Jatropha Genome Database

JcCA0262011.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0262011.10 + phase: 0 
         (174 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma12g14060.1                                                       285   1e-77
Glyma06g43840.1                                                       281   3e-76

>Glyma12g14060.1 
          Length = 675

 Score =  285 bits (730), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 135/171 (78%), Positives = 159/171 (92%)

Query: 1   MNGPCPVIPSQLTSAILRSSQFQINAFCLRERDLLSRFAAEVSQHQANGESKERAFIMSY 60
           MN P PVIPSQLTS+ +R+S+FQI+ F LRERDLL RFA EVS++Q+ GESKE AFI+SY
Sbjct: 503 MNKPLPVIPSQLTSSYIRNSEFQIDLFHLRERDLLRRFAEEVSEYQSRGESKESAFILSY 562

Query: 61  QLAEDLGRAFSDRLILQTFIEAETTVSAGSLKNVLGLLRSMYALICLEEDSAFLRYGYLS 120
           QLAE+LGRAFS+R IL+TF+EAE+TV AGSLKNVLGLLRS+YA+IC++EDSAFLRYGYLS
Sbjct: 563 QLAEELGRAFSERAILKTFMEAESTVPAGSLKNVLGLLRSLYAVICVDEDSAFLRYGYLS 622

Query: 121 TESAAAVRKEVAKLCSELRPHALALVSSFGIPDAFLSPIAFNWIDANSWSS 171
           TE+A+AVRKEV KLC+ELRPHALALVSSFGIPDAFLSPIA+NW+D+NSWSS
Sbjct: 623 TENASAVRKEVPKLCAELRPHALALVSSFGIPDAFLSPIAYNWVDSNSWSS 673


>Glyma06g43840.1 
          Length = 675

 Score =  281 bits (718), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 132/171 (77%), Positives = 158/171 (92%)

Query: 1   MNGPCPVIPSQLTSAILRSSQFQINAFCLRERDLLSRFAAEVSQHQANGESKERAFIMSY 60
           MN P PVIPSQLTS+ +RSS+FQI+ F LRERDLL RFA EVS++Q+ GESKE AFI+SY
Sbjct: 503 MNKPLPVIPSQLTSSTVRSSEFQIDLFHLRERDLLRRFAEEVSEYQSRGESKESAFILSY 562

Query: 61  QLAEDLGRAFSDRLILQTFIEAETTVSAGSLKNVLGLLRSMYALICLEEDSAFLRYGYLS 120
           QLA DLGRAFS+R IL+TF+EAE+T+ AG+LKNVLGLLRS+YA+IC++ED+AFLRYGYLS
Sbjct: 563 QLAGDLGRAFSERAILKTFMEAESTLPAGTLKNVLGLLRSLYAVICVDEDAAFLRYGYLS 622

Query: 121 TESAAAVRKEVAKLCSELRPHALALVSSFGIPDAFLSPIAFNWIDANSWSS 171
           TE+A+AVRKEV KLC+E+RPHALALVSSFGIPDAFLSPIA+NW+D+NSWSS
Sbjct: 623 TENASAVRKEVPKLCAEIRPHALALVSSFGIPDAFLSPIAYNWVDSNSWSS 673