Jatropha Genome Database
- JcCA0271351.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0271351.10 + phase: 0 /partial
(180 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma02g17130.1 256 9e-69
Glyma10g02660.1 234 5e-62
Glyma09g00510.1 104 6e-23
Glyma17g09970.1 99 3e-21
Glyma05g01930.1 99 3e-21
Glyma01g16820.1 88 4e-18
>Glyma02g17130.1
Length = 665
Score = 256 bits (654), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 128/183 (69%), Positives = 150/183 (81%), Gaps = 5/183 (2%)
Query: 1 VPYYADGGQPSYLIIAGLVFTPLSEPLIDAEGEDSMGLKLLAKARYSLSRFKGEQIVILS 60
VPY+ D G PSYLIIAGLVFTPLSEPLI+ E EDS+GLKLLA+ARYSL++FKGEQIVILS
Sbjct: 485 VPYHIDEGLPSYLIIAGLVFTPLSEPLIEEECEDSIGLKLLARARYSLAKFKGEQIVILS 544
Query: 61 QVLSNEVNIGYEDMSNQQVLKYNGTRVKNIHHLAYLVDSCKERYLVFEFDDNYVAVLERQ 120
QVL+NEVNIGYEDM NQQV+K+NG R+KNIHHLA+L+DSC++RYL FEF+D+YVAVLE++
Sbjct: 545 QVLANEVNIGYEDMGNQQVVKFNGARIKNIHHLAHLIDSCEDRYLRFEFEDSYVAVLEKE 604
Query: 121 AANAALSSILRDYGIRCERSPDLLEPYVDS---PGDNQVKERDPLGDGPVSNLEIGFDGL 177
A AA S+L DYGI ERS DL +PYVD+ GD + GD PVSN E G DGL
Sbjct: 605 AVAAASPSVLSDYGIPSERSSDLSKPYVDTLEVEGDQPADQE--FGDSPVSNYEFGPDGL 662
Query: 178 LWA 180
LWA
Sbjct: 663 LWA 665
>Glyma10g02660.1
Length = 606
Score = 234 bits (596), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 121/183 (66%), Positives = 142/183 (77%), Gaps = 17/183 (9%)
Query: 1 VPYYADGGQPSYLIIAGLVFTPLSEPLIDAEGEDSMGLKLLAKARYSLSRFKGEQIVILS 60
VPY+ D GQPSYLIIAGLVFTPLSEPLI+ E EDS+GLKLLA+ARYSL++FKGEQIVILS
Sbjct: 438 VPYHIDEGQPSYLIIAGLVFTPLSEPLIEEECEDSIGLKLLARARYSLAKFKGEQIVILS 497
Query: 61 QVLSNEVNIGYEDMSNQQVLKYNGTRVKNIHHLAYLVDSCKERYLVFEFDDNYVAVLERQ 120
QVL+NE V+K+NGTR+KNIHHLA+L+DSCK+RYL FEF+D+YVAVLE++
Sbjct: 498 QVLANE------------VVKFNGTRIKNIHHLAHLIDSCKDRYLRFEFEDSYVAVLEKE 545
Query: 121 AANAALSSILRDYGIRCERSPDLLEPYVDS---PGDNQVKERDPLGDGPVSNLEIGFDGL 177
+ AA S+L DYGI ERS DLL+PYVD+ GD E GD PVSN E G DGL
Sbjct: 546 SVTAASPSVLSDYGIPSERSSDLLKPYVDALEVEGDQPADEE--FGDSPVSNYEFGPDGL 603
Query: 178 LWA 180
LWA
Sbjct: 604 LWA 606
>Glyma09g00510.1
Length = 528
Score = 104 bits (259), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 60/148 (40%), Positives = 85/148 (57%), Gaps = 3/148 (2%)
Query: 1 VPYYADGGQPSYLIIAGLVFTPLSEPLIDAEGED---SMGLKLLAKARYSLSRFKGEQIV 57
VP + PSY I AGLVF PL++P + GED + +L +A L + +Q+V
Sbjct: 379 VPVHQFDKLPSYYIFAGLVFIPLTQPYLHEYGEDWYNTSPRRLCERALRELPKKANQQLV 438
Query: 58 ILSQVLSNEVNIGYEDMSNQQVLKYNGTRVKNIHHLAYLVDSCKERYLVFEFDDNYVAVL 117
ILSQVL +++N GYE ++ QVLK N T + N+ HL LV+SC +L + +D+ V VL
Sbjct: 439 ILSQVLMDDINAGYERLAELQVLKVNETEIDNLEHLRQLVESCNTEFLRLDLEDDRVIVL 498
Query: 118 ERQAANAALSSILRDYGIRCERSPDLLE 145
A A S IL+ + I S DLL+
Sbjct: 499 NYGTAKIATSRILKRHRIPSSMSVDLLD 526
>Glyma17g09970.1
Length = 576
Score = 98.6 bits (244), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/147 (43%), Positives = 90/147 (61%), Gaps = 4/147 (2%)
Query: 1 VPYYADGGQPSYLIIAGLVFTPLSEPLIDAE-GED---SMGLKLLAKARYSLSRFKGEQI 56
+P ++ G PSY IIAG VFT +S P + +E G+D +KLL K +S+ + EQ+
Sbjct: 428 IPAHSKGKPPSYYIIAGFVFTTVSVPYLRSEYGKDYEYEAPVKLLDKLLHSMPQSPDEQL 487
Query: 57 VILSQVLSNEVNIGYEDMSNQQVLKYNGTRVKNIHHLAYLVDSCKERYLVFEFDDNYVAV 116
V++SQVL ++NIGYED N QVL +NG VKN+ LA +V+SC + YL F+ D + + V
Sbjct: 488 VVVSQVLVADINIGYEDFVNTQVLAFNGQPVKNLKSLATMVESCNDEYLKFDLDYDQIVV 547
Query: 117 LERQAANAALSSILRDYGIRCERSPDL 143
L + A AA IL + I S DL
Sbjct: 548 LRTKTAKAATLDILSTHCIPSAMSDDL 574
>Glyma05g01930.1
Length = 584
Score = 98.6 bits (244), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/147 (43%), Positives = 91/147 (61%), Gaps = 4/147 (2%)
Query: 1 VPYYADGGQPSYLIIAGLVFTPLSEPLIDAE-GED---SMGLKLLAKARYSLSRFKGEQI 56
+P ++ G PSY IIAG VFT +S P + +E G+D +KLL K +S+ + EQ+
Sbjct: 436 IPAHSKGKPPSYYIIAGFVFTTVSVPYLRSEYGKDYEYEAPVKLLDKLLHSMPQSPDEQL 495
Query: 57 VILSQVLSNEVNIGYEDMSNQQVLKYNGTRVKNIHHLAYLVDSCKERYLVFEFDDNYVAV 116
V++SQVL ++NIGYED+ N QVL +NG VKN+ LA +V+SC + YL F+ D + + V
Sbjct: 496 VVVSQVLVADINIGYEDIVNTQVLAFNGQPVKNLKSLATMVESCNDEYLKFDLDYDQIVV 555
Query: 117 LERQAANAALSSILRDYGIRCERSPDL 143
L + A AA IL + I S DL
Sbjct: 556 LRMKTAKAATLDILATHCIPSAMSDDL 582
>Glyma01g16820.1
Length = 544
Score = 88.2 bits (217), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/147 (42%), Positives = 89/147 (60%), Gaps = 4/147 (2%)
Query: 1 VPYYADGGQPSYLIIAGLVFTPLSEPLIDAE-GED---SMGLKLLAKARYSLSRFKGEQI 56
VP + G PSY IIAG VFT +S P + +E G+D +KLL K +S+++ EQ+
Sbjct: 396 VPAHIKGRPPSYYIIAGFVFTAVSVPYLRSEYGKDYEFDAPVKLLEKHLHSMAQSVDEQL 455
Query: 57 VILSQVLSNEVNIGYEDMSNQQVLKYNGTRVKNIHHLAYLVDSCKERYLVFEFDDNYVAV 116
V++SQVL +++NIGYE++ N QVL +N VKN+ LA +V+SC + YL F+ + V
Sbjct: 456 VVVSQVLVSDINIGYEEIVNTQVLAFNDKPVKNLKSLANIVESCDDDYLKFDLEYQQKVV 515
Query: 117 LERQAANAALSSILRDYGIRCERSPDL 143
L+ A AA IL + I S DL
Sbjct: 516 LKTSTAKAATLDILTTHCIPSAMSDDL 542