Jatropha Genome Database

JcCA0265541.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0265541.10 + phase: 1 /pseudo/partial
         (159 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma15g03120.1                                                       227   5e-60
Glyma13g42270.1                                                       226   6e-60
Glyma17g05980.1                                                       210   4e-55

>Glyma15g03120.1 
          Length = 519

 Score =  227 bits (578), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 110/130 (84%), Positives = 120/130 (92%)

Query: 27  FASAIQIGDPVSIDRAVYALKNSNGIVEEATEEELMDAMAQADSTGMFICPHTGVALTAL 86
           FASAIQIGDPVSIDRAV+ALK+ +GIVEEATEEELMDA AQADSTGMFICPHTGVALTAL
Sbjct: 388 FASAIQIGDPVSIDRAVHALKSCDGIVEEATEEELMDATAQADSTGMFICPHTGVALTAL 447

Query: 87  NKLRNSGVIGPMDRTVVVSTAHGLKFTQSKIDYHSKAIPDMACRFANPPVQVKAEFGAVM 146
            KLRNSGVI   DRTVVVSTAHGLKFTQSKIDYHSK I DMACR+ANPP+QVKA+FG+VM
Sbjct: 448 FKLRNSGVIKATDRTVVVSTAHGLKFTQSKIDYHSKDIKDMACRYANPPMQVKADFGSVM 507

Query: 147 DVLKNFLGNR 156
           DVLK +L ++
Sbjct: 508 DVLKTYLQSK 517


>Glyma13g42270.1 
          Length = 511

 Score =  226 bits (577), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 109/131 (83%), Positives = 120/131 (91%)

Query: 27  FASAIQIGDPVSIDRAVYALKNSNGIVEEATEEELMDAMAQADSTGMFICPHTGVALTAL 86
           FASAIQIGDPVSIDRAV+ALK+ +GIVEEATEEELMDA AQADSTGMFICPHTGVALTAL
Sbjct: 380 FASAIQIGDPVSIDRAVHALKSCDGIVEEATEEELMDATAQADSTGMFICPHTGVALTAL 439

Query: 87  NKLRNSGVIGPMDRTVVVSTAHGLKFTQSKIDYHSKAIPDMACRFANPPVQVKAEFGAVM 146
            KLRNSG+I   DRTVVVSTAHGLKFTQSKIDYHSK I DMACR+ANPP+QVKA+FG+VM
Sbjct: 440 FKLRNSGLIKATDRTVVVSTAHGLKFTQSKIDYHSKDIKDMACRYANPPMQVKADFGSVM 499

Query: 147 DVLKNFLGNRV 157
           DVLK +L ++ 
Sbjct: 500 DVLKTYLQSKT 510


>Glyma17g05980.1 
          Length = 533

 Score =  210 bits (535), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 105/132 (79%), Positives = 114/132 (86%), Gaps = 1/132 (0%)

Query: 27  FASAIQIGDPVSIDRAVYALKNSNGIVEEATEEELMDAMAQADSTGMFICPHTGVALTAL 86
           FASAIQIGDPVSIDRAV+AL+N+ GIVEEATEEELMDAM QADSTGMFICPHTGVAL AL
Sbjct: 398 FASAIQIGDPVSIDRAVHALRNTEGIVEEATEEELMDAMVQADSTGMFICPHTGVALAAL 457

Query: 87  NKLRNSGVIGPMDRTVVVSTAHGLKFTQSKIDYHSKAIPDMACRFANPPVQVKAEFGAVM 146
            KLRN GVIG  +R VVVSTAHGLKF QSKIDYHS  IP M  R+ANP V VKA+FG+VM
Sbjct: 458 IKLRNRGVIGAGERVVVVSTAHGLKFAQSKIDYHSGLIPGMG-RYANPLVSVKADFGSVM 516

Query: 147 DVLKNFLGNRVP 158
           DVLK+FL N+ P
Sbjct: 517 DVLKDFLHNKSP 528