Jatropha Genome Database

JcCA0247421.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0247421.10 + phase: 1 /partial
         (65 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma14g00510.1                                                        51   2e-07

>Glyma14g00510.1 
          Length = 450

 Score = 51.2 bits (121), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 21/32 (65%), Positives = 25/32 (78%)

Query: 23  LGLCLFMGMRTIAGYMRLLSRNGPWWFLQDDI 54
           LGL LFM +R  AG +RLLS+NGPWWFL  D+
Sbjct: 412 LGLVLFMALRAAAGAVRLLSKNGPWWFLHRDL 443