Jatropha Genome Database

JcCA0269021.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0269021.10 + phase: 0 /pseudo
         (226 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma09g21050.1                                                       240   8e-64
Glyma02g40470.1                                                       239   2e-63
Glyma02g40470.3                                                       238   3e-63
Glyma02g40470.2                                                       237   6e-63
Glyma07g23190.1                                                       104   6e-23

>Glyma09g21050.1 
          Length = 377

 Score =  240 bits (613), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 112/141 (79%), Positives = 124/141 (87%)

Query: 34  RRIVRMSATATRNPNTMFESVTIQPPLHPTYDLKGVIKLALAEDAGDQGDVTCMATIPLD 93
           RR+V+MSAT   +    +ES  I+PP HPTYDLKG+IKLAL EDAGD+GDVTC+ATIP D
Sbjct: 44  RRVVKMSATEVTSSRISYESFAIKPPEHPTYDLKGIIKLALEEDAGDRGDVTCLATIPFD 103

Query: 94  MEVEAHFLAKEDGIIAGIALTEMIFHEVDPSLKVEWSQKDGDCVHRGLQFGRVSGQAHNI 153
           MEVEA+FLAKEDGIIAGIAL EMIFHEVDPSLKVEWS+ DGD VH+GLQFGRV G+AHNI
Sbjct: 104 MEVEAYFLAKEDGIIAGIALAEMIFHEVDPSLKVEWSKNDGDFVHKGLQFGRVRGRAHNI 163

Query: 154 VVAERVALNFMQRMSGIATLT 174
           VVAERV LNFMQRMSGIATLT
Sbjct: 164 VVAERVVLNFMQRMSGIATLT 184


>Glyma02g40470.1 
          Length = 377

 Score =  239 bits (610), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 111/141 (78%), Positives = 123/141 (87%)

Query: 34  RRIVRMSATATRNPNTMFESVTIQPPLHPTYDLKGVIKLALAEDAGDQGDVTCMATIPLD 93
           RR+V+MSAT   +    +ES  I+PP HPTYDLKG+IKLAL EDAGD+GDVTC+ATIP D
Sbjct: 44  RRVVKMSATEVTSSRISYESFAIKPPEHPTYDLKGIIKLALEEDAGDRGDVTCLATIPFD 103

Query: 94  MEVEAHFLAKEDGIIAGIALTEMIFHEVDPSLKVEWSQKDGDCVHRGLQFGRVSGQAHNI 153
           MEVEA+FLAKEDGIIAGIAL EMIFHEVDPSLKVEWS+ DGD VH+GLQFGRV G+AHNI
Sbjct: 104 MEVEAYFLAKEDGIIAGIALAEMIFHEVDPSLKVEWSKNDGDFVHKGLQFGRVHGRAHNI 163

Query: 154 VVAERVALNFMQRMSGIATLT 174
           VVAERV LNFMQRMSG ATLT
Sbjct: 164 VVAERVVLNFMQRMSGTATLT 184


>Glyma02g40470.3 
          Length = 330

 Score =  238 bits (608), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 111/141 (78%), Positives = 123/141 (87%)

Query: 34  RRIVRMSATATRNPNTMFESVTIQPPLHPTYDLKGVIKLALAEDAGDQGDVTCMATIPLD 93
           RR+V+MSAT   +    +ES  I+PP HPTYDLKG+IKLAL EDAGD+GDVTC+ATIP D
Sbjct: 44  RRVVKMSATEVTSSRISYESFAIKPPEHPTYDLKGIIKLALEEDAGDRGDVTCLATIPFD 103

Query: 94  MEVEAHFLAKEDGIIAGIALTEMIFHEVDPSLKVEWSQKDGDCVHRGLQFGRVSGQAHNI 153
           MEVEA+FLAKEDGIIAGIAL EMIFHEVDPSLKVEWS+ DGD VH+GLQFGRV G+AHNI
Sbjct: 104 MEVEAYFLAKEDGIIAGIALAEMIFHEVDPSLKVEWSKNDGDFVHKGLQFGRVHGRAHNI 163

Query: 154 VVAERVALNFMQRMSGIATLT 174
           VVAERV LNFMQRMSG ATLT
Sbjct: 164 VVAERVVLNFMQRMSGTATLT 184


>Glyma02g40470.2 
          Length = 339

 Score =  237 bits (605), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 111/141 (78%), Positives = 123/141 (87%)

Query: 34  RRIVRMSATATRNPNTMFESVTIQPPLHPTYDLKGVIKLALAEDAGDQGDVTCMATIPLD 93
           RR+V+MSAT   +    +ES  I+PP HPTYDLKG+IKLAL EDAGD+GDVTC+ATIP D
Sbjct: 44  RRVVKMSATEVTSSRISYESFAIKPPEHPTYDLKGIIKLALEEDAGDRGDVTCLATIPFD 103

Query: 94  MEVEAHFLAKEDGIIAGIALTEMIFHEVDPSLKVEWSQKDGDCVHRGLQFGRVSGQAHNI 153
           MEVEA+FLAKEDGIIAGIAL EMIFHEVDPSLKVEWS+ DGD VH+GLQFGRV G+AHNI
Sbjct: 104 MEVEAYFLAKEDGIIAGIALAEMIFHEVDPSLKVEWSKNDGDFVHKGLQFGRVHGRAHNI 163

Query: 154 VVAERVALNFMQRMSGIATLT 174
           VVAERV LNFMQRMSG ATLT
Sbjct: 164 VVAERVVLNFMQRMSGTATLT 184


>Glyma07g23190.1 
          Length = 237

 Score =  104 bits (260), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 60/108 (55%), Positives = 71/108 (65%), Gaps = 18/108 (16%)

Query: 68  GVIKLALAEDAGDQGDVTCMATIPLDMEVEAHFLAKEDGIIAGIALTEMIFHEVDPSLKV 127
           G+IKLAL EDAGDQ DVTC+ATIP DMEV+A+FLAKEDGII GIAL EMIFH        
Sbjct: 1   GIIKLALEEDAGDQCDVTCLATIPFDMEVDAYFLAKEDGIIVGIALAEMIFH-------- 52

Query: 128 EWSQKDGDCVHRGLQFGRV-SGQAHNIVVAERVALNFMQRMSGIATLT 174
           EWS         G++   + S + +N+      +   MQRMSGIATLT
Sbjct: 53  EWS---------GVKMMEILSIKGYNLEEFTISSAKLMQRMSGIATLT 91