Jatropha Genome Database

JcCA0249491.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0249491.10 - phase: 1 /pseudo/partial
         (435 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g02950.1                                                       509   e-144
Glyma05g36610.1                                                       496   e-140
Glyma18g38040.1                                                       179   4e-45
Glyma17g11900.1                                                       141   1e-33
Glyma16g09870.1                                                        88   2e-17
Glyma04g15440.1                                                        64   3e-10

>Glyma08g02950.1 
          Length = 731

 Score =  509 bits (1311), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 256/419 (61%), Positives = 298/419 (71%), Gaps = 12/419 (2%)

Query: 24  RQLVSVFRALIGVTRSLGGVYMYSNHRGCDGGRLYYDGCSCVVVNGEVVALGSQFSLKXX 83
           R+L    RA IG T++ GGVY+YSNH+GCDG RLYYDGC+ VVVNG+VVA GSQFSLK  
Sbjct: 206 RKLDVRLRAFIGATQTRGGVYIYSNHQGCDGSRLYYDGCASVVVNGDVVAQGSQFSLKDV 265

Query: 84  XXXXXXXXXXXXXXKRGSSSSFLEEPSGKTRIPSLAVPYKLCQTFNLKMPISNPIKMTPC 143
                          RGS SSF E+ S KT++PS+ VP+ LC  FNLK  +S P+K+   
Sbjct: 266 EVVVAQIDLDVVASLRGSLSSFQEQASCKTKVPSVEVPFSLCLPFNLKTHLSLPLKIKYH 325

Query: 144 SPEEEIASGPACWLWDYLRRSEASGFLLPLSGAVNSSAVAAIVGSMCQLVVKEIANGDEQ 203
           +PEEEIA GP CWLWDYLRRS ASGFLLPLSG  +SS+VAAIVG MCQLVVKEIANGDEQ
Sbjct: 326 TPEEEIAFGPGCWLWDYLRRSGASGFLLPLSGGADSSSVAAIVGCMCQLVVKEIANGDEQ 385

Query: 204 VKADAIRIGCYTDEQFPTDSKEFAKRIFYTVFMESENSSEAMKQQAKAMADDIGSRHXXX 263
           VKADAIRIG Y D  +PTDS+EFAKRIFYTVFM SENSSE  + +AK +AD+IGS H   
Sbjct: 386 VKADAIRIGNYKDGLYPTDSREFAKRIFYTVFMGSENSSEMTRSRAKVLADEIGSWHLDV 445

Query: 264 XXXXXXXXXXXXFQTVTGKKPRNKVDGGSDAENRGLKNIQARTRMTLASTLASLLPWVHN 323
                       FQT+TGK+PR KVDGGS+ EN  L+NIQAR RM LA  LASLLPWVH+
Sbjct: 446 SIDVVVSAFLSLFQTLTGKRPRYKVDGGSNVENLSLQNIQARIRMVLAFMLASLLPWVHS 505

Query: 324 KSGXXXXXXXXXXDEQLSGQLTKYGCSSGDINPIGSFNKKDIQAFLRWAATNLGYSSLAK 383
           K G          DE L G LTKY CSS DINPIGS +K+D++AFL+WAA +LGYSSLA 
Sbjct: 506 KPGFYLVLGSSNVDEGLRGYLTKYDCSSADINPIGSISKQDLRAFLQWAAIHLGYSSLAD 565

Query: 384 VEAAS------------QNLDAKEIVMTSEELSVLGKWRKTFRCGPVSMFQNLCHKWGS 430
           +EAA               LD  ++ MT EELSV G+ RK FRCGPVSMFQNLC++WG+
Sbjct: 566 IEAAPPTAELEPIRSNYSQLDEVDMGMTYEELSVYGRLRKIFRCGPVSMFQNLCYRWGA 624


>Glyma05g36610.1 
          Length = 736

 Score =  496 bits (1277), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 252/424 (59%), Positives = 294/424 (69%), Gaps = 17/424 (4%)

Query: 24  RQLVSVFRALIGVTRSLGGVYMYSNHRGCDGGRLYYDGCSCVVVNGEVVALGSQFSLKXX 83
           R+L    RA IG T + GGVY+YSNH+GCDG RLYYDGC+ VVVNG+VVA GSQFSLK  
Sbjct: 206 RKLDVCLRAFIGATHTRGGVYIYSNHQGCDGSRLYYDGCASVVVNGDVVAQGSQFSLKDV 265

Query: 84  XXXXXXXXXXXXXXKRGSSSSFLEEPSGKTRIPSLAVPYKLCQTFNLKMPISNPIKMTPC 143
                          RGS SSF E+ S KT++PS+ VPY LC  FNLK  +S P+K+   
Sbjct: 266 EVVVAQIDLDVVASLRGSLSSFQEQASCKTKVPSVEVPYSLCLPFNLKTRLSLPLKIKYH 325

Query: 144 SPEEEIASGPACWLWDYLRRSEASGFLLPLSGAVNSSAVAAIVGSMCQLVVKEIANGDEQ 203
           +PEEEIA GP CWLWDYLRRS ASGFLLPLSG  +SS+VAAIVG MCQLVVKEIANGDEQ
Sbjct: 326 TPEEEIAFGPGCWLWDYLRRSGASGFLLPLSGGADSSSVAAIVGCMCQLVVKEIANGDEQ 385

Query: 204 VKADAIRIGCYTDEQFPTDSKEFAKRIFYTVFMESE-----NSSEAMKQQAKAMADDIGS 258
           VKADAIRIG Y D Q+PTDS+EFAKRIFYTV +         +SE  + +AK +AD+IGS
Sbjct: 386 VKADAIRIGNYKDGQYPTDSREFAKRIFYTVLVFYTIQMYLPNSEMTRSRAKVLADEIGS 445

Query: 259 RHXXXXXXXXXXXXXXXFQTVTGKKPRNKVDGGSDAENRGLKNIQARTRMTLASTLASLL 318
            H               FQT+TGK+PR KVDGGS+ EN  L+NIQAR RM LA  LASLL
Sbjct: 446 WHLDVSIDVVVSAFLSLFQTLTGKRPRYKVDGGSNVENLSLQNIQARIRMVLAFMLASLL 505

Query: 319 PWVHNKSGXXXXXXXXXXDEQLSGQLTKYGCSSGDINPIGSFNKKDIQAFLRWAATNLGY 378
           PWVH+K G          DE L G LTKY CSS DINPIGS +K+D++AFLRWAA +LGY
Sbjct: 506 PWVHSKPGFYLVLGSSNVDEGLRGYLTKYDCSSADINPIGSISKQDLRAFLRWAAIHLGY 565

Query: 379 SSLAKVEAAS------------QNLDAKEIVMTSEELSVLGKWRKTFRCGPVSMFQNLCH 426
           SSLA +EAA               LD  ++ MT EELS+ G+ RK FRCGPVSMFQNLC+
Sbjct: 566 SSLADIEAAPPTAELEPIRSNYSQLDEVDMGMTYEELSIYGRLRKIFRCGPVSMFQNLCY 625

Query: 427 KWGS 430
           +WG+
Sbjct: 626 RWGA 629


>Glyma18g38040.1 
          Length = 284

 Score =  179 bits (455), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 97/201 (48%), Positives = 121/201 (60%), Gaps = 14/201 (6%)

Query: 196 EIANGDEQVKADAIRIGCYTDEQFPTDSKEFAKRIFYTVFMESENSSEAMKQQAKAMADD 255
           EI NGDEQVKADAIRIG Y D  +P D++EFAKRIFYT+FM S+NSS+  + +AK +A++
Sbjct: 1   EIKNGDEQVKADAIRIGNYKDGLYPIDNREFAKRIFYTMFMGSKNSSKMTRSRAKVLANE 60

Query: 256 IGSRHXXXXXXXXXXXXXXXFQTVTGKKPRNKVDGGSDAENRGLKNIQARTRMTLASTLA 315
           IGS H               FQT+TGK+P  K               Q  + M LA  LA
Sbjct: 61  IGSWHLDVSIDVVVSAFLSLFQTLTGKRPWYKP--------------QIISLMVLAFLLA 106

Query: 316 SLLPWVHNKSGXXXXXXXXXXDEQLSGQLTKYGCSSGDINPIGSFNKKDIQAFLRWAATN 375
           SLLPWVHNK G          DE L   LTKY   S DINPIGS +K+D++AFL+W   +
Sbjct: 107 SLLPWVHNKLGFYLVLGSSNVDEGLHCYLTKYDFISIDINPIGSMSKQDLRAFLQWTTIH 166

Query: 376 LGYSSLAKVEAASQNLDAKEI 396
           LGYSSLA +E A   ++ + I
Sbjct: 167 LGYSSLADIEVAPPTVEPEPI 187


>Glyma17g11900.1 
          Length = 133

 Score =  141 bits (356), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 76/146 (52%), Positives = 91/146 (62%), Gaps = 17/146 (11%)

Query: 196 EIANGDEQVKADAIRIGCYTDEQFPTDSKEFAKRIFYTVFMESENS---SEAMKQQAKAM 252
           EIANGDE VKA AIRIG Y D Q+PTD++EFAKRIFYTVFM SEN    SE  + +AK +
Sbjct: 1   EIANGDEHVKASAIRIGNYKDGQYPTDNREFAKRIFYTVFMGSENRQVLSEMTRSRAKVL 60

Query: 253 ADDIGSRHXXXXXXXXXXXXXXXFQTVTGKKPRNKVDGGSDAENRGLKNIQARTRMTLAS 312
            D+IGS +                 +V   +PR K+DGGS+ EN  L+NI+AR RM LA 
Sbjct: 61  VDEIGSWNLDV--------------SVDVVRPRYKIDGGSNVENLSLQNIEARIRMVLAF 106

Query: 313 TLASLLPWVHNKSGXXXXXXXXXXDE 338
            LASLLPWVH+K G          DE
Sbjct: 107 MLASLLPWVHSKPGVYLVLGSSYVDE 132


>Glyma16g09870.1 
          Length = 204

 Score = 88.2 bits (217), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 42/71 (59%), Positives = 48/71 (67%)

Query: 276 FQTVTGKKPRNKVDGGSDAENRGLKNIQARTRMTLASTLASLLPWVHNKSGXXXXXXXXX 335
           FQT+TGK+PR KVDGGS+ EN  L+NI+AR RM LA  L SLLPWVH+K G         
Sbjct: 71  FQTLTGKRPRYKVDGGSNVENLSLQNIEARIRMVLAFMLPSLLPWVHSKPGFYLVLGSSN 130

Query: 336 XDEQLSGQLTK 346
            DE L G LTK
Sbjct: 131 VDEGLRGYLTK 141


>Glyma04g15440.1 
          Length = 203

 Score = 64.3 bits (155), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 29/39 (74%), Positives = 32/39 (82%)

Query: 196 EIANGDEQVKADAIRIGCYTDEQFPTDSKEFAKRIFYTV 234
           EI NGD  VKADAIRIG Y D Q+PT++KEFAKRIFY V
Sbjct: 58  EITNGDGHVKADAIRIGNYKDGQYPTENKEFAKRIFYIV 96