Jatropha Genome Database

JcCA0255541.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0255541.10 + phase: 0 
         (90 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g44250.1                                                       110   5e-25
Glyma13g44250.2                                                       110   5e-25
Glyma15g01020.1                                                       109   8e-25
Glyma07g03410.1                                                       105   1e-23
Glyma08g22690.1                                                       101   1e-22
Glyma20g03500.1                                                        81   3e-16
Glyma16g34840.1                                                        54   5e-08
Glyma05g37970.1                                                        49   8e-07
Glyma08g01620.1                                                        49   1e-06
Glyma05g37350.1                                                        49   1e-06
Glyma08g02200.1                                                        48   2e-06
Glyma11g02320.1                                                        47   4e-06
Glyma01g42720.1                                                        47   6e-06

>Glyma13g44250.1 
          Length = 220

 Score =  110 bits (274), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 51/69 (73%), Positives = 61/69 (88%)

Query: 7  VDSGFIYQDEKLLTVLKTSLFFANDGFTVYDCKGELVFRVDSYGPDTRDTGEVVLMDAHG 66
          V+ G++ ++E  LTVLKTSLFFA DGF+VYDCKG+LVFRVDSYGPDTRD  E+VLMD +G
Sbjct: 15 VEDGYVLKEEIHLTVLKTSLFFAGDGFSVYDCKGQLVFRVDSYGPDTRDIDELVLMDPNG 74

Query: 67 RCLLTVRKK 75
          RCLLTVR+K
Sbjct: 75 RCLLTVRRK 83


>Glyma13g44250.2 
          Length = 219

 Score =  110 bits (274), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 51/69 (73%), Positives = 61/69 (88%)

Query: 7  VDSGFIYQDEKLLTVLKTSLFFANDGFTVYDCKGELVFRVDSYGPDTRDTGEVVLMDAHG 66
          V+ G++ ++E  LTVLKTSLFFA DGF+VYDCKG+LVFRVDSYGPDTRD  E+VLMD +G
Sbjct: 15 VEDGYVLKEEIHLTVLKTSLFFAGDGFSVYDCKGQLVFRVDSYGPDTRDIDELVLMDPNG 74

Query: 67 RCLLTVRKK 75
          RCLLTVR+K
Sbjct: 75 RCLLTVRRK 83


>Glyma15g01020.1 
          Length = 219

 Score =  109 bits (272), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 50/68 (73%), Positives = 60/68 (88%)

Query: 8  DSGFIYQDEKLLTVLKTSLFFANDGFTVYDCKGELVFRVDSYGPDTRDTGEVVLMDAHGR 67
          + G+++++E  LTV KTSLFFA DGFTVYDCKG+LVFRVDSYGPDTRD  E+VLMD +GR
Sbjct: 16 EHGYVFKEEIHLTVFKTSLFFAGDGFTVYDCKGQLVFRVDSYGPDTRDRDELVLMDPNGR 75

Query: 68 CLLTVRKK 75
          CLLTVR+K
Sbjct: 76 CLLTVRRK 83


>Glyma07g03410.1 
          Length = 219

 Score =  105 bits (262), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 49/75 (65%), Positives = 59/75 (78%)

Query: 1  MKGGLVVDSGFIYQDEKLLTVLKTSLFFANDGFTVYDCKGELVFRVDSYGPDTRDTGEVV 60
          MK  LVV+ G+++++E   TVLKTSLFF  DGF VYDCKG+LVFR DSYGP  RD  E+V
Sbjct: 1  MKEELVVEEGYLFKEETHFTVLKTSLFFNGDGFAVYDCKGQLVFRFDSYGPRARDKDELV 60

Query: 61 LMDAHGRCLLTVRKK 75
          LMD HGR LLT+R+K
Sbjct: 61 LMDPHGRSLLTLRRK 75


>Glyma08g22690.1 
          Length = 219

 Score =  101 bits (252), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 49/75 (65%), Positives = 58/75 (77%)

Query: 1  MKGGLVVDSGFIYQDEKLLTVLKTSLFFANDGFTVYDCKGELVFRVDSYGPDTRDTGEVV 60
          MK  LVV  G+++++E  LTVLKTSLFF+ DGF VYD KG LVFR DSYGP  RD  E+V
Sbjct: 1  MKEELVVQEGYLFKEETKLTVLKTSLFFSGDGFAVYDSKGNLVFRFDSYGPLARDKDELV 60

Query: 61 LMDAHGRCLLTVRKK 75
          LMD HGR LLT+R+K
Sbjct: 61 LMDPHGRSLLTLRRK 75


>Glyma20g03500.1 
          Length = 146

 Score = 80.9 bits (198), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 36/53 (67%), Positives = 43/53 (81%)

Query: 31 DGFTVYDCKGELVFRVDSYGPDTRDTGEVVLMDAHGRCLLTVRKKVIYISLPF 83
          DGF VYDCKG+L+FR DSYGP  RD  E+VLMD HGR LLT+R+KV ++SL F
Sbjct: 1  DGFDVYDCKGKLIFRFDSYGPPARDKDELVLMDPHGRSLLTLRRKVQFLSLSF 53


>Glyma16g34840.1 
          Length = 208

 Score = 53.5 bits (127), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 30/59 (50%), Positives = 41/59 (69%), Gaps = 3/59 (5%)

Query: 18 LLTVLKTSLFFANDGFTVYDC-KGELVFRVDSYGPDTRDTGEVVLMDAHGRCLLTVRKK 75
          +LTV K SL    +GFTV+D  +G LVFRVD+Y    +D  +++LMDA G  LLT+R+K
Sbjct: 32 VLTVWKKSLLPNCNGFTVFDTQRGNLVFRVDNYVARNKD--QILLMDAAGTPLLTIRRK 88


>Glyma05g37970.1 
          Length = 196

 Score = 49.3 bits (116), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 25/60 (41%), Positives = 40/60 (66%), Gaps = 2/60 (3%)

Query: 20 TVLKTSLFFANDGFTVYDCKGELVFRVDSYGPDTRDTGEVVLMDAHGRCLLTVRKKVIYI 79
          T+   SL F ++G TVYD  G++V+RVD+Y  D +   EV LMD  G+ L T++K+++ +
Sbjct: 26 TLWLKSLVFHSNGCTVYDSNGDIVYRVDNY--DRKGRREVNLMDLRGKVLCTIKKRLLAL 83


>Glyma08g01620.1 
          Length = 149

 Score = 49.3 bits (116), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 25/58 (43%), Positives = 39/58 (67%), Gaps = 2/58 (3%)

Query: 20 TVLKTSLFFANDGFTVYDCKGELVFRVDSYGPDTRDTGEVVLMDAHGRCLLTVRKKVI 77
          T+   SL F ++G TVYD  G++V+RVD+Y  D +   EV LMD  G+ L T++K+++
Sbjct: 27 TLWLKSLVFHSNGCTVYDSNGDIVYRVDNY--DRKGRREVNLMDLRGKVLCTIKKRLL 82


>Glyma05g37350.1 
          Length = 229

 Score = 49.3 bits (116), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 27/56 (48%), Positives = 35/56 (62%), Gaps = 3/56 (5%)

Query: 19 LTVLKTSLFFANDGFTVYDCKGELVFRVDSYGPDTRDTGEVVLMDAHGRCLLTVRK 74
          LTV + SL  +  GFTV D  G LV+RVD+Y        E++LMDA G  LLT+R+
Sbjct: 42 LTVWRKSLVISCKGFTVIDSYGNLVYRVDNY---IMHPNELILMDASGNSLLTMRR 94


>Glyma08g02200.1 
          Length = 224

 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/56 (48%), Positives = 35/56 (62%), Gaps = 3/56 (5%)

Query: 19 LTVLKTSLFFANDGFTVYDCKGELVFRVDSYGPDTRDTGEVVLMDAHGRCLLTVRK 74
          LTV + SL  +  GFTV D  G LV+RVD+Y        EV+LMDA G  +LT+R+
Sbjct: 43 LTVWRKSLVISCKGFTVIDPYGNLVYRVDNY---IVHPNEVILMDASGNSVLTLRR 95


>Glyma11g02320.1 
          Length = 213

 Score = 47.4 bits (111), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 30/65 (46%), Positives = 41/65 (63%), Gaps = 10/65 (15%)

Query: 16 EKL---LTVLKTSLFFANDGFTVYDCKGELVFRVDSY--GPDTRDTGEVVLMDAHGRCLL 70
          EKL   LTV + SL  + +GFTV D  G LV+RVD+Y   P+     EV LMDA G+ +L
Sbjct: 32 EKLYTSLTVWRKSLLMSCNGFTVIDSYGNLVYRVDNYIGRPN-----EVTLMDASGKSIL 86

Query: 71 TVRKK 75
          T+ ++
Sbjct: 87 TMCRR 91


>Glyma01g42720.1 
          Length = 194

 Score = 46.6 bits (109), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 25/58 (43%), Positives = 36/58 (62%), Gaps = 2/58 (3%)

Query: 20 TVLKTSLFFANDGFTVYDCKGELVFRVDSYGPDTRDTGEVVLMDAHGRCLLTVRKKVI 77
          T+   SL   ++G TVYD  G +V+RVD+Y  DT+    V L+D  GR L T+ KK++
Sbjct: 24 TLWMKSLILHSNGCTVYDSNGVIVYRVDNY--DTKGRRHVNLLDLRGRVLCTIHKKLL 79