Jatropha Genome Database

JcCA0264441.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0264441.10 - phase: 2 /pseudo/partial
         (203 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma07g38600.1                                                       125   2e-29
Glyma15g11030.1                                                       121   4e-28
Glyma17g02110.1                                                       121   5e-28
Glyma19g33660.1                                                        90   1e-18
Glyma13g28000.1                                                        76   2e-14

>Glyma07g38600.1 
          Length = 493

 Score =  125 bits (315), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 83/184 (45%), Positives = 95/184 (51%), Gaps = 11/184 (5%)

Query: 28  RVTSDMPLYDILNEFQKGXXXXXXXXXXXXXXXXX---------XXXXXXXGDSELNTPL 78
           RV SDMPLYDILNEFQKG                                 GDS+L TPL
Sbjct: 302 RVPSDMPLYDILNEFQKGSSHMAAVVKARGKGKETPQIIDEEKNEENKSIGGDSQLTTPL 361

Query: 79  LNKHDDKSESVIIDIEKAARPTTIKENLTLEPNGVATNMMPHLSXXXXXXXXXXXXTLED 138
           L K D KS SV++DI K ++P++I +   L+ +   TN  P  S            TLED
Sbjct: 362 LQKQDAKSGSVVVDIVKPSKPSSINKLSVLQRSDSTTNG-PS-SENIEDGEVIGIITLED 419

Query: 139 VFEELLQEEIVDETDVYVDVHKRIXXXXXXXXXXXXXXPSNRRLSGQKPAGGQGKQNNIP 198
           VFEELLQEEIVDETD YVDVHKRI              PS+RRL+ QK AG Q K    P
Sbjct: 420 VFEELLQEEIVDETDEYVDVHKRIRVAAAAAASSVARAPSSRRLTSQKGAGIQSKPGQAP 479

Query: 199 KKSG 202
           KKS 
Sbjct: 480 KKSA 483


>Glyma15g11030.1 
          Length = 489

 Score =  121 bits (304), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 80/184 (43%), Positives = 92/184 (50%), Gaps = 11/184 (5%)

Query: 28  RVTSDMPLYDILNEFQKGXXXXXXXXXX---------XXXXXXXXXXXXXXGDSELNTPL 78
           RV SDMPLYDILNEFQKG                                 GDS+L  PL
Sbjct: 299 RVPSDMPLYDILNEFQKGSSHMAAVVRARGKGKTIPETTDEETYEENKGVGGDSQLTAPL 358

Query: 79  LNKHDDKSESVIIDIEKAARPTTIKENLTLEPNGVATNMMPHLSXXXXXXXXXXXXTLED 138
           L K ++KSES I+DI+K +R  +I ++  L+ +    N     S            TLED
Sbjct: 359 LQKQNEKSESFIVDIDKFSRSPSINKSTGLQRSDSTRN--GSFSDNIEDGEVIGIITLED 416

Query: 139 VFEELLQEEIVDETDVYVDVHKRIXXXXXXXXXXXXXXPSNRRLSGQKPAGGQGKQNNIP 198
           VFEELLQEEIVDETD YVDVHKRI              PS RRL+ QK AGGQ K     
Sbjct: 417 VFEELLQEEIVDETDEYVDVHKRIRVAAAAAASSVARAPSIRRLTAQKGAGGQSKPGLTL 476

Query: 199 KKSG 202
           KKS 
Sbjct: 477 KKSA 480


>Glyma17g02110.1 
          Length = 493

 Score =  121 bits (304), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 82/184 (44%), Positives = 94/184 (51%), Gaps = 11/184 (5%)

Query: 28  RVTSDMPLYDILNEFQKGXXXXXXXXXXXXXXXXXXXXX---------XXXGDSELNTPL 78
           RV SDMPLYDILNEFQKG                                 GDS+L TPL
Sbjct: 302 RVPSDMPLYDILNEFQKGSSHMAAVVKARGKGKETPQIIDEEKNEENESIGGDSQLTTPL 361

Query: 79  LNKHDDKSESVIIDIEKAARPTTIKENLTLEPNGVATNMMPHLSXXXXXXXXXXXXTLED 138
           L K D KS SV++DI K ++P++I +   L+ +   TN  P  S            TLED
Sbjct: 362 LQKQDAKSGSVVVDIAKPSKPSSINKLSGLQRSDGTTNG-PS-SENIEDGEVIGIITLED 419

Query: 139 VFEELLQEEIVDETDVYVDVHKRIXXXXXXXXXXXXXXPSNRRLSGQKPAGGQGKQNNIP 198
           VFEELLQEEIVDETD YVDVHKRI              PS+RRL+ QK AG Q K     
Sbjct: 420 VFEELLQEEIVDETDEYVDVHKRIRVAAAAAASSVARAPSSRRLTNQKGAGIQSKPGQAQ 479

Query: 199 KKSG 202
           KKS 
Sbjct: 480 KKSA 483


>Glyma19g33660.1 
          Length = 477

 Score = 90.1 bits (222), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 68/171 (39%), Positives = 84/171 (49%), Gaps = 17/171 (9%)

Query: 28  RVTSDMPLYDILNEFQKGXXXXXXXXXXXXX---------XXXXXXXXXXXGDSELNTPL 78
           RV +DMPLYDILNEFQKG                                  +S+L  PL
Sbjct: 300 RVPADMPLYDILNEFQKGSSHMAAVVKVIRERNNPQSPNDTEKSKDKEVIKHNSQLTIPL 359

Query: 79  LNKHDDKSESVI-IDIEKAARPTTIKENLTLEPNGVATNMMPH-LSXXXXXXXXXXXXTL 136
           L++  +KSE+V+ ID  K A       +   + +G ATN + H L             TL
Sbjct: 360 LSRFYEKSENVVNIDKPKLA------ADQQFQKDGPATNGVYHSLDNAEDGEEVIGIITL 413

Query: 137 EDVFEELLQEEIVDETDVYVDVHKRIXXXXXXXXXXXXXXPSNRRLSGQKP 187
           EDVFEELLQEEIVDETDVY+DVH+RI              PS R+L+G KP
Sbjct: 414 EDVFEELLQEEIVDETDVYIDVHRRIRVAAVAAATSVARVPSGRKLTGHKP 464


>Glyma13g28000.1 
          Length = 437

 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 51/132 (38%), Positives = 69/132 (52%), Gaps = 6/132 (4%)

Query: 70  GDSELNTPLLNKHDDKSESVIIDIEKAARPTTIKENLTLEPNGVATNMMPHLSXXXXXXX 129
           GDS L TPLL K ++ SE+V+ +I+K +RP +I ++  L+ +   TN             
Sbjct: 256 GDSRLTTPLLQKQNEMSENVVANIDKFSRPPSINKSTGLQRSDSRTN---GSFSDNIEDE 312

Query: 130 XXXXXTLEDVFEELLQEEIVDETDVYVDVHKRIXXXXXXXXXXXXXXPSNRRLSGQKPAG 189
                TLEDVFEELLQEEIVDETD YVD    +              PS RRL+ QK A 
Sbjct: 313 VIGVITLEDVFEELLQEEIVDETDEYVD---NLNVTYFMAASSVARAPSIRRLTVQKGAW 369

Query: 190 GQGKQNNIPKKS 201
            +G    +  ++
Sbjct: 370 EEGGYTGVWVRA 381