Jatropha Genome Database

JcCA0273951.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0273951.10 - phase: 1 /partial
         (270 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma11g35440.1                                                       303   9e-83
Glyma18g03000.1                                                       300   1e-81

>Glyma11g35440.1 
          Length = 253

 Score =  303 bits (777), Expect = 9e-83,   Method: Compositional matrix adjust.
 Identities = 150/235 (63%), Positives = 176/235 (74%)

Query: 36  KKRTACKFSPSEKVTFAHEEHEKNWPLVKMCXXXXXXXXXXXXXXXXXXXXMIIWPNSKR 95
           K + +CK +       + +E  K  PLVKMC                    M++WPNSKR
Sbjct: 19  KHKISCKLTDVGNDLSSSKELGKCQPLVKMCGITSAKDAAMAAEAGASFIGMVMWPNSKR 78

Query: 96  SISLSVAKEISKVARSYGAKPVGVFVDDDTDTILRAADACDLEFVQLHGTGSRAAFPDLV 155
           S+SLSVA EISKVAR YGA+PVGVFVDDD++TILRA+DA +LEFVQLHG GSR AFP L+
Sbjct: 79  SVSLSVALEISKVARDYGAEPVGVFVDDDSETILRASDAANLEFVQLHGYGSRLAFPSLI 138

Query: 156 KEKQVIYVLHANADGNLINQISDEDCSMVDWVLVDSATGGSGKGFNWAQFKLPPIRSKHG 215
           +E +VIYVLH N DGNL+N ISDE+CS+VDWVLVDSA GGSGK FNW Q KLP I+SK+G
Sbjct: 139 QENRVIYVLHVNEDGNLLNTISDEECSLVDWVLVDSAKGGSGKAFNWDQLKLPNIKSKYG 198

Query: 216 WLLAGGIHSENVCEALSILKPHGVDVSSGICDSDGIKKDQSQISSLMYAVRSVRY 270
           WLLAGGI  ENV +ALS LKP GVDVSSGIC SDGI+KDQS+I+S M AV SV+Y
Sbjct: 199 WLLAGGIQPENVSKALSTLKPEGVDVSSGICASDGIRKDQSRITSFMNAVHSVQY 253


>Glyma18g03000.1 
          Length = 253

 Score =  300 bits (768), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 148/235 (62%), Positives = 175/235 (74%)

Query: 36  KKRTACKFSPSEKVTFAHEEHEKNWPLVKMCXXXXXXXXXXXXXXXXXXXXMIIWPNSKR 95
           K + +CK +     + + +E  K  P VKMC                    MI+WPNSKR
Sbjct: 19  KHKVSCKLTEVGNDSSSSKELGKCQPFVKMCGIASAKDAAMAAEAGANFIGMIMWPNSKR 78

Query: 96  SISLSVAKEISKVARSYGAKPVGVFVDDDTDTILRAADACDLEFVQLHGTGSRAAFPDLV 155
           S+SLSVA EISKVAR YGA+PVGVFVDDD++TILRA+DA +LEFVQLHG GSR AFP L+
Sbjct: 79  SVSLSVAMEISKVARDYGAEPVGVFVDDDSETILRASDAANLEFVQLHGHGSRLAFPSLI 138

Query: 156 KEKQVIYVLHANADGNLINQISDEDCSMVDWVLVDSATGGSGKGFNWAQFKLPPIRSKHG 215
           +E +VIYVLH N DG+L+N ISDE+CS+VDWVLVDSA GG GK FNW Q KLP I+SK+G
Sbjct: 139 QENRVIYVLHVNEDGSLLNTISDEECSLVDWVLVDSAKGGRGKAFNWDQLKLPNIKSKYG 198

Query: 216 WLLAGGIHSENVCEALSILKPHGVDVSSGICDSDGIKKDQSQISSLMYAVRSVRY 270
           WLLAGGIH ENV EALS L+P GVDVSSGIC SDGI+KDQS+I+S M AV S +Y
Sbjct: 199 WLLAGGIHPENVSEALSTLRPEGVDVSSGICASDGIRKDQSRIASFMNAVHSFQY 253