Jatropha Genome Database

JcCA0254131.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0254131.20 + phase: 0 /partial
         (424 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma07g31550.1                                                       431   e-121
Glyma14g36780.1                                                        50   4e-06

>Glyma07g31550.1 
          Length = 914

 Score =  431 bits (1107), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 229/414 (55%), Positives = 295/414 (71%), Gaps = 19/414 (4%)

Query: 24  FKPLF-SLQNSPDSISPQLSLQSETLKVLEWSSLCDRLSYFTSTSMGNSVARNASIPIGK 82
           FKP F S  NSP+S S    LQ+ETLK LEW S+C +LS FTSTSMG++ A NA +PIG+
Sbjct: 20  FKPRFCSNPNSPESNS----LQAETLKTLEWGSVCKQLSAFTSTSMGSAAALNARLPIGR 75

Query: 83  SLQESRKLLDQTAAALAVMQSGPLDFSEIEDVTGIVDSAVSGNLLTIGEXXXXXXXXXXX 142
           + ++S++LLDQT+AA  V +  PLDFS + D+T I+  A SG+LLTI E           
Sbjct: 76  TRRDSQRLLDQTSAARLVAE--PLDFSGVHDLTEILGVATSGHLLTIRELCTVRHTLAAA 133

Query: 143 XXXXXXXK---DGGDCLERYGPLLEILQRCSFQIELEQKIGFCLDCNLSIILDRASEELE 199
                  K      +  +RY PLL+ILQ C+FQ+ LE+KI FC+DC LSIILDRASE+LE
Sbjct: 134 RELFDALKRVASASNHPQRYLPLLDILQNCNFQVGLERKIEFCIDCKLSIILDRASEDLE 193

Query: 200 IIRSERKRNMENLDTLLKGISTRIFQAGGADRPLVTKRRSRLCVGVRATHRHLIRNGVIL 259
           IIRSERKRN+E LD+LLK +S++IFQAGG DRPL+ KRRSR+CVG+RA+HR+L+ +GV+L
Sbjct: 194 IIRSERKRNIEILDSLLKEVSSQIFQAGGIDRPLIVKRRSRMCVGIRASHRYLLPDGVVL 253

Query: 260 DVSGSGATYFMEPDDAVELNNLEVMLSNSERAEEIVILSLLTSEIAQSEKEIKHLLDGIL 319
           +VS SGATYFMEP DA++LNNLEV LS+SE+AEE VILS+L SEIA SE +I HLLD IL
Sbjct: 254 NVSSSGATYFMEPKDAIDLNNLEVRLSSSEKAEESVILSMLASEIANSESDINHLLDKIL 313

Query: 320 KVDLAFSRAAYAQQMNAICPILTSEGCEGE---------LSGGAHYPLLIDIEGIRHPLL 370
           KVDLAF+RAAYAQ MN +CPI +    EG          L       L +DI GIRHPLL
Sbjct: 314 KVDLAFARAAYAQWMNGVCPIFSLGNFEGRDSVEDDDDTLVTQEDDDLTVDIVGIRHPLL 373

Query: 371 IGSSQRSLSDFLGSNSQNSTELNYGDGVMATERLSETVSEFPVPINIKVECGTK 424
           + SS  ++SD L   S N+ E   G+G MA++ + + +S+FPVP++ K+  GT+
Sbjct: 374 LESSLENISDNLTLRSGNAAEFGNGNGTMASKYMPQGISDFPVPVDFKIGHGTR 427


>Glyma14g36780.1 
          Length = 711

 Score = 50.4 bits (119), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 43/71 (60%)

Query: 36  SISPQLSLQSETLKVLEWSSLCDRLSYFTSTSMGNSVARNASIPIGKSLQESRKLLDQTA 95
           S+S   S+  ++L+VLEW  LCD ++ F  TS+G    ++    + ++ +ES  LL++T 
Sbjct: 11  SLSLSASIHHDSLRVLEWDKLCDLVASFACTSLGRQALKDQLWSLNQTFEESLALLEETN 70

Query: 96  AALAVMQSGPL 106
           AA+ + + G L
Sbjct: 71  AAVEMNKHGSL 81