Jatropha Genome Database

JcCA0265291.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0265291.10 - phase: 0 /pseudo/partial
         (165 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma10g06740.1                                                       140   8e-34
Glyma13g20930.1                                                       139   1e-33
Glyma19g36990.1                                                       137   4e-33
Glyma03g34300.1                                                       137   5e-33
Glyma19g36990.2                                                       137   7e-33
Glyma15g04290.2                                                        87   1e-17
Glyma15g04290.1                                                        86   1e-17
Glyma13g41120.1                                                        86   2e-17
Glyma04g34480.1                                                        79   2e-15
Glyma17g23080.1                                                        77   7e-15
Glyma15g20300.1                                                        58   5e-09
Glyma20g04390.1                                                        56   2e-08

>Glyma10g06740.1 
          Length = 304

 Score =  140 bits (352), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 67/85 (78%), Positives = 74/85 (87%), Gaps = 1/85 (1%)

Query: 40  DVVVAPPFVYIDQVKSSLTDRIEISGQNSWVSKGGAFTGEISVEQLKDIGCKWVILGHSE 99
           DVVVAPPFVYIDQVK+S+TDRIEIS QNSWV KGGAFTGEISVEQLKD+GCKWVILGHSE
Sbjct: 87  DVVVAPPFVYIDQVKNSITDRIEISAQNSWVGKGGAFTGEISVEQLKDLGCKWVILGHSE 146

Query: 100 RRHIIGEKDEVQIG*KCFFEWFQGV 124
           RRH+IGE DE  IG K  +   +G+
Sbjct: 147 RRHVIGENDEF-IGKKAVYALSEGL 170


>Glyma13g20930.1 
          Length = 305

 Score =  139 bits (350), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 67/85 (78%), Positives = 74/85 (87%), Gaps = 1/85 (1%)

Query: 40  DVVVAPPFVYIDQVKSSLTDRIEISGQNSWVSKGGAFTGEISVEQLKDIGCKWVILGHSE 99
           DVVVAPPFVYIDQVK+S+TDRIEIS QNSWV KGGAFTGEISVEQLKD+GCKWVILGHSE
Sbjct: 88  DVVVAPPFVYIDQVKNSITDRIEISAQNSWVGKGGAFTGEISVEQLKDLGCKWVILGHSE 147

Query: 100 RRHIIGEKDEVQIG*KCFFEWFQGV 124
           RRH+IGE DE  IG K  +   +G+
Sbjct: 148 RRHVIGENDEF-IGKKTAYALSEGL 171


>Glyma19g36990.1 
          Length = 309

 Score =  137 bits (346), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 66/85 (77%), Positives = 73/85 (85%), Gaps = 1/85 (1%)

Query: 40  DVVVAPPFVYIDQVKSSLTDRIEISGQNSWVSKGGAFTGEISVEQLKDIGCKWVILGHSE 99
           DVVVAPPF+YIDQVK+SLT+RIEIS QNSWV KGGAFTGEIS EQLKD+GCKWV+LGHSE
Sbjct: 92  DVVVAPPFLYIDQVKNSLTERIEISAQNSWVGKGGAFTGEISAEQLKDLGCKWVVLGHSE 151

Query: 100 RRHIIGEKDEVQIG*KCFFEWFQGV 124
           RRHIIGE DE  IG K  +   QG+
Sbjct: 152 RRHIIGENDEF-IGKKAAYALSQGL 175


>Glyma03g34300.1 
          Length = 309

 Score =  137 bits (345), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 65/85 (76%), Positives = 73/85 (85%), Gaps = 1/85 (1%)

Query: 40  DVVVAPPFVYIDQVKSSLTDRIEISGQNSWVSKGGAFTGEISVEQLKDIGCKWVILGHSE 99
           DVVVAPPF+YIDQVK+SLT+RIEIS QNSWV KGGAFTGEIS EQLKD+GCKWV+LGHSE
Sbjct: 92  DVVVAPPFLYIDQVKNSLTERIEISAQNSWVGKGGAFTGEISAEQLKDLGCKWVVLGHSE 151

Query: 100 RRHIIGEKDEVQIG*KCFFEWFQGV 124
           RRH+IGE DE  IG K  +   QG+
Sbjct: 152 RRHVIGENDEF-IGKKAAYALSQGL 175


>Glyma19g36990.2 
          Length = 306

 Score =  137 bits (344), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 66/85 (77%), Positives = 73/85 (85%), Gaps = 1/85 (1%)

Query: 40  DVVVAPPFVYIDQVKSSLTDRIEISGQNSWVSKGGAFTGEISVEQLKDIGCKWVILGHSE 99
           DVVVAPPF+YIDQVK+SLT+RIEIS QNSWV KGGAFTGEIS EQLKD+GCKWV+LGHSE
Sbjct: 92  DVVVAPPFLYIDQVKNSLTERIEISAQNSWVGKGGAFTGEISAEQLKDLGCKWVVLGHSE 151

Query: 100 RRHIIGEKDEVQIG*KCFFEWFQGV 124
           RRHIIGE DE  IG K  +   QG+
Sbjct: 152 RRHIIGENDEF-IGKKAAYALSQGL 175


>Glyma15g04290.2 
          Length = 191

 Score = 86.7 bits (213), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 42/86 (48%), Positives = 58/86 (67%), Gaps = 1/86 (1%)

Query: 40  DVVVAPPFVYIDQVKSSLTDRIEISGQNSWVSKGGAFTGEISVEQLKDIGCKWVILGHSE 99
           +VVV+PPFV++  VKS L     +S QN WV KGGA+TGE+S E L ++G  WVI+GHSE
Sbjct: 39  EVVVSPPFVFLPVVKSLLRPDFHVSAQNCWVRKGGAYTGEVSAEMLVNLGIPWVIIGHSE 98

Query: 100 RRHIIGEKDEVQIG*KCFFEWFQGVN 125
           RR ++ E +E  +G K  +   QG+ 
Sbjct: 99  RRQLLNESNEF-VGDKVAYALQQGLK 123


>Glyma15g04290.1 
          Length = 253

 Score = 86.3 bits (212), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 42/85 (49%), Positives = 58/85 (68%), Gaps = 1/85 (1%)

Query: 40  DVVVAPPFVYIDQVKSSLTDRIEISGQNSWVSKGGAFTGEISVEQLKDIGCKWVILGHSE 99
           +VVV+PPFV++  VKS L     +S QN WV KGGA+TGE+S E L ++G  WVI+GHSE
Sbjct: 39  EVVVSPPFVFLPVVKSLLRPDFHVSAQNCWVRKGGAYTGEVSAEMLVNLGIPWVIIGHSE 98

Query: 100 RRHIIGEKDEVQIG*KCFFEWFQGV 124
           RR ++ E +E  +G K  +   QG+
Sbjct: 99  RRQLLNESNEF-VGDKVAYALQQGL 122


>Glyma13g41120.1 
          Length = 246

 Score = 85.5 bits (210), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 42/86 (48%), Positives = 58/86 (67%), Gaps = 1/86 (1%)

Query: 40  DVVVAPPFVYIDQVKSSLTDRIEISGQNSWVSKGGAFTGEISVEQLKDIGCKWVILGHSE 99
           +VVV+PPFV++  VKS L     +S QN WV KGGA+TGE+S E L ++G  WVI+GHSE
Sbjct: 74  EVVVSPPFVFLPFVKSLLRPDFHVSAQNCWVRKGGAYTGEVSAEMLVNLGIPWVIIGHSE 133

Query: 100 RRHIIGEKDEVQIG*KCFFEWFQGVN 125
           RR ++ E +E  +G K  +   QG+ 
Sbjct: 134 RRQLLNESNEF-VGDKVAYALQQGLK 158


>Glyma04g34480.1 
          Length = 175

 Score = 79.3 bits (194), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 35/46 (76%), Positives = 41/46 (89%)

Query: 37 NWADVVVAPPFVYIDQVKSSLTDRIEISGQNSWVSKGGAFTGEISV 82
          ++ DVVVAPPFVYIDQVK+S++DRIE S QNSWV KGGAFTGEI +
Sbjct: 38 DFTDVVVAPPFVYIDQVKNSISDRIETSAQNSWVGKGGAFTGEIRM 83


>Glyma17g23080.1 
          Length = 146

 Score = 77.4 bits (189), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 35/43 (81%), Positives = 39/43 (90%)

Query: 38 WADVVVAPPFVYIDQVKSSLTDRIEISGQNSWVSKGGAFTGEI 80
          + DVVVAPPFVYIDQVK+S++DRIEIS QNSWV K GAFTGEI
Sbjct: 44 YTDVVVAPPFVYIDQVKNSISDRIEISAQNSWVGKDGAFTGEI 86


>Glyma15g20300.1 
          Length = 34

 Score = 57.8 bits (138), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 26/33 (78%), Positives = 30/33 (90%)

Query: 40 DVVVAPPFVYIDQVKSSLTDRIEISGQNSWVSK 72
          DVVVAPPFVYIDQVK+S+++RIE S QNSWV K
Sbjct: 1  DVVVAPPFVYIDQVKNSISNRIETSAQNSWVGK 33


>Glyma20g04390.1 
          Length = 34

 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 25/33 (75%), Positives = 29/33 (87%)

Query: 40 DVVVAPPFVYIDQVKSSLTDRIEISGQNSWVSK 72
          DVVV PPFVYIDQVK+S+++RIE S QNSWV K
Sbjct: 1  DVVVKPPFVYIDQVKNSISNRIETSAQNSWVGK 33