Jatropha Genome Database

JcCA0264101.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0264101.10 + phase: 0 /partial
         (262 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma04g42590.1                                                       206   2e-53
Glyma14g24290.1                                                       190   1e-48
Glyma13g10120.1                                                       163   1e-40
Glyma11g12640.1                                                        63   3e-10
Glyma12g04840.1                                                        62   8e-10

>Glyma04g42590.1 
          Length = 401

 Score =  206 bits (525), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 132/264 (50%), Positives = 160/264 (60%), Gaps = 24/264 (9%)

Query: 1   VAFLASAVGPRVXXXXXXXXXXXXXEDNRMNSERLHSREGSFHGEVANSIQQKEGQNEAE 60
           VAFLASAVGPRV             EDN  ++ ++   E   H    N I          
Sbjct: 160 VAFLASAVGPRVAASCAHAALAVLSEDNSGSTSQM---EAPGHD---NRIT--------- 204

Query: 61  GGPVSXXXXXXXXXXXXXXXXXXXXXXXDHEEREIQRLSANIINHQLKRLELKLKQFAEV 120
             P+S                       DHEEREIQRL ANI+NHQLKRLELKLKQFAE+
Sbjct: 205 --PLSAEKVKDAAKAGLSAAAMKAKLFADHEEREIQRLCANIVNHQLKRLELKLKQFAEI 262

Query: 121 ETFLMRECEQVEKTRQRFAAERARMMSTRIGPAGSTSQMNLAGVGPSMVNNNISSNRQQ- 179
           ET LM+ECEQ+E+T+QR AA+R+R+MS R+G  G+T  MN +GVGPSM +N   +NRQQ 
Sbjct: 263 ETLLMKECEQLERTKQRCAADRSRIMSARLGTVGATPTMNASGVGPSMASN--GNNRQQM 320

Query: 180 VMPPSSQPNISGYGNNQQVHPHVSFMQRGQQQPMFPLGPRLPLAAIQPSSSAPSNVMFNA 239
           +   SSQP++SGYGNNQ VHPH+SF  R     MF LG RLPL+ IQ S  A S  MFNA
Sbjct: 321 ISASSSQPSVSGYGNNQPVHPHMSFAPR---PSMFGLGQRLPLSMIQQSQPASSTAMFNA 377

Query: 240 SGSSQPSLNQ-MLRSVSGPSSSLG 262
             + QP+ N  +LRSVSG +S LG
Sbjct: 378 PSNVQPTTNHPLLRSVSGTNSGLG 401


>Glyma14g24290.1 
          Length = 610

 Score =  190 bits (482), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 138/286 (48%), Positives = 169/286 (59%), Gaps = 28/286 (9%)

Query: 1   VAFLASAVGPRVXXXX--------------XXXXXXXXXEDNRMNSERLHSREGSFHGEV 46
           VAFLASAVGPRV                            DNR NSE +H+R+G   GEV
Sbjct: 329 VAFLASAVGPRVAATCAHAALASLSGNNSGSTAHIEAVENDNRTNSESIHNRDGGHDGEV 388

Query: 47  ANSIQQKE---------GQNEAEGGPVSXXXXXXXXXXXXXXXXXXXXXXXDHEEREIQR 97
           ANS Q+ +         GQ+E     +S                       DHEEREIQR
Sbjct: 389 ANSNQKNKDMSKVLGSCGQHEGGSILLSAEKVKDAAKAGLSAAAMKAKLFADHEEREIQR 448

Query: 98  LSANIINHQLKRLELKLKQFAEVETFLMRECEQVEKTRQRFAAERARMMSTRIGPAGSTS 157
           L ANI+N++LKRLELKLKQFAE+ET LMRECEQVEK RQR A+ER+ ++STR+G  G+T 
Sbjct: 449 LCANIVNNKLKRLELKLKQFAEIETQLMRECEQVEKVRQRLASERSHIISTRLGNGGTTP 508

Query: 158 QMNLAGVGPSMVNNNISSNRQQVMPPSSQPNISGYGNNQQVHPHVSFMQRGQQQPMFPLG 217
            MN+AGVGPS +NNN +  +Q +   SSQP+ISGYGN+Q+VHPH+SF+ R     +F LG
Sbjct: 509 -MNIAGVGPSTINNNSNGRQQMISASSSQPSISGYGNSQRVHPHMSFVPR---PSVFGLG 564

Query: 218 PRLPLAAIQPSSSAPSNVMFNASGSSQPSLNQ-MLRSVSGPSSSLG 262
            RLPL+ IQ   S  SN M N   + QPS N  M R VS  +S LG
Sbjct: 565 QRLPLSMIQQPQSTSSNPMVNGPSNLQPSPNHSMSRPVSRTNSDLG 610


>Glyma13g10120.1 
          Length = 745

 Score =  163 bits (413), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 104/169 (61%), Positives = 128/169 (75%), Gaps = 6/169 (3%)

Query: 89  DHEEREIQRLSANIINHQLKRLELKLKQFAEVETFLMRECEQVEKTRQRFAAERARMMST 148
           DHEEREIQRL ANI+N++LKRLELKLKQFAE+ET LMRECEQVEK +QR A++R+ ++ST
Sbjct: 582 DHEEREIQRLCANIVNNKLKRLELKLKQFAEIETQLMRECEQVEKVKQRLASDRSHIVST 641

Query: 149 RIGPAGSTSQMNLAGVGPSMVNNNISSNRQQVMPPSSQPNISGYGNNQQVHPHVSFMQRG 208
           R+G  G+T  MN+AG GPSMVNNN +  +Q +   SSQP+ISGYGN+Q VHPH+SF+ R 
Sbjct: 642 RLGNGGTTPPMNVAGAGPSMVNNNSNGRQQMISASSSQPSISGYGNSQPVHPHMSFVPRP 701

Query: 209 QQQPMFPLGPRLPLAAIQPSSSAPSNVMFNASGSSQPSLNQMLRSVSGP 257
               MF LG RLPL+ IQ   SA S+ MFN  G+ QP+ N    SVS P
Sbjct: 702 S---MFGLGQRLPLSMIQQQHSASSDPMFNGPGNLQPTPNH---SVSRP 744


>Glyma11g12640.1 
          Length = 1001

 Score = 63.2 bits (152), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 57/92 (61%), Gaps = 4/92 (4%)

Query: 91  EEREIQRLSANIINHQLKRLELKLKQFAEVETFLMRECEQVEKTRQRFAAERARMMSTRI 150
           EE +I++L++ +I  QL +LE KL  F +VE  +MR  E VE++R +   ERA ++++R+
Sbjct: 862 EEDQIRQLTSLLIEKQLHKLETKLAFFNDVENVVMRAREHVERSRHKLYHERALIIASRL 921

Query: 151 GPAGSTSQMNLAGVGPSMVNNNISSNRQQVMP 182
           G   S+S+    GV PS+  N I +N    +P
Sbjct: 922 GIPPSSSR----GVPPSITTNRIPTNIANSLP 949


>Glyma12g04840.1 
          Length = 883

 Score = 61.6 bits (148), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 57/92 (61%), Gaps = 4/92 (4%)

Query: 91  EEREIQRLSANIINHQLKRLELKLKQFAEVETFLMRECEQVEKTRQRFAAERARMMSTRI 150
           EE +I++L++ +I  QL +LE KL  F +VE  +MR  E VE++R +   ERA ++++R+
Sbjct: 745 EEDQIRQLTSLLIEKQLHKLETKLAFFNDVENVVMRAREHVERSRHKLYHERALIIASRL 804

Query: 151 GPAGSTSQMNLAGVGPSMVNNNISSNRQQVMP 182
           G   S+S+    GV PS+  N I +N    +P
Sbjct: 805 GIPPSSSR----GVPPSIPTNRIPTNIANSLP 832