Jatropha Genome Database

JcCA0259651.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0259651.10 + phase: 2 /pseudo/partial
         (377 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma04g08710.1                                                       298   7e-81
Glyma06g08810.1                                                       289   4e-78

>Glyma04g08710.1 
          Length = 983

 Score =  298 bits (763), Expect = 7e-81,   Method: Compositional matrix adjust.
 Identities = 150/245 (61%), Positives = 183/245 (74%)

Query: 1   LNAKNGELLKHESAAFSGGFSGEXXXXXXXXXXXXXXXXXTLITVNFQNGDINFQKTYIS 60
           LNAKNGELLK++  A      GE                  ++T+N +NG+I++++  IS
Sbjct: 206 LNAKNGELLKNDHKALPCDTFGELLSVSGDKFVVLDKTRSKILTINIKNGEISYKQKPIS 265

Query: 61  DLIEDPLGTVKILPSKLTGMFTLTINSFTIFIRVISEGKLEVVDKINHVTAVSDALSFSE 120
           DLIED  G   ILPS+L  +F L INS  + I+V +EG+L +VDKIN+  AVSDALS  E
Sbjct: 266 DLIEDSSGQAVILPSRLPELFALRINSHVLLIKVTNEGELVLVDKINNAAAVSDALSIPE 325

Query: 121 GQQAFALIEHQDNDIYLIVKLGHDWNNDLLKERIKIDHQRGLVHKVFINNYIRTDRSHGF 180
           GQ AFA ++H+D+ I+L VK  +DWN DLLKER+ IDHQRG V K+FINNY+RTDRS+GF
Sbjct: 326 GQHAFAFVQHEDSKIHLFVKDVNDWNGDLLKERVVIDHQRGNVDKIFINNYVRTDRSYGF 385

Query: 181 RALIVMEDHSLLLLQQGETVWSREDGLASIVDVTISELPVEKKGVSVAKVEQNLFEWLKG 240
           RAL+VMEDHSLLL+QQGE VWSREDGLAS+VDVT SELPVEK+GVSVAKVEQNLFEWLKG
Sbjct: 386 RALMVMEDHSLLLVQQGEIVWSREDGLASVVDVTASELPVEKEGVSVAKVEQNLFEWLKG 445

Query: 241 RNLVL 245
             L L
Sbjct: 446 HVLKL 450


>Glyma06g08810.1 
          Length = 983

 Score =  289 bits (739), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 145/245 (59%), Positives = 181/245 (73%)

Query: 1   LNAKNGELLKHESAAFSGGFSGEXXXXXXXXXXXXXXXXXTLITVNFQNGDINFQKTYIS 60
           LNAKNGELL ++    +    GE                  ++T+N +NG I++++  IS
Sbjct: 206 LNAKNGELLNNDHKTLACDTFGELLSVSGDKFVVLDKTRSKILTLNIKNGGISYKQKPIS 265

Query: 61  DLIEDPLGTVKILPSKLTGMFTLTINSFTIFIRVISEGKLEVVDKINHVTAVSDALSFSE 120
           DLI+D  G   ILP +L  +F L INS  + I+V +EG+L +VDKI++  AVSDALS SE
Sbjct: 266 DLIKDSSGQAVILPLRLPELFALRINSLVLLIKVTNEGELVLVDKIDNAAAVSDALSISE 325

Query: 121 GQQAFALIEHQDNDIYLIVKLGHDWNNDLLKERIKIDHQRGLVHKVFINNYIRTDRSHGF 180
           GQ AFA ++H+D+ I+L VK  +DWN DLLKER+ IDHQRG + K+FINNY+RTDRS+GF
Sbjct: 326 GQHAFAFVQHEDSKIHLFVKDVNDWNGDLLKERVVIDHQRGNIDKIFINNYVRTDRSYGF 385

Query: 181 RALIVMEDHSLLLLQQGETVWSREDGLASIVDVTISELPVEKKGVSVAKVEQNLFEWLKG 240
           RAL+VMEDHSLLL+QQGE VWSREDGLAS+VDVT SELPVEK+GVSVAKVEQNLFEWLKG
Sbjct: 386 RALMVMEDHSLLLVQQGEIVWSREDGLASVVDVTTSELPVEKEGVSVAKVEQNLFEWLKG 445

Query: 241 RNLVL 245
             L L
Sbjct: 446 HVLKL 450