Jatropha Genome Database

JcCA0277661.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0277661.10 - phase: 0 
         (250 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g22480.1                                                       302   2e-82
Glyma07g03610.1                                                       302   3e-82
Glyma12g30010.1                                                       124   9e-29

>Glyma08g22480.1 
          Length = 245

 Score =  302 bits (774), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 148/177 (83%), Positives = 152/177 (85%)

Query: 74  FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPAEYEKLGSYALIGLPASYETRFIEPGETKT 133
           FHGLCYVVGDNIDTDQIIPAEYLTLVPS P EYEKLGSYALIGLPA+Y TRFIEPGE KT
Sbjct: 68  FHGLCYVVGDNIDTDQIIPAEYLTLVPSKPDEYEKLGSYALIGLPATYATRFIEPGEIKT 127

Query: 134 KYSIVIGGDNFGCGSSREHXXXXXXXXXXXXXXXESYARIFFRNSVATGEIYPLESEVRI 193
           KY+IVIGG NFGCGSSREH               ESYARIFFRNSVATGE+YPLESE R+
Sbjct: 128 KYAIVIGGANFGCGSSREHAPVALGASGAAAVVAESYARIFFRNSVATGEVYPLESEGRL 187

Query: 194 CEECKTGDVVTIELAEGRLINHTTGKEYILKPIGDAGPVIEAGGIFAYARKTGMIPS 250
           CEEC TGDVVTIEL E RLINHTTGKEY LKPIGDAGPVIEAGGIFAYARKTGMIPS
Sbjct: 188 CEECTTGDVVTIELGESRLINHTTGKEYRLKPIGDAGPVIEAGGIFAYARKTGMIPS 244


>Glyma07g03610.1 
          Length = 246

 Score =  302 bits (773), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 146/177 (82%), Positives = 152/177 (85%)

Query: 74  FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPAEYEKLGSYALIGLPASYETRFIEPGETKT 133
           FHGLCYVVGDNIDTDQIIPAEYLTLVPS P EYEKLGSYAL+GLPA+Y  RF++PGETKT
Sbjct: 69  FHGLCYVVGDNIDTDQIIPAEYLTLVPSKPDEYEKLGSYALVGLPATYAARFVDPGETKT 128

Query: 134 KYSIVIGGDNFGCGSSREHXXXXXXXXXXXXXXXESYARIFFRNSVATGEIYPLESEVRI 193
           KYSIVIGG NFGCGSSREH               ESYARIFFRNSVATGE+YPLESE R+
Sbjct: 129 KYSIVIGGANFGCGSSREHAPVALGASGAAAVVAESYARIFFRNSVATGEVYPLESEGRL 188

Query: 194 CEECKTGDVVTIELAEGRLINHTTGKEYILKPIGDAGPVIEAGGIFAYARKTGMIPS 250
           CEEC TGDVVTIEL E RLINHTTGKEY LKPIGDAGPVIEAGGIFAYARKTGMIPS
Sbjct: 189 CEECTTGDVVTIELGESRLINHTTGKEYRLKPIGDAGPVIEAGGIFAYARKTGMIPS 245


>Glyma12g30010.1 
          Length = 162

 Score =  124 bits (311), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 56/79 (70%), Positives = 63/79 (79%)

Query: 74  FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPAEYEKLGSYALIGLPASYETRFIEPGETKT 133
           F+ LCYVV DNIDT+QIIPAEYLTLVPS P EYEK GSY L G+PA+Y  RF++ GE  T
Sbjct: 67  FYNLCYVVNDNIDTNQIIPAEYLTLVPSKPDEYEKFGSYTLTGIPATYPMRFVDLGEANT 126

Query: 134 KYSIVIGGDNFGCGSSREH 152
           KY+IVIG  NFG GSS EH
Sbjct: 127 KYAIVIGSSNFGRGSSHEH 145