Jatropha Genome Database

JcCA0247261.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0247261.10 + phase: 0 /pseudo/partial
         (642 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g01840.1                                                        74   6e-13
Glyma09g39530.1                                                        74   7e-13
Glyma18g46730.1                                                        66   9e-11
Glyma03g01130.1                                                        64   5e-10
Glyma13g19620.1                                                        59   1e-08
Glyma10g05240.1                                                        57   9e-08
Glyma07g07680.1                                                        53   1e-06

>Glyma08g01840.1 
          Length = 185

 Score = 73.9 bits (180), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 34/68 (50%), Positives = 48/68 (70%)

Query: 161 EATEAFINQKLIDGKHLIADGASHQSKNFLDALKILNSNKDLFIKLLQDPNSLLVKHIED 220
           E T+  ++Q+ ++  +   DG   +   FLDAL+IL+SNK+LF+KLLQDPNS LVK I D
Sbjct: 98  EVTKMIVDQRFVNKNYQGKDGTGCEPNQFLDALQILHSNKELFVKLLQDPNSWLVKQIHD 157

Query: 221 LRDSQTKK 228
           L+ SQ K+
Sbjct: 158 LQSSQVKE 165


>Glyma09g39530.1 
          Length = 932

 Score = 73.6 bits (179), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 106/439 (24%), Positives = 180/439 (41%), Gaps = 86/439 (19%)

Query: 158 NMNEATEAFINQKLIDGKHLIADGASHQSKNFLDALKILNSNKDLFIKLLQDPNSLLVKH 217
           N+  A   F NQ  ++GK L  DG    S+  ++AL++++S+K LF+KLLQDPNS L+K+
Sbjct: 213 NLANAIHEFANQMRLNGKDLPEDGQFLSSRELMEALQVISSDKQLFLKLLQDPNSHLLKY 272

Query: 218 IEDLRDSQTKKLQNKSFARGG------------------LSECQTRNTRKCNLLM----- 254
           I++L  +Q          RGG                  L E +  + RK          
Sbjct: 273 IQELESAQ---------GRGGKECSSVVSSNCSEQELVNLKETREISNRKHRNFFRKRVK 323

Query: 255 --------ETGDFQPLEKIVVFRPSSKSLQNHADRTSNDSPQIHYSLRS--VHQSVKP-I 303
                   E G  +   +IV+ +P+   +Q      S     +  SL S  + Q   P +
Sbjct: 324 SQPKDSTNENGKTEFSNRIVILKPALTGMQ-----ISESGNNLASSLDSHDIAQYRNPSV 378

Query: 304 R----FPFKQMKRTLMHAIGVSRKEQQLLTDNLLHDKSVHGFEGGQCSKEAVAGSIKGL- 358
           R    F   ++KR L HA+G  R     L    L  +  +    G+C   A      G+ 
Sbjct: 379 RVGSHFSLTEIKRKLKHAMGKERHGNPELIPRKLPVERQNKVPRGKCKDNA------GMR 432

Query: 359 SPNEASSDFERMTKSSMDVNRKDQRDKLGQFDSVVRDEVXXXXXXXXXXXXXXTIRHPKR 418
           SPN+     E++ +   DV +       G     ++D                +  + + 
Sbjct: 433 SPNKDHFFIEKIARPMFDVVK-------GNKTGTLKDSELNVEHESGIPNQSVSNIYIEA 485

Query: 419 NEHFVNIETEFKNENANLPKKQKVKSYDVISSLLEYDLFP-EVSRRTRKPEVVSQQMRFS 477
            +H   +  +  +E+ N+  +Q  K+   I SL EY+  P E   R  +   V+ Q RFS
Sbjct: 486 RKHLCEM-LDNADESTNISSRQMPKTLGRILSLPEYNFSPLESPGRDLEHHSVTAQARFS 544

Query: 478 SYYSRHTVNEDNWRSQEEKENSCSSPVRQNVEAVCGTQMQKHEMRRKI----SSNPFPDD 533
           S      ++EDN            SP       +   ++ K E +  I    S+N     
Sbjct: 545 SSDKTREISEDNL-----------SPKPATCIGLADQEINKSEKQSNICDESSNNKV--- 590

Query: 534 KEQQSISSLNNDMSHIEKT 552
           +E +++S+L++D+ H++ +
Sbjct: 591 QEIKTVSNLSHDVDHVDTS 609


>Glyma18g46730.1 
          Length = 909

 Score = 66.2 bits (160), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 89/369 (24%), Positives = 146/369 (39%), Gaps = 67/369 (18%)

Query: 158 NMNEATEAFINQKLIDGKHLIADGASHQSKNFLDALKILNSNKDLFIKLLQDPNSLLVKH 217
           N+  A   F NQ  ++GK L  DG    S   ++AL++++S+K LF++LLQDPNS L+K+
Sbjct: 213 NLANAIHEFANQMRLNGKDLPEDGQLLSSHELMEALQVISSDKQLFLRLLQDPNSHLLKY 272

Query: 218 IEDLRDSQTKKLQNKSFARGGLSECQTRNTRKC--------------------NLLMETG 257
           I++L ++Q          RGG  EC +  +  C                    N   +  
Sbjct: 273 IQELENAQ---------GRGG-KECSSVTSSNCSEHELVKLKQTRETANRKHRNFFRKRV 322

Query: 258 DFQPLE------------KIVVFRPSSKSLQ-----NHADRTSNDSPQIHYSLRSVHQSV 300
             QP +            +IV+ +P+   +Q     N+   T N      Y   SV    
Sbjct: 323 KSQPKDSTNENEKTEFSNRIVILKPALTGMQISESGNNLASTLNSHDIAQYKNPSVRVGS 382

Query: 301 KPIRFPFKQMKRTLMHAIGVSRKEQQLLTDNLLHDKSVHGFEGGQCSKEAVAGSIKGL-S 359
               F   ++KR L  A+G  R     L    L  +  +    G+C   A      G+ S
Sbjct: 383 ---HFSLTEIKRKLKCAMGKERHGNPELIPRKLPVERQNKLPRGKCKDNA------GMRS 433

Query: 360 PNEASSDFERMTKSSMDVNRKDQRDKLGQFDSVVRDEVXXXXXXXXXXXXXXTIRHPKRN 419
           PN+     E++T+   +V +       G     ++D                +  + +  
Sbjct: 434 PNKDHFFIEKITRPMFNVVK-------GNKTGTMKDSELNVEHESGIPNQSVSNIYIEAR 486

Query: 420 EHFVNIETEFKNENANLPKKQKVKSYDVISSLLEYDLFPEVSRRTRKPEVVSQQMRFSSY 479
           +H   +  +  +EN N+  +Q  K+   I SL EY+       R  +   V+ Q  FSS 
Sbjct: 487 KHLCEM-LDNADENTNISSRQMPKTLGRILSLPEYNF--SSPGRDLEHHSVTAQATFSSS 543

Query: 480 YSRHTVNED 488
                V+ED
Sbjct: 544 DKTREVSED 552


>Glyma03g01130.1 
          Length = 901

 Score = 63.9 bits (154), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 51/170 (30%), Positives = 86/170 (50%), Gaps = 9/170 (5%)

Query: 158 NMNEATEAFINQKLIDGKHLIADGASHQSKNFLDALKILNSNKDLFIKLLQDPNSLLVKH 217
           N  +A   F++Q +++GK          S   ++ L++++S+K+LF+ LLQ+PNSLL+K 
Sbjct: 216 NARDAICEFVDQMILNGKDPAEARKFLCSHQLMEVLQLISSDKELFLSLLQNPNSLLLKC 275

Query: 218 IEDLRDSQTKKLQNKSFARGGLSECQTRNTRKC---NLLMETGDFQPLEKIVVFRPSSKS 274
           +++ R+SQ      K +  G L   Q R   K      + E  +     +IV+ +P    
Sbjct: 276 VQEFRNSQGT--NEKEYDHGNLE--QNREIEKSQSKTSINENENTNSSSRIVILKPGQIG 331

Query: 275 LQNHADRTSNDSPQ-IHYSLRSVHQSVK-PIRFPFKQMKRTLMHAIGVSR 322
           LQN   R +  S Q  H S++    SV+    F   ++K+ L HA+G  R
Sbjct: 332 LQNFETRNNLASYQDTHDSVKYNGPSVRGSSHFSLAEIKKKLKHAMGKER 381


>Glyma13g19620.1 
          Length = 862

 Score = 59.3 bits (142), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 29/76 (38%), Positives = 44/76 (57%)

Query: 147 HERPNEINLQVNMNEATEAFINQKLIDGKHLIADGASHQSKNFLDALKILNSNKDLFIKL 206
           H  P++    +   +A  +FI QK +D K L        SK+F D L++L+SNKDL +K 
Sbjct: 87  HRYPSQGCADLMTTDAEISFIEQKFMDAKRLATHQDLQSSKDFCDTLEVLDSNKDLLLKY 146

Query: 207 LQDPNSLLVKHIEDLR 222
            + P+SL  KH+ DL+
Sbjct: 147 FKRPDSLFKKHLNDLQ 162


>Glyma10g05240.1 
          Length = 860

 Score = 56.6 bits (135), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 27/63 (42%), Positives = 39/63 (61%)

Query: 160 NEATEAFINQKLIDGKHLIADGASHQSKNFLDALKILNSNKDLFIKLLQDPNSLLVKHIE 219
            +A  +FI QK +D K L        SK+F D L++L+SNKDL +K  + P+SL  KH+ 
Sbjct: 101 TDAEISFIEQKFMDAKRLATHQDLQSSKDFCDTLEVLDSNKDLLLKYFKRPDSLFKKHLN 160

Query: 220 DLR 222
           DL+
Sbjct: 161 DLQ 163


>Glyma07g07680.1 
          Length = 909

 Score = 53.1 bits (126), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 51/199 (25%), Positives = 92/199 (46%), Gaps = 28/199 (14%)

Query: 139 HTNENC-MHHERPNEINLQVNMNE-------ATEA---FINQKLIDGKHLIADGASHQSK 187
           H  + C M H    E+ L    N+       AT+A   F+NQ +++GK          S 
Sbjct: 186 HLKDACSMMHGNDGEVELDAQSNQKQAISEKATDAICEFVNQMILNGKDPAEARKFLCSH 245

Query: 188 NFLDALKILNSNKDLFIKLLQDPNSLLVKHIEDLRDSQTKKLQNKSFARGGLSECQTRNT 247
             ++ L++++S+K+LF+ L+Q+PNSLL+K   ++ + +    ++  F +   S+ +T   
Sbjct: 246 QLMEVLQLISSDKELFLSLIQNPNSLLLKCNREIVNHK----KHNFFGKKTKSQSKTSTN 301

Query: 248 RKCNLLMETGDFQPLEKIVVFRPSSKSLQNHADRTSNDSPQIHYSLRSVHQSVKPIR--- 304
              N  + +       +IV+ +P     QN    T N+      +  SV  +  P R   
Sbjct: 302 ENENTNLSS-------RIVIMKPGQIGFQNF--ETGNNLASSQDTHDSVKYNGSPGRGSS 352

Query: 305 -FPFKQMKRTLMHAIGVSR 322
            F   ++K+ L HA+G  R
Sbjct: 353 HFSLTEIKKKLKHAMGKER 371