Jatropha Genome Database

JcCA0274511.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0274511.10 + phase: 0 /partial
         (121 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma19g42620.1                                                       172   1e-43
Glyma19g42610.1                                                       171   2e-43
Glyma03g40050.1                                                       155   8e-39
Glyma19g42600.1                                                       155   1e-38

>Glyma19g42620.1 
          Length = 478

 Score =  172 bits (435), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 79/105 (75%), Positives = 95/105 (90%)

Query: 17  GNNIYGDDVKENLLRLQREGSEEDAAYILMQRIFPAVSPALLVRNGICHKDHAISELGIY 76
           GNNIYGDDV+E LL+LQ+  S+EDAAYILMQRIFP++S  +L+RNG  HKDHAISELGI+
Sbjct: 374 GNNIYGDDVRETLLKLQKADSQEDAAYILMQRIFPSISATVLLRNGCWHKDHAISELGIF 433

Query: 77  SAYLRNKDKVIINDKSGYLVRTKVASSNEGGVAAGFAVLDSVYLN 121
             YLRNK+KVI+N++SGYL+RTKV+SS+EGGVAAGFAVLDSVYL 
Sbjct: 434 GTYLRNKNKVIMNEQSGYLMRTKVSSSDEGGVAAGFAVLDSVYLT 478


>Glyma19g42610.1 
          Length = 527

 Score =  171 bits (433), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 80/105 (76%), Positives = 95/105 (90%)

Query: 17  GNNIYGDDVKENLLRLQREGSEEDAAYILMQRIFPAVSPALLVRNGICHKDHAISELGIY 76
           GNNIYGDDV++ LL+LQ+EGS EDAAYILMQRIFP+ S A+L+RNG  HKD AISELG++
Sbjct: 423 GNNIYGDDVRKALLKLQKEGSLEDAAYILMQRIFPSNSAAILMRNGCWHKDRAISELGVF 482

Query: 77  SAYLRNKDKVIINDKSGYLVRTKVASSNEGGVAAGFAVLDSVYLN 121
           S YLRNKDKVI+N +SGYL+RTK++SS+EGGVAAGFAVLDSVYL 
Sbjct: 483 STYLRNKDKVIMNKQSGYLMRTKISSSDEGGVAAGFAVLDSVYLT 527


>Glyma03g40050.1 
          Length = 547

 Score =  155 bits (393), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 72/104 (69%), Positives = 87/104 (83%)

Query: 17  GNNIYGDDVKENLLRLQREGSEEDAAYILMQRIFPAVSPALLVRNGICHKDHAISELGIY 76
           GNNIYGD+++E LL+LQ  GSEEDAAYILMQRIFPA SPA+LVR+G     H ISE G++
Sbjct: 443 GNNIYGDELRETLLKLQEAGSEEDAAYILMQRIFPATSPAILVRDGNWDMGHVISEAGVF 502

Query: 77  SAYLRNKDKVIINDKSGYLVRTKVASSNEGGVAAGFAVLDSVYL 120
             YLRNKDKVIIN++SGY+VRTK++SS EGGV  GF V+D+VYL
Sbjct: 503 GTYLRNKDKVIINNESGYMVRTKISSSYEGGVLPGFGVVDTVYL 546


>Glyma19g42600.1 
          Length = 547

 Score =  155 bits (391), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 71/104 (68%), Positives = 87/104 (83%)

Query: 17  GNNIYGDDVKENLLRLQREGSEEDAAYILMQRIFPAVSPALLVRNGICHKDHAISELGIY 76
           GNNIYGD+++E LL+LQ  GS+EDAAYILMQRIFPA SPA+LVR+G     H ISE GI+
Sbjct: 443 GNNIYGDELRETLLKLQEAGSQEDAAYILMQRIFPATSPAILVRDGNWDTGHVISEAGIF 502

Query: 77  SAYLRNKDKVIINDKSGYLVRTKVASSNEGGVAAGFAVLDSVYL 120
             YLRNKDK+IIN++SGY+VRTK++SS EGGV  GF V+D+VYL
Sbjct: 503 GTYLRNKDKIIINNESGYMVRTKISSSYEGGVLPGFGVVDTVYL 546