Jatropha Genome Database

JcCA0247191.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0247191.10 + phase: 1 /partial
         (136 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma11g10190.1                                                       239   5e-64
Glyma12g02510.2                                                       239   6e-64
Glyma12g02510.1                                                       239   9e-64

>Glyma11g10190.1 
          Length = 513

 Score =  239 bits (611), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 111/118 (94%), Positives = 116/118 (98%)

Query: 19  VKLVWYYNNALGRPNKKKFIARAKSYHGSTLISASLSGLPALHQKFDLPAPFVLHTDCPH 78
           VKLVWYYNNALGRP+KKKFIARAKSYHGSTLI+ASLSGLPALHQKFDLPAPFVLHTDCPH
Sbjct: 177 VKLVWYYNNALGRPDKKKFIARAKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPH 236

Query: 79  YWRYHLPGETEEEFSSRLAKNLEDLILKEGPETIAAFIAEPVMGAGGVIPPPASYFEK 136
           YWRYHLPGETEEEFS+RLA NLE LILKEGPETIAAFIAEPVMGAGGVIPPP++YFEK
Sbjct: 237 YWRYHLPGETEEEFSTRLANNLEQLILKEGPETIAAFIAEPVMGAGGVIPPPSTYFEK 294


>Glyma12g02510.2 
          Length = 490

 Score =  239 bits (610), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 111/118 (94%), Positives = 116/118 (98%)

Query: 19  VKLVWYYNNALGRPNKKKFIARAKSYHGSTLISASLSGLPALHQKFDLPAPFVLHTDCPH 78
           VKLVWYYNNALGRP+KKKFIARAKSYHGSTLI+ASLSGLPALHQKFDLPAPFVLHTDCPH
Sbjct: 120 VKLVWYYNNALGRPDKKKFIARAKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPH 179

Query: 79  YWRYHLPGETEEEFSSRLAKNLEDLILKEGPETIAAFIAEPVMGAGGVIPPPASYFEK 136
           YWRYHLPGETEEEFS+RLAKNLE LILKEGPETIAAFIAEPVMGAGGVI PP++YFEK
Sbjct: 180 YWRYHLPGETEEEFSTRLAKNLEQLILKEGPETIAAFIAEPVMGAGGVIVPPSTYFEK 237


>Glyma12g02510.1 
          Length = 513

 Score =  239 bits (609), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 111/118 (94%), Positives = 116/118 (98%)

Query: 19  VKLVWYYNNALGRPNKKKFIARAKSYHGSTLISASLSGLPALHQKFDLPAPFVLHTDCPH 78
           VKLVWYYNNALGRP+KKKFIARAKSYHGSTLI+ASLSGLPALHQKFDLPAPFVLHTDCPH
Sbjct: 177 VKLVWYYNNALGRPDKKKFIARAKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPH 236

Query: 79  YWRYHLPGETEEEFSSRLAKNLEDLILKEGPETIAAFIAEPVMGAGGVIPPPASYFEK 136
           YWRYHLPGETEEEFS+RLAKNLE LILKEGPETIAAFIAEPVMGAGGVI PP++YFEK
Sbjct: 237 YWRYHLPGETEEEFSTRLAKNLEQLILKEGPETIAAFIAEPVMGAGGVIVPPSTYFEK 294