQMLRHAKEANDMHAGEIYGEKAILATEVRELQGRLLSLSDERDKALAILDEMNQXXXX 280
            + ML  AKEANDMHAGE+YGEKAILATE++ELQ RLL LSDERDK+LAILDEM      
Sbjct: 309 YKTMLVQAKEANDMHAGEVYGEKAILATELKELQSRLLGLSDERDKSLAILDEMRHILEE 368

Query: 281 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIMDKVVQESKILQRQAEENSKLREFLVD 340
                                           +++ VV ES+ LQ++AEENSKL+EFL+D
Sbjct: 369 RLAAAEESRKAAEQQKLEKEESARKALVEQERLVEMVVHESQRLQQEAEENSKLQEFLID 428

Query: 341 RGHVVDTLQGEISVICQDVRLLKERFDENVPLSKSISSTQTXXXXXXXXXXXXXXXXXXX 400
           RG VVD LQGEISVICQD++LLKE+FD N+PLSKS +S+QT                   
Sbjct: 429 RGRVVDMLQGEISVICQDIKLLKEKFDANLPLSKSFTSSQTSCKLASSGSSHKTLASDAG 488

Query: 401 XXXXXXXXXXXXXXEPRDTSKSPKERSPTSSIHDQSPKSQHEEDK-RTDRKELLDEGWDF 459
                              S   ++ S T+SI   S K  H+E+K + D   LLD+GWD 
Sbjct: 489 SD--------------HSESSGIRKTSWTTSIESLSSKIGHDEEKSKADHNALLDDGWDI 534

Query: 460 FE 461
           FE
Sbjct: 535 FE 536


>Glyma02g16780.1 
          Length = 379

 Score =  226 bits (576), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 129/299 (43%), Positives = 171/299 (57%), Gaps = 16/299 (5%)

Query: 161 RIDFLEDIVEAAKNNKKTLFLAMESSMNMMRQVXXXXXXXXXXXXXXXSAGLDILKKVEE 220
           RID LE+I++ AK NKK LF +MES +N+MR+V               + G +IL ++EE
Sbjct: 90  RIDLLEEIIDEAKTNKKMLFSSMESLINLMREVELQEKAAEQANMEAATGGSNILARIEE 149

Query: 221 LEQMLRHAKEANDMHAGEIYGEKAILATEVRELQGRLLSLSDERDKALAILDEMNQXXXX 280
            + M+  A EANDMH+GE+YGEKAIL TE++ELQ RLL LSDERD++LAILDE+      
Sbjct: 150 YKTMVVQANEANDMHSGEVYGEKAILTTELKELQSRLLGLSDERDRSLAILDEIRHILEV 209

Query: 281 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIMDKVVQESKILQRQAEENSKLREFLVD 340
                                           +++KVV ES+ LQ++AEENSKL+EFL+D
Sbjct: 210 RLAAAEELRKAAEQLKLEKEESARKALVEQERLVEKVVHESQRLQQEAEENSKLQEFLID 269

Query: 341 RGHVVDTLQGEISVICQDVRLLKERFDENVPLSKSISSTQTXXXXXXXXXXXXXXXXXXX 400
           RG VVD LQGEISVICQD++LLKE+FD N+PLSKS +S+QT                   
Sbjct: 270 RGRVVDMLQGEISVICQDIKLLKEKFDANLPLSKSFTSSQT-------SCKLASSGSSHK 322

Query: 401 XXXXXXXXXXXXXXEPRDTSKSPKERSPTSSIHDQSPKSQHEEDKRT--DRKELLDEGW 457
                         E R TS+       T+SI   S KS H+E++++  D   LLD+GW
Sbjct: 323 TLASDAGSEHSESSEIRKTSR-------TASIESLSSKSGHDEEEKSKADHNALLDDGW 374