Jatropha Genome Database

JcCA0264961.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0264961.10 - phase: 2 /TE/partial
         (240 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma03g33900.1                                                       271   7e-73
Glyma05g26180.1                                                        74   2e-13
Glyma05g26180.2                                                        73   3e-13
Glyma08g09120.1                                                        72   4e-13
Glyma06g06720.2                                                        61   1e-09
Glyma06g06720.1                                                        60   2e-09
Glyma04g06630.1                                                        56   3e-08

>Glyma03g33900.1 
          Length = 1587

 Score =  271 bits (692), Expect = 7e-73,   Method: Compositional matrix adjust.
 Identities = 137/254 (53%), Positives = 170/254 (66%), Gaps = 17/254 (6%)

Query: 2   CVGKGCQRSYHLSCLNPPLVTAPPGVWHCTFCVEKKMNMGVHSVSKGVESVWAVREVASD 61
           C GKGCQR YH SC++PPL   P G WHC +C +KKM +GVHSVSKGV+S+   REV S 
Sbjct: 57  CSGKGCQRRYHPSCVDPPLNYIPLGFWHCIWCTKKKMELGVHSVSKGVKSILDSREVVSK 116

Query: 62  NEGKQKHKEYLVKHQGLAHVHNLWIPEKELLLEAPTRVAKFNRRSQATS-WKTEWSIPQR 120
           N+  Q+  EY V + GLAH HN WIPE +LLLEAP  +AKF R+ Q T+ WK +WSIP R
Sbjct: 117 NKVMQR--EYFVTYHGLAHAHNRWIPESKLLLEAPKLLAKFKRKLQVTTRWKRDWSIPHR 174

Query: 121 LLQKRQLSFSK--------HRTNG------WLVKWTGLSYDHATWELENASFLTSPEARK 166
           LL KR++ FSK        H  NG      WLVKW GL YD+ATWEL++ASFLTSPE RK
Sbjct: 175 LLLKREIVFSKQNDQHFDGHGDNGSNCRYEWLVKWRGLGYDNATWELDDASFLTSPEGRK 234

Query: 167 LIQDYEDGHAKAERKDYENCHDKADKMQSLSQANELSSGDSPGAYNHYLKYVNKLREHWY 226
           +I DYE    +AER    +     ++  S S+ + L +GDSPG YN +L YVNKLR  W+
Sbjct: 235 VIDDYESRRKRAERLSKNHFEANEERKASFSELSVLPTGDSPGFYNQHLTYVNKLRMCWH 294

Query: 227 KGHNAIVFYDQADQ 240
           KG +A++  DQ DQ
Sbjct: 295 KGQSALIVDDQIDQ 308


>Glyma05g26180.1 
          Length = 2340

 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 62/192 (32%), Positives = 90/192 (46%), Gaps = 25/192 (13%)

Query: 55  VREVASDNEGKQKHKEYLVKHQGLAHVHNLWIPEKELLLEAPTRVAKFNRRSQATSWKT- 113
           V E A  N G+Q   E+LVK  G +H+HN WI E +L + A  ++  +  +   T     
Sbjct: 677 VVECAGPN-GEQVFYEFLVKWVGKSHIHNSWISESQLKVLAKRKLENYKAKYGMTIINIC 735

Query: 114 --EWSIPQRLLQKRQLSFSKHRTNGWLVKWTGLSYDHATWE------LENASFLTS---- 161
              W  PQR+L  R    SKH T+   +KWTGL YD  TWE      L+ +S L +    
Sbjct: 736 EEHWKQPQRVLALRT---SKHGTSEAFIKWTGLPYDECTWESLDEPVLQISSHLITLFNK 792

Query: 162 PEARKLIQDYEDGHAKAERKDYENCHDKADKMQSLSQANELSSGDSPGAYNHYLKYVNKL 221
            E   L +D    ++  +  D++N     D      Q  +L  G     + H L+ +N L
Sbjct: 793 LETLTLERDSSKENSTRKSNDHQN-----DIFNLTEQPEDLKGG---SLFPHQLEALNWL 844

Query: 222 REHWYKGHNAIV 233
           R+ WYK  N I+
Sbjct: 845 RKCWYKSKNVIL 856


>Glyma05g26180.2 
          Length = 1683

 Score = 73.2 bits (178), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 62/192 (32%), Positives = 90/192 (46%), Gaps = 25/192 (13%)

Query: 55  VREVASDNEGKQKHKEYLVKHQGLAHVHNLWIPEKELLLEAPTRVAKFNRRSQATSWKT- 113
           V E A  N G+Q   E+LVK  G +H+HN WI E +L + A  ++  +  +   T     
Sbjct: 20  VVECAGPN-GEQVFYEFLVKWVGKSHIHNSWISESQLKVLAKRKLENYKAKYGMTIINIC 78

Query: 114 --EWSIPQRLLQKRQLSFSKHRTNGWLVKWTGLSYDHATWE------LENASFLTS---- 161
              W  PQR+L  R    SKH T+   +KWTGL YD  TWE      L+ +S L +    
Sbjct: 79  EEHWKQPQRVLALRT---SKHGTSEAFIKWTGLPYDECTWESLDEPVLQISSHLITLFNK 135

Query: 162 PEARKLIQDYEDGHAKAERKDYENCHDKADKMQSLSQANELSSGDSPGAYNHYLKYVNKL 221
            E   L +D    ++  +  D++N     D      Q  +L  G     + H L+ +N L
Sbjct: 136 LETLTLERDSSKENSTRKSNDHQN-----DIFNLTEQPEDLKGG---SLFPHQLEALNWL 187

Query: 222 REHWYKGHNAIV 233
           R+ WYK  N I+
Sbjct: 188 RKCWYKSKNVIL 199


>Glyma08g09120.1 
          Length = 2212

 Score = 72.4 bits (176), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 61/192 (31%), Positives = 90/192 (46%), Gaps = 25/192 (13%)

Query: 55  VREVASDNEGKQKHKEYLVKHQGLAHVHNLWIPEKELLLEAPTRVAKFNRRSQATSWKT- 113
           + E A  N G+Q   E+LVK  G +H+HN WI E +L + A  ++  +  +   T     
Sbjct: 516 IAECAGPN-GEQVFYEFLVKWVGKSHIHNSWISESQLKVLAKRKLENYKAKYGMTIINIC 574

Query: 114 --EWSIPQRLLQKRQLSFSKHRTNGWLVKWTGLSYDHATWE------LENASFLTS---- 161
              W  PQR+L  R    SKH T+   +KWTGL YD  TWE      L+ +S L +    
Sbjct: 575 EERWKQPQRVLALRT---SKHGTSEAFIKWTGLPYDECTWESLDEPVLQISSHLITLFNK 631

Query: 162 PEARKLIQDYEDGHAKAERKDYENCHDKADKMQSLSQANELSSGDSPGAYNHYLKYVNKL 221
            E   L +D    ++  +  D++N     D      Q  +L  G     + H L+ +N L
Sbjct: 632 LETLTLERDSSKENSTRKSNDHQN-----DIFNLTEQPEDLKGG---SLFPHQLEALNWL 683

Query: 222 REHWYKGHNAIV 233
           R+ WYK  N I+
Sbjct: 684 RKCWYKSKNVIL 695


>Glyma06g06720.2 
          Length = 1342

 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 68/253 (26%), Positives = 105/253 (41%), Gaps = 38/253 (15%)

Query: 7   CQRSYHLSCLNPPLVTAPPGVWHCTFCVEKKMNMGVHSVSKGVESVWAVREVASDNEGKQ 66
           C  +YH  CL PPL    P  W C  CV       ++ + K ++        A+DN+  +
Sbjct: 69  CTYAYHPKCLLPPLKGPLPDNWRCPECVSP-----LNDIDKILDCEMRP-TTAADNDATK 122

Query: 67  KH------KEYLVKHQGLAHVHNLWIPEKELLL------EAPTRVAKFNRRSQA------ 108
                   K+YLVK +GL+++H  W+PEKE L          T+V  F+++  +      
Sbjct: 123 LGSKQIFVKQYLVKWKGLSYLHCTWVPEKEFLKAFKTHPRLKTKVNNFHQKMASVNTSDE 182

Query: 109 --TSWKTEWSIPQRLLQKRQLSFSKHRTNGWLVKWTGLSYDHATWELENASFLTSPEARK 166
              + + EW+   R+L  R           +LVKW  L YD   WE E+      PE  +
Sbjct: 183 DFVAIRPEWTTVDRILACR----GDDDEREYLVKWKELPYDECYWEFESDISAFQPEIER 238

Query: 167 LIQ------DYEDGHAKAERKDYENCHDKADKMQSLSQANELSSGDSPGAYNHYLKYVNK 220
             +       +  G  K   KD      +  + Q   Q+ E  SG +   Y   L+ +N 
Sbjct: 239 FNRLRSRSSKFSSGKQKNSVKDDAELKKQQKEFQHYEQSPEFLSGGTLHPYQ--LEGLNF 296

Query: 221 LREHWYKGHNAIV 233
           LR  W K  + I+
Sbjct: 297 LRFSWSKQTHVIL 309


>Glyma06g06720.1 
          Length = 1440

 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 68/253 (26%), Positives = 105/253 (41%), Gaps = 38/253 (15%)

Query: 7   CQRSYHLSCLNPPLVTAPPGVWHCTFCVEKKMNMGVHSVSKGVESVWAVREVASDNEGKQ 66
           C  +YH  CL PPL    P  W C  CV       ++ + K ++        A+DN+  +
Sbjct: 69  CTYAYHPKCLLPPLKGPLPDNWRCPECVSP-----LNDIDKILDCEMRPT-TAADNDATK 122

Query: 67  KH------KEYLVKHQGLAHVHNLWIPEKELLL------EAPTRVAKFNRRSQA------ 108
                   K+YLVK +GL+++H  W+PEKE L          T+V  F+++  +      
Sbjct: 123 LGSKQIFVKQYLVKWKGLSYLHCTWVPEKEFLKAFKTHPRLKTKVNNFHQKMASVNTSDE 182

Query: 109 --TSWKTEWSIPQRLLQKRQLSFSKHRTNGWLVKWTGLSYDHATWELENASFLTSPEARK 166
              + + EW+   R+L  R           +LVKW  L YD   WE E+      PE  +
Sbjct: 183 DFVAIRPEWTTVDRILACR----GDDDEREYLVKWKELPYDECYWEFESDISAFQPEIER 238

Query: 167 LIQ------DYEDGHAKAERKDYENCHDKADKMQSLSQANELSSGDSPGAYNHYLKYVNK 220
             +       +  G  K   KD      +  + Q   Q+ E  SG +   Y   L+ +N 
Sbjct: 239 FNRLRSRSSKFSSGKQKNSVKDDAELKKQQKEFQHYEQSPEFLSGGTLHPYQ--LEGLNF 296

Query: 221 LREHWYKGHNAIV 233
           LR  W K  + I+
Sbjct: 297 LRFSWSKQTHVIL 309


>Glyma04g06630.1 
          Length = 1419

 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 68/253 (26%), Positives = 105/253 (41%), Gaps = 38/253 (15%)

Query: 7   CQRSYHLSCLNPPLVTAPPGVWHCTFCVEKKMNMGVHSVSKGVESVWAVREVASDNEGKQ 66
           C  +YH  CL PPL    P  W C  CV       ++ + K ++        A+DNE  +
Sbjct: 69  CTYAYHPRCLLPPLKGPLPDNWRCPECVSP-----LNDIDKILDCEMRPT-TAADNEATK 122

Query: 67  KH------KEYLVKHQGLAHVHNLWIPEKELLL------EAPTRVAKFNRRSQA------ 108
                   K+YLVK +GL+++H  W+PEKE L          T+V  F+++  +      
Sbjct: 123 LGSKQIFVKQYLVKWKGLSYLHCTWVPEKEFLKAFKTHPRLKTKVNNFHQKMASVNTSDE 182

Query: 109 --TSWKTEWSIPQRLLQKRQLSFSKHRTNGWLVKWTGLSYDHATWELENASFLTSPEARK 166
              + + EW+   R+L  R           +LVKW  L YD   WE E+      PE  +
Sbjct: 183 DFVAIRPEWTTVDRILACR----GDDDEREYLVKWKELPYDECYWEFESDISAFQPEIER 238

Query: 167 LIQDYEDGHAKAERKDYENCHDKAD------KMQSLSQANELSSGDSPGAYNHYLKYVNK 220
             +        +  K   +  D A+      + Q   Q+ E  SG +   Y   L+ +N 
Sbjct: 239 FNRLRSRSSKFSSSKQKNSVKDDAELKKQQKEFQHYEQSPEFLSGGTLHPYQ--LEGLNF 296

Query: 221 LREHWYKGHNAIV 233
           LR  W K  + I+
Sbjct: 297 LRFSWSKQTHVIL 309