Jatropha Genome Database

JcCA0252151.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0252151.10 - phase: 1 /partial
         (91 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma10g36190.1                                                       116   5e-27
Glyma20g31430.1                                                       114   2e-26
Glyma05g22150.1                                                       110   3e-25
Glyma16g27090.1                                                       107   2e-24
Glyma02g08070.1                                                       101   2e-22

>Glyma10g36190.1 
          Length = 386

 Score =  116 bits (290), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 55/74 (74%), Positives = 61/74 (82%), Gaps = 3/74 (4%)

Query: 7   GSNRSASLQVVGGDSDCSDLKMGHVSVLVKGWTWIPDNLDNLYSCRCGLTCLWTKSAVLA 66
             ++ ASLQ VG   DC  LK+ HVSVLVKGWTWIPDNLDNLYSC CGL+CLWTKS VLA
Sbjct: 68  NQSKVASLQEVG---DCGGLKLNHVSVLVKGWTWIPDNLDNLYSCSCGLSCLWTKSPVLA 124

Query: 67  DKPDTLLFETTTPP 80
           DKPD LLFE++TPP
Sbjct: 125 DKPDALLFESSTPP 138


>Glyma20g31430.1 
          Length = 403

 Score =  114 bits (286), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 57/77 (74%), Positives = 63/77 (81%), Gaps = 5/77 (6%)

Query: 9   NRSASLQVVGGDSDCSDLKMGHVSVLVKGWTWIPDNLDNLYSCRCGLTCLWTKSAVLADK 68
           ++ ASLQ V   SDC  LK+ HVSVLVKGWTWIPDNLDNLYSC CGL+CLWTKS VLADK
Sbjct: 87  SKVASLQEV---SDCGGLKLNHVSVLVKGWTWIPDNLDNLYSCSCGLSCLWTKSPVLADK 143

Query: 69  PDTLLFETTTPP--RRV 83
           PD L FE++TPP  RRV
Sbjct: 144 PDALFFESSTPPLQRRV 160


>Glyma05g22150.1 
          Length = 105

 Score =  110 bits (275), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 53/73 (72%), Positives = 59/73 (80%), Gaps = 3/73 (4%)

Query: 8   SNRSASLQVVGGDSDCSDLKMGHVSVLVKGWTWIPDNLDNLYSCRCGLTCLWTKSAVLAD 67
            ++  SLQ VG   DC  LK+ HVSVLVKGWTWIPDNLDNLYSC CGL+CLWTKS VLAD
Sbjct: 36  QSKVVSLQEVG---DCGGLKLNHVSVLVKGWTWIPDNLDNLYSCSCGLSCLWTKSLVLAD 92

Query: 68  KPDTLLFETTTPP 80
           KPD LLFE++ PP
Sbjct: 93  KPDALLFESSMPP 105


>Glyma16g27090.1 
          Length = 400

 Score =  107 bits (268), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 54/85 (63%), Positives = 62/85 (72%), Gaps = 3/85 (3%)

Query: 1   IHFGSSGSNR--SASLQ-VVGGDSDCSDLKMGHVSVLVKGWTWIPDNLDNLYSCRCGLTC 57
           I+   +GSN   S SLQ   GG  +C  LKM HVS+LVKGWTWIPDNL+N+Y C CGL+C
Sbjct: 72  INQQRNGSNYGFSTSLQDQFGGQLECGVLKMKHVSILVKGWTWIPDNLNNMYICPCGLSC 131

Query: 58  LWTKSAVLADKPDTLLFETTTPPRR 82
           LWTKS VLAD PD  LFETT PP +
Sbjct: 132 LWTKSLVLADNPDAFLFETTKPPAQ 156


>Glyma02g08070.1 
          Length = 393

 Score =  101 bits (251), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 48/78 (61%), Positives = 58/78 (74%), Gaps = 1/78 (1%)

Query: 5   SSGSNRSASLQVVGGDSDCSDLKMGHVSVLVKGWTWIPDNLDNLYSCRCGLTCLWTKSAV 64
           ++GSN S S  +     +C  LKM HVS+LVKGWTWIPDNL+++Y C CGL+CLWTKS V
Sbjct: 71  NNGSNYSFSTSL-QDQLECGVLKMKHVSILVKGWTWIPDNLNSMYICPCGLSCLWTKSLV 129

Query: 65  LADKPDTLLFETTTPPRR 82
           LAD PD  LFETT PP +
Sbjct: 130 LADNPDAFLFETTKPPAQ 147