Jatropha Genome Database

JcCA0273631.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0273631.10 - phase: 0 
         (272 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g43790.1                                                       187   2e-47
Glyma12g14110.1                                                       184   8e-47
Glyma06g43790.2                                                       157   1e-38
Glyma07g35090.1                                                       150   2e-36
Glyma20g02950.2                                                       146   2e-35
Glyma20g02950.1                                                       146   2e-35
Glyma12g19470.1                                                        77   2e-14
Glyma08g36100.1                                                        60   3e-09

>Glyma06g43790.1 
          Length = 189

 Score =  187 bits (474), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 91/135 (67%), Positives = 100/135 (74%), Gaps = 7/135 (5%)

Query: 13  NLFTFFIAFYF-------LVPSAHSKAPLIGVHPLDEKYFSSRLIKCKDGSKSFPRDSLN 65
           +L  FF+ F+F             S   L+G+HPLDEKY+SS +IKCKD SKSF RD LN
Sbjct: 2   DLHCFFLRFHFACFLLFATAACCFSHPSLLGIHPLDEKYYSSEMIKCKDESKSFSRDRLN 61

Query: 66  DNFCDCVDGTDEPGTSACPRGKFYCQNLGSKPQFIFSSHVNDRICDCCDGSDEYDSGINC 125
           DNFCDC DGTDEPGTSACP GKFYC+NLGSKPQFI SSHVND  CDCCDGSDEYD  I C
Sbjct: 62  DNFCDCPDGTDEPGTSACPNGKFYCRNLGSKPQFIVSSHVNDHFCDCCDGSDEYDGTICC 121

Query: 126 PNTCIMGGNLEYKAR 140
           PNTC+MGGN E   R
Sbjct: 122 PNTCVMGGNAESTFR 136


>Glyma12g14110.1 
          Length = 188

 Score =  184 bits (467), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 89/126 (70%), Positives = 98/126 (77%), Gaps = 3/126 (2%)

Query: 14  LFTFFIAFYFL---VPSAHSKAPLIGVHPLDEKYFSSRLIKCKDGSKSFPRDSLNDNFCD 70
           L  F  A + L   V    S   L+G+HPLDEKY++S +IKC+DGSKSF RD LNDNFCD
Sbjct: 6   LLRFRFACFVLFASVACCFSHPSLLGIHPLDEKYYNSEVIKCRDGSKSFSRDRLNDNFCD 65

Query: 71  CVDGTDEPGTSACPRGKFYCQNLGSKPQFIFSSHVNDRICDCCDGSDEYDSGINCPNTCI 130
           C DGTDEPGTSACP GKFYC+NLGSKPQFI SSHVND  CDCCDGSDEYD  I CPNTC+
Sbjct: 66  CPDGTDEPGTSACPNGKFYCRNLGSKPQFIVSSHVNDHFCDCCDGSDEYDGIICCPNTCV 125

Query: 131 MGGNLE 136
           MGGN E
Sbjct: 126 MGGNAE 131


>Glyma06g43790.2 
          Length = 145

 Score =  157 bits (398), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 74/92 (80%), Positives = 77/92 (83%)

Query: 49  LIKCKDGSKSFPRDSLNDNFCDCVDGTDEPGTSACPRGKFYCQNLGSKPQFIFSSHVNDR 108
           +IKCKD SKSF RD LNDNFCDC DGTDEPGTSACP GKFYC+NLGSKPQFI SSHVND 
Sbjct: 1   MIKCKDESKSFSRDRLNDNFCDCPDGTDEPGTSACPNGKFYCRNLGSKPQFIVSSHVNDH 60

Query: 109 ICDCCDGSDEYDSGINCPNTCIMGGNLEYKAR 140
            CDCCDGSDEYD  I CPNTC+MGGN E   R
Sbjct: 61  FCDCCDGSDEYDGTICCPNTCVMGGNAESTFR 92


>Glyma07g35090.1 
          Length = 629

 Score =  150 bits (378), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 66/110 (60%), Positives = 82/110 (74%), Gaps = 1/110 (0%)

Query: 27  SAHSKAPLIGVHPLDEKYF-SSRLIKCKDGSKSFPRDSLNDNFCDCVDGTDEPGTSACPR 85
           S+  K P +G+ P D+KY+ +S +I+CKDGS  F +  LND+FCDC DGTDEPGTSACP 
Sbjct: 18  SSKPKDPFLGISPEDDKYYKASDVIRCKDGSGKFTKAQLNDDFCDCADGTDEPGTSACPG 77

Query: 86  GKFYCQNLGSKPQFIFSSHVNDRICDCCDGSDEYDSGINCPNTCIMGGNL 135
           GKFYC+N G  P ++FSS VND ICDCCDG+DEYD  + CPNTC   G +
Sbjct: 78  GKFYCRNAGHSPVYLFSSRVNDGICDCCDGTDEYDGQVKCPNTCWEAGKV 127


>Glyma20g02950.2 
          Length = 568

 Score =  146 bits (369), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 74/157 (47%), Positives = 93/157 (59%), Gaps = 4/157 (2%)

Query: 27  SAHSKAPLIGVHPLDEKYF-SSRLIKCKDGSKSFPRDSLNDNFCDCVDGTDEPGTSACPR 85
           S+  K P +GV P D+ Y+ SS +I CKDGS  F +   ND+FCDC DGTDEPGTSACP 
Sbjct: 24  SSKPKDPFLGVAPEDDDYYKSSDVISCKDGSGKFTKAQFNDDFCDCADGTDEPGTSACPG 83

Query: 86  GKFYCQNLGSKPQFIFSSHVNDRICDCCDGSDEYDSGINCPNTCIMGGNLEYKARRFISA 145
           GKFYC+N G  P ++FSS VND ICDCCDG+DEYD  + CPNTC   G +   AR  +  
Sbjct: 84  GKFYCRNAGHSPVYLFSSRVNDGICDCCDGTDEYDGQVKCPNTCWEAGKV---ARDRLKK 140

Query: 146 TDAKESXXXXXXXXXXHKAKVTGSINRVMLTDSRVED 182
             A              +AKV    +   L+  + E+
Sbjct: 141 KIATYQEGVKLRKQEIEQAKVAMEKDEAELSKLKKEE 177


>Glyma20g02950.1 
          Length = 568

 Score =  146 bits (369), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 74/157 (47%), Positives = 93/157 (59%), Gaps = 4/157 (2%)

Query: 27  SAHSKAPLIGVHPLDEKYF-SSRLIKCKDGSKSFPRDSLNDNFCDCVDGTDEPGTSACPR 85
           S+  K P +GV P D+ Y+ SS +I CKDGS  F +   ND+FCDC DGTDEPGTSACP 
Sbjct: 24  SSKPKDPFLGVAPEDDDYYKSSDVISCKDGSGKFTKAQFNDDFCDCADGTDEPGTSACPG 83

Query: 86  GKFYCQNLGSKPQFIFSSHVNDRICDCCDGSDEYDSGINCPNTCIMGGNLEYKARRFISA 145
           GKFYC+N G  P ++FSS VND ICDCCDG+DEYD  + CPNTC   G +   AR  +  
Sbjct: 84  GKFYCRNAGHSPVYLFSSRVNDGICDCCDGTDEYDGQVKCPNTCWEAGKV---ARDRLKK 140

Query: 146 TDAKESXXXXXXXXXXHKAKVTGSINRVMLTDSRVED 182
             A              +AKV    +   L+  + E+
Sbjct: 141 KIATYQEGVKLRKQEIEQAKVAMEKDEAELSKLKKEE 177


>Glyma12g19470.1 
          Length = 57

 Score = 77.0 bits (188), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 35/54 (64%), Positives = 41/54 (75%)

Query: 41 DEKYFSSRLIKCKDGSKSFPRDSLNDNFCDCVDGTDEPGTSACPRGKFYCQNLG 94
          D  Y SS +I+CKDGS  F +  LND+FC+C DG DE GTSACP GKFYCQN+G
Sbjct: 2  DNYYKSSNVIRCKDGSGKFTKAQLNDDFCECADGIDELGTSACPGGKFYCQNVG 55


>Glyma08g36100.1 
          Length = 102

 Score = 60.1 bits (144), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 29/50 (58%), Positives = 33/50 (66%), Gaps = 7/50 (14%)

Query: 52 CKDGSKSFPRDSLNDNFCDCVDGTDEPG-------TSACPRGKFYCQNLG 94
          CKDGS  F +  LND+ CDCVDGT+EPG       T ACP  KFYC+N G
Sbjct: 1  CKDGSGKFTKAQLNDDMCDCVDGTNEPGFYFNYEITMACPGEKFYCRNAG 50