Jatropha Genome Database

JcCA0270701.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0270701.10 + phase: 2 /pseudo/partial
         (205 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g06400.1                                                       308   2e-84
Glyma11g07250.1                                                       305   3e-83
Glyma11g07250.2                                                       304   4e-83
Glyma01g38200.2                                                       302   2e-82
Glyma01g38200.1                                                       301   2e-82
Glyma05g08550.1                                                        94   1e-19

>Glyma02g06400.1 
          Length = 634

 Score =  308 bits (790), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 146/153 (95%), Positives = 151/153 (98%)

Query: 51  MERYAPTAKDLASRDVVSRSMTMEIREGRGVGPLKDHIYLHLNHLPPDVLKERLPGISET 110
           MERYAPTAKDLASRDVVSRSMTMEIREGRGVGPLKDHIYLHLNHLPPDVLKERLPGISET
Sbjct: 316 MERYAPTAKDLASRDVVSRSMTMEIREGRGVGPLKDHIYLHLNHLPPDVLKERLPGISET 375

Query: 111 AAIFAGVDVTKEPIPVLPTVHYNMGGIPTNYHGEVVTVKGNDPDAVVPGLMAAGEAACAS 170
           AAIFAGVDVTKEPIPVLPTVHYNMGGIPTN+HGEV+T+KG+DPDAVVPGLMAAGE ACAS
Sbjct: 376 AAIFAGVDVTKEPIPVLPTVHYNMGGIPTNHHGEVITIKGDDPDAVVPGLMAAGETACAS 435

Query: 171 VHGANRLGANSLLDIVVFGRACANRVAEINRPG 203
           VHGANRLGANSLLDIVVFGRACANRV+EI RPG
Sbjct: 436 VHGANRLGANSLLDIVVFGRACANRVSEIQRPG 468


>Glyma11g07250.1 
          Length = 630

 Score =  305 bits (780), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 145/153 (94%), Positives = 151/153 (98%)

Query: 51  MERYAPTAKDLASRDVVSRSMTMEIREGRGVGPLKDHIYLHLNHLPPDVLKERLPGISET 110
           MERYAPTAKDLASRDVVSR+MTMEIREGRGVGPLKDHIYLHLNHLPPDVLKERLPGISET
Sbjct: 312 MERYAPTAKDLASRDVVSRAMTMEIREGRGVGPLKDHIYLHLNHLPPDVLKERLPGISET 371

Query: 111 AAIFAGVDVTKEPIPVLPTVHYNMGGIPTNYHGEVVTVKGNDPDAVVPGLMAAGEAACAS 170
           AAIFAGVDVTKEPIPVLPTVHYNMGGIPTN++GEVVT+KG++PDAVVPGLMAAGE ACAS
Sbjct: 372 AAIFAGVDVTKEPIPVLPTVHYNMGGIPTNHYGEVVTIKGDNPDAVVPGLMAAGETACAS 431

Query: 171 VHGANRLGANSLLDIVVFGRACANRVAEINRPG 203
           VHGANRLGANSLLDIVVFGRACANRVAEI RPG
Sbjct: 432 VHGANRLGANSLLDIVVFGRACANRVAEIRRPG 464


>Glyma11g07250.2 
          Length = 543

 Score =  304 bits (778), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 145/153 (94%), Positives = 151/153 (98%)

Query: 51  MERYAPTAKDLASRDVVSRSMTMEIREGRGVGPLKDHIYLHLNHLPPDVLKERLPGISET 110
           MERYAPTAKDLASRDVVSR+MTMEIREGRGVGPLKDHIYLHLNHLPPDVLKERLPGISET
Sbjct: 225 MERYAPTAKDLASRDVVSRAMTMEIREGRGVGPLKDHIYLHLNHLPPDVLKERLPGISET 284

Query: 111 AAIFAGVDVTKEPIPVLPTVHYNMGGIPTNYHGEVVTVKGNDPDAVVPGLMAAGEAACAS 170
           AAIFAGVDVTKEPIPVLPTVHYNMGGIPTN++GEVVT+KG++PDAVVPGLMAAGE ACAS
Sbjct: 285 AAIFAGVDVTKEPIPVLPTVHYNMGGIPTNHYGEVVTIKGDNPDAVVPGLMAAGETACAS 344

Query: 171 VHGANRLGANSLLDIVVFGRACANRVAEINRPG 203
           VHGANRLGANSLLDIVVFGRACANRVAEI RPG
Sbjct: 345 VHGANRLGANSLLDIVVFGRACANRVAEIRRPG 377


>Glyma01g38200.2 
          Length = 544

 Score =  302 bits (773), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 144/153 (94%), Positives = 150/153 (98%)

Query: 51  MERYAPTAKDLASRDVVSRSMTMEIREGRGVGPLKDHIYLHLNHLPPDVLKERLPGISET 110
           MERYAPTAKDLASRDVVSR+MTMEIREGRGVGPLKDHIYLHLNHLPPDVLKERLPGISET
Sbjct: 312 MERYAPTAKDLASRDVVSRAMTMEIREGRGVGPLKDHIYLHLNHLPPDVLKERLPGISET 371

Query: 111 AAIFAGVDVTKEPIPVLPTVHYNMGGIPTNYHGEVVTVKGNDPDAVVPGLMAAGEAACAS 170
           AAIFAGVDVTKEPIPVLPTVHYNMGGIPTN++GEVVT+KG++PDAVV GLMAAGE ACAS
Sbjct: 372 AAIFAGVDVTKEPIPVLPTVHYNMGGIPTNHYGEVVTIKGDNPDAVVSGLMAAGETACAS 431

Query: 171 VHGANRLGANSLLDIVVFGRACANRVAEINRPG 203
           VHGANRLGANSLLDIVVFGRACANRVAEI RPG
Sbjct: 432 VHGANRLGANSLLDIVVFGRACANRVAEIRRPG 464


>Glyma01g38200.1 
          Length = 630

 Score =  301 bits (772), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 144/153 (94%), Positives = 150/153 (98%)

Query: 51  MERYAPTAKDLASRDVVSRSMTMEIREGRGVGPLKDHIYLHLNHLPPDVLKERLPGISET 110
           MERYAPTAKDLASRDVVSR+MTMEIREGRGVGPLKDHIYLHLNHLPPDVLKERLPGISET
Sbjct: 312 MERYAPTAKDLASRDVVSRAMTMEIREGRGVGPLKDHIYLHLNHLPPDVLKERLPGISET 371

Query: 111 AAIFAGVDVTKEPIPVLPTVHYNMGGIPTNYHGEVVTVKGNDPDAVVPGLMAAGEAACAS 170
           AAIFAGVDVTKEPIPVLPTVHYNMGGIPTN++GEVVT+KG++PDAVV GLMAAGE ACAS
Sbjct: 372 AAIFAGVDVTKEPIPVLPTVHYNMGGIPTNHYGEVVTIKGDNPDAVVSGLMAAGETACAS 431

Query: 171 VHGANRLGANSLLDIVVFGRACANRVAEINRPG 203
           VHGANRLGANSLLDIVVFGRACANRVAEI RPG
Sbjct: 432 VHGANRLGANSLLDIVVFGRACANRVAEIRRPG 464


>Glyma05g08550.1 
          Length = 647

 Score = 94.0 bits (232), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 53/143 (37%), Positives = 79/143 (55%), Gaps = 19/143 (13%)

Query: 51  MERYAP---TAKDLASRDVVSRSMTMEIREGRGVGPLKDHIYLHLNHLPPDVLKERLPGI 107
           MER+ P      +LA RDVV+RS+  ++++       + ++ L ++H P + +    P I
Sbjct: 354 MERFMPLYDERAELAPRDVVARSIDDQLKKRH-----EKYVLLDISHKPKEEILSHFPNI 408

Query: 108 SETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNYHGEVVTVKGNDPDAVVPGLMAAGEAA 167
           + T   + G+D+T+ PIPV+P  HY  GG+     GE            V GL  AGE A
Sbjct: 409 ASTCLQY-GLDITRRPIPVVPAAHYMCGGVQAGLQGETN----------VKGLYVAGEVA 457

Query: 168 CASVHGANRLGANSLLDIVVFGR 190
           C  +HGANRL +NSLL+ +VF R
Sbjct: 458 CTGLHGANRLASNSLLEALVFAR 480