Jatropha Genome Database
- JcCA0261101.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0261101.10 - phase: 0 /partial
(475 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma20g28910.1 472 e-133
Glyma10g38870.1 466 e-131
Glyma06g10250.1 72 1e-12
Glyma04g10320.1 72 1e-12
Glyma10g03560.1 65 2e-10
Glyma02g16260.1 64 4e-10
>Glyma20g28910.1
Length = 889
Score = 472 bits (1214), Expect = e-133, Method: Compositional matrix adjust.
Identities = 233/389 (59%), Positives = 289/389 (74%), Gaps = 1/389 (0%)
Query: 1 MANLAVPSWASSPEEFIKLHRDALESERVSCQIHHWIDITFGYKMSGQAAVAAKNVMLPS 60
MA+LAVPSWA SPE+FIKLHRDALES RVS Q+HHWIDITFGYKMSGQAA+AAKNVMLP
Sbjct: 501 MADLAVPSWAESPEDFIKLHRDALESNRVSFQLHHWIDITFGYKMSGQAAIAAKNVMLPI 560
Query: 61 SEPTMPRPVGRRQLFTRPHPVRLGSLRKKHSATNTSAANRCLSSTVESETPLLSETAYLQ 120
SEP MPR GRRQLFT+PHP+R + R K +N A ++ + ET LLSETAYLQ
Sbjct: 561 SEPMMPRSTGRRQLFTQPHPIRHATTRTKRHGSNKYAKVWIQANEMHQETSLLSETAYLQ 620
Query: 121 ALEETSGFSEHAGHLSPQYYYDAENLV-KDMFSGDESVNESIEKSVSKPLEIGKNYGLQC 179
LE+ S FSE A HL+ Y+Y K++ S + E+ +S+SK I +NY +
Sbjct: 621 ELEQASTFSEQARHLNAYYHYPLNQTTGKNISSLGDPTTETFSESISKLSLIDRNYQVPY 680
Query: 180 NINLSYLLEHMEVEVENTMGYQELQHWRRQPSYSKNSKEDFSKDIFAIGSVLAELYLKRP 239
+NL L+HM+ E E+++GY +L W+++ S S+ ED ++DIF+IG +LAEL+L RP
Sbjct: 681 RMNLISFLQHMKEEDESSLGYPDLLLWKQKLSSSRLCSEDVARDIFSIGCLLAELHLCRP 740
Query: 240 LFNSTSLATYIERDILPEFFQELPPHAKVLVEACIQKDWRRRPSAKSLLESPYFPTTVKS 299
LF+ SLA Y+E LP F Q+LPP ++LVEACIQKDW RRPSAK LLESPYFP TVKS
Sbjct: 741 LFDPISLAIYLEDGTLPGFLQDLPPDIRLLVEACIQKDWTRRPSAKILLESPYFPKTVKS 800
Query: 300 SYMFIAPLQLIASNGSRLQYAANFAKQGALKAMGSFAAEMCLPYCIPLVVNPQSDTEAEW 359
SY+F+APLQL+A + +RL YAAN AK GAL+ MG+FA EMC YC+PL+VN SDTEAEW
Sbjct: 801 SYLFLAPLQLVAKDETRLHYAANLAKHGALREMGAFATEMCTTYCLPLIVNAVSDTEAEW 860
Query: 360 AYTLLKEFIKCLTPKAVKMAVLPAIQKIL 388
AY LLKEF+KCLT +A+K +LP IQKIL
Sbjct: 861 AYMLLKEFMKCLTVQAMKTLILPTIQKIL 889
>Glyma10g38870.1
Length = 900
Score = 466 bits (1198), Expect = e-131, Method: Compositional matrix adjust.
Identities = 230/391 (58%), Positives = 288/391 (73%), Gaps = 1/391 (0%)
Query: 1 MANLAVPSWASSPEEFIKLHRDALESERVSCQIHHWIDITFGYKMSGQAAVAAKNVMLPS 60
MA+LAVPSWA S E+FIKLHRDALES RVS Q+HHWIDITFGYK+SGQAA+AAKNVMLP
Sbjct: 500 MADLAVPSWAESHEDFIKLHRDALESNRVSFQLHHWIDITFGYKISGQAAIAAKNVMLPI 559
Query: 61 SEPTMPRPVGRRQLFTRPHPVRLGSLRKKHSATNTSAANRCLSSTVESETPLLSETAYLQ 120
SEP MPR GRRQLFT+PHP+R + K +N A ++ ET LLSETAYLQ
Sbjct: 560 SEPMMPRSTGRRQLFTQPHPIRHATTSTKRHGSNKYAKVWSQANATHRETSLLSETAYLQ 619
Query: 121 ALEETSGFSEHAGHLSPQYYYD-AENLVKDMFSGDESVNESIEKSVSKPLEIGKNYGLQC 179
LE+ S FSEHA HL+ Y+Y + K++ S + E+ +S+SK I +NY +
Sbjct: 620 ELEQASTFSEHARHLNAFYHYPLNQTRGKNISSSGDPTTETFSESISKLSLIDRNYQVPY 679
Query: 180 NINLSYLLEHMEVEVENTMGYQELQHWRRQPSYSKNSKEDFSKDIFAIGSVLAELYLKRP 239
+NL L+HM+ E + + GY +L W+++ S S+ ED ++DIF++G +LAEL+L RP
Sbjct: 680 KMNLISFLQHMKEEDKGSSGYPDLLLWKQKLSSSRLCSEDIARDIFSVGCLLAELHLCRP 739
Query: 240 LFNSTSLATYIERDILPEFFQELPPHAKVLVEACIQKDWRRRPSAKSLLESPYFPTTVKS 299
LF+ SLA Y+E LP + Q+LPP ++LVEACIQKDW RRPSAK LLESPYFP TVKS
Sbjct: 740 LFDPISLAIYLEDGTLPGYLQDLPPDIRLLVEACIQKDWMRRPSAKILLESPYFPNTVKS 799
Query: 300 SYMFIAPLQLIASNGSRLQYAANFAKQGALKAMGSFAAEMCLPYCIPLVVNPQSDTEAEW 359
SY+F+APLQL+A + +RL+YAAN AK GAL+ MG+FA EMC YC+PL+V SDTEAEW
Sbjct: 800 SYLFLAPLQLVAKDETRLRYAANLAKHGALREMGTFATEMCTTYCLPLIVTAVSDTEAEW 859
Query: 360 AYTLLKEFIKCLTPKAVKMAVLPAIQKILQA 390
AY LLKEF+KCLT +AVK +LP IQKILQA
Sbjct: 860 AYMLLKEFMKCLTVQAVKTLILPTIQKILQA 890
>Glyma06g10250.1
Length = 1272
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 58/102 (56%), Gaps = 14/102 (13%)
Query: 1 MANLAVPSWA-SSPEEFIKLHRDALESERVSCQIHHWIDITFGYKMSGQAAVAAKNVM-- 57
+ ++ +P WA SPEEFI+ +R+ALESE VS +HHWID+ FGYK G+ AV A N+
Sbjct: 789 IGDVCLPPWAKGSPEEFIRRNREALESEYVSSNLHHWIDLVFGYKQRGKPAVEAANIFYY 848
Query: 58 --------LPSSEPTMPRPVGRRQLFTRPH-PVRLGSLRKKH 90
L ++E + R Q+ P+++ RKKH
Sbjct: 849 LTYEGAVDLETTEDDLQRAAIEDQIANFGQTPIQI--FRKKH 888
>Glyma04g10320.1
Length = 1271
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Query: 1 MANLAVPSWA-SSPEEFIKLHRDALESERVSCQIHHWIDITFGYKMSGQAAVAAKNVM 57
+ ++ +P WA SPEEFI+ +R+ALESE VS +HHWID+ FGYK G+ AV A N+
Sbjct: 788 IGDVCLPPWAKGSPEEFIRRNREALESEYVSSNLHHWIDLVFGYKQRGKPAVEAANIF 845
>Glyma10g03560.1
Length = 3506
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 54/103 (52%), Gaps = 21/103 (20%)
Query: 1 MANLAVPSWA-SSPEEFIKLHRDALESERVSCQIHHWIDITFGYKMSGQAAVAAKNVML- 58
+ ++ +P WA S EFI HR+ALES+ VS +HHWID+ FGYK G+AA + NV
Sbjct: 3046 VGDVVLPLWAKGSAREFISKHREALESDYVSENLHHWIDLIFGYKQRGKAAEESVNVFYH 3105
Query: 59 ----------PSSEPTMPRPV-------GR--RQLFTRPHPVR 82
++P M + G+ +QLF +PH R
Sbjct: 3106 YTYEGSVDIDSVTDPAMKASILAQINHFGQTPKQLFLKPHVKR 3148
>Glyma02g16260.1
Length = 3547
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 53/103 (51%), Gaps = 21/103 (20%)
Query: 1 MANLAVPSWA-SSPEEFIKLHRDALESERVSCQIHHWIDITFGYKMSGQAAVAAKNVML- 58
+ ++ +P WA S EFI HR+ALES VS +HHWID+ FGYK G+AA + NV
Sbjct: 3089 VGDVVLPLWAKGSAREFISKHREALESNYVSENLHHWIDLIFGYKQRGKAAEESVNVFYH 3148
Query: 59 ----------PSSEPTMPRPV-------GR--RQLFTRPHPVR 82
++P M + G+ +QLF +PH R
Sbjct: 3149 YTYEGSVDIDSVTDPAMKASILAQINHFGQTPKQLFLKPHVKR 3191