Jatropha Genome Database

JcCA0250521.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0250521.10 + phase: 0 
         (119 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g01350.1                                                       241   8e-65
Glyma11g37380.1                                                       239   6e-64
Glyma11g37380.3                                                       238   1e-63
Glyma11g37380.2                                                       119   6e-28
Glyma16g23270.1                                                        88   3e-18

>Glyma18g01350.1 
          Length = 207

 Score =  241 bits (616), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 115/119 (96%), Positives = 117/119 (98%)

Query: 1   MSKVTNEVLERWNFSIETDSEVVEKGVSREKSDKEIMREIQAIMRQIASSITYLPCLDEA 60
           MSK T+EVLERWNFSIETDSEVVEKGVSREKSDKEIMREIQAIMRQIASSITYLPCLDE 
Sbjct: 89  MSKATSEVLERWNFSIETDSEVVEKGVSREKSDKEIMREIQAIMRQIASSITYLPCLDEP 148

Query: 61  CVFDVLAYTDKDVAVPFTWIESDPKLIANPQMVKLHSFDTKIHKVDTLVSYKNDEWDEQ 119
           CVFDVLAYTDKDVAVPFTW+ESDPKLIANPQMVKLHSFDTKIHKVDTLVSYKNDEWDEQ
Sbjct: 149 CVFDVLAYTDKDVAVPFTWVESDPKLIANPQMVKLHSFDTKIHKVDTLVSYKNDEWDEQ 207


>Glyma11g37380.1 
          Length = 207

 Score =  239 bits (609), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 113/119 (94%), Positives = 116/119 (97%)

Query: 1   MSKVTNEVLERWNFSIETDSEVVEKGVSREKSDKEIMREIQAIMRQIASSITYLPCLDEA 60
           MSK T+EVLERWNFSIETD EVVEKGVSREKSDKEIMREIQAIMRQIASSITYLPCLDE 
Sbjct: 89  MSKATSEVLERWNFSIETDCEVVEKGVSREKSDKEIMREIQAIMRQIASSITYLPCLDEP 148

Query: 61  CVFDVLAYTDKDVAVPFTWIESDPKLIANPQMVKLHSFDTKIHKVDTLVSYKNDEWDEQ 119
           C+FDVLAYTDKDVAVPFTW+ESDPKLIANPQMVKLHSFDTKIHKVDTLVSYKNDEWDEQ
Sbjct: 149 CIFDVLAYTDKDVAVPFTWVESDPKLIANPQMVKLHSFDTKIHKVDTLVSYKNDEWDEQ 207


>Glyma11g37380.3 
          Length = 172

 Score =  238 bits (606), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 113/119 (94%), Positives = 116/119 (97%)

Query: 1   MSKVTNEVLERWNFSIETDSEVVEKGVSREKSDKEIMREIQAIMRQIASSITYLPCLDEA 60
           MSK T+EVLERWNFSIETD EVVEKGVSREKSDKEIMREIQAIMRQIASSITYLPCLDE 
Sbjct: 54  MSKATSEVLERWNFSIETDCEVVEKGVSREKSDKEIMREIQAIMRQIASSITYLPCLDEP 113

Query: 61  CVFDVLAYTDKDVAVPFTWIESDPKLIANPQMVKLHSFDTKIHKVDTLVSYKNDEWDEQ 119
           C+FDVLAYTDKDVAVPFTW+ESDPKLIANPQMVKLHSFDTKIHKVDTLVSYKNDEWDEQ
Sbjct: 114 CIFDVLAYTDKDVAVPFTWVESDPKLIANPQMVKLHSFDTKIHKVDTLVSYKNDEWDEQ 172


>Glyma11g37380.2 
          Length = 156

 Score =  119 bits (299), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 59/66 (89%), Positives = 60/66 (90%)

Query: 1   MSKVTNEVLERWNFSIETDSEVVEKGVSREKSDKEIMREIQAIMRQIASSITYLPCLDEA 60
           MSK T+EVLERWNFSIETD EVVEKGVSREKSDKEIMREIQAIMRQIASSITYLPCLDE 
Sbjct: 89  MSKATSEVLERWNFSIETDCEVVEKGVSREKSDKEIMREIQAIMRQIASSITYLPCLDEP 148

Query: 61  CVFDVL 66
           C   VL
Sbjct: 149 CKNHVL 154


>Glyma16g23270.1 
          Length = 166

 Score = 87.8 bits (216), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 44/58 (75%), Positives = 48/58 (82%), Gaps = 4/58 (6%)

Query: 1   MSKVTNEVLERWNFSIETDSEVVEKGVSREKSDKEIMREIQAIMRQIASSITYLPCLD 58
           MSK T+EVLERWNF+IET+SEVVE G     SDK+IMREI AIMR IASSITY PCLD
Sbjct: 77  MSKATSEVLERWNFNIETNSEVVENG----WSDKKIMREILAIMRHIASSITYFPCLD 130