Jatropha Genome Database

JcCA0245241.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0245241.10 + phase: 0 /partial
         (249 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma10g38370.2                                                       400   e-112
Glyma10g38370.1                                                       400   e-112
Glyma20g29480.2                                                       359   2e-99
Glyma20g29480.1                                                       358   2e-99
Glyma08g36140.1                                                        84   2e-16

>Glyma10g38370.2 
          Length = 296

 Score =  400 bits (1029), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 200/251 (79%), Positives = 219/251 (87%), Gaps = 3/251 (1%)

Query: 1   MAALSCYFQFT--INRSSQKVKSKPFIYCSTQPVQSNIKVVVNGAAKEIGRAAVIAVSKA 58
           MA+LSC    T  +N  +   + K  I CS QP Q+NIKVV+NGA KEIG+AAV+AV+KA
Sbjct: 1   MASLSCQVHSTNLLNSKNANSRRKRLISCSAQPTQNNIKVVINGATKEIGKAAVVAVTKA 60

Query: 59  RGMEVAGAVDTHFVGEDIGKLCDMEEPLEIPIINDLTMVLGSISQSKETGVVIDFTDPST 118
           RGMEVAGAVDT  +GEDIGK+C MEE LEIPIINDLTM+LGSISQSK  GVV+DFTDPS+
Sbjct: 61  RGMEVAGAVDTCHIGEDIGKICGMEELLEIPIINDLTMILGSISQSKAAGVVVDFTDPSS 120

Query: 119 VYDNVKQATAFGMKSIVYVPRIKLDTIAALSALCDKASMGCLVAPTLSIGSILLQQAAIS 178
           VYDNVKQATAFGMKSIVYVPRIKLDT+AALSA C+KASMG LVAPTLSIGSILLQQAAIS
Sbjct: 121 VYDNVKQATAFGMKSIVYVPRIKLDTVAALSAFCEKASMGVLVAPTLSIGSILLQQAAIS 180

Query: 179 ASFHYNNVEIVESRAQAADLPSADAFQIAKNLSNLGQIYNREDSSTDVLARGQVLGEDGV 238
           ASFHY+NVEIVESRA A DLPSADA QIA NLSNLGQIYNRED STDVLARGQVLG DG+
Sbjct: 181 ASFHYSNVEIVESRANANDLPSADANQIANNLSNLGQIYNREDPSTDVLARGQVLG-DGI 239

Query: 239 RVHSLVLPGLP 249
           RVHS+VLPGLP
Sbjct: 240 RVHSMVLPGLP 250


>Glyma10g38370.1 
          Length = 301

 Score =  400 bits (1029), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 200/251 (79%), Positives = 219/251 (87%), Gaps = 3/251 (1%)

Query: 1   MAALSCYFQFT--INRSSQKVKSKPFIYCSTQPVQSNIKVVVNGAAKEIGRAAVIAVSKA 58
           MA+LSC    T  +N  +   + K  I CS QP Q+NIKVV+NGA KEIG+AAV+AV+KA
Sbjct: 1   MASLSCQVHSTNLLNSKNANSRRKRLISCSAQPTQNNIKVVINGATKEIGKAAVVAVTKA 60

Query: 59  RGMEVAGAVDTHFVGEDIGKLCDMEEPLEIPIINDLTMVLGSISQSKETGVVIDFTDPST 118
           RGMEVAGAVDT  +GEDIGK+C MEE LEIPIINDLTM+LGSISQSK  GVV+DFTDPS+
Sbjct: 61  RGMEVAGAVDTCHIGEDIGKICGMEELLEIPIINDLTMILGSISQSKAAGVVVDFTDPSS 120

Query: 119 VYDNVKQATAFGMKSIVYVPRIKLDTIAALSALCDKASMGCLVAPTLSIGSILLQQAAIS 178
           VYDNVKQATAFGMKSIVYVPRIKLDT+AALSA C+KASMG LVAPTLSIGSILLQQAAIS
Sbjct: 121 VYDNVKQATAFGMKSIVYVPRIKLDTVAALSAFCEKASMGVLVAPTLSIGSILLQQAAIS 180

Query: 179 ASFHYNNVEIVESRAQAADLPSADAFQIAKNLSNLGQIYNREDSSTDVLARGQVLGEDGV 238
           ASFHY+NVEIVESRA A DLPSADA QIA NLSNLGQIYNRED STDVLARGQVLG DG+
Sbjct: 181 ASFHYSNVEIVESRANANDLPSADANQIANNLSNLGQIYNREDPSTDVLARGQVLG-DGI 239

Query: 239 RVHSLVLPGLP 249
           RVHS+VLPGLP
Sbjct: 240 RVHSMVLPGLP 250


>Glyma20g29480.2 
          Length = 279

 Score =  359 bits (921), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 185/251 (73%), Positives = 203/251 (80%), Gaps = 25/251 (9%)

Query: 1   MAALSCYFQFT--INRSSQKVKSKPFIYCSTQPVQSNIKVVVNGAAKEIGRAAVIAVSKA 58
           MA+LSC F  T  +N  +   + K FI+CS QP Q+NIKVV+NGA KEIGRAAV+AV+KA
Sbjct: 1   MASLSCQFHSTSLLNSKNVNRRRKRFIFCSAQPTQNNIKVVINGATKEIGRAAVVAVTKA 60

Query: 59  RGMEVAGAVDTHFVGEDIGKLCDMEEPLEIPIINDLTMVLGSISQSKETGVVIDFTDPST 118
           RGMEVAGAVDT  VGEDIGK+C MEEPLEIPIINDLTM+LGSISQ               
Sbjct: 61  RGMEVAGAVDTCHVGEDIGKICGMEEPLEIPIINDLTMILGSISQ--------------- 105

Query: 119 VYDNVKQATAFGMKSIVYVPRIKLDTIAALSALCDKASMGCLVAPTLSIGSILLQQAAIS 178
                  ATAFGMKS+VYVP+IKLDT+AALSA CDKASMG LVAPTLSIGSILLQQAAIS
Sbjct: 106 -------ATAFGMKSVVYVPQIKLDTVAALSAFCDKASMGVLVAPTLSIGSILLQQAAIS 158

Query: 179 ASFHYNNVEIVESRAQAADLPSADAFQIAKNLSNLGQIYNREDSSTDVLARGQVLGEDGV 238
           ASFHY+NVEIVESRA A DLPSADA QIA NLSNLGQIYNRED STDVLARGQVLG DG+
Sbjct: 159 ASFHYSNVEIVESRANANDLPSADANQIANNLSNLGQIYNREDPSTDVLARGQVLG-DGI 217

Query: 239 RVHSLVLPGLP 249
           RVHS+VLPG+P
Sbjct: 218 RVHSMVLPGIP 228


>Glyma20g29480.1 
          Length = 282

 Score =  358 bits (920), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 185/251 (73%), Positives = 203/251 (80%), Gaps = 25/251 (9%)

Query: 1   MAALSCYFQFT--INRSSQKVKSKPFIYCSTQPVQSNIKVVVNGAAKEIGRAAVIAVSKA 58
           MA+LSC F  T  +N  +   + K FI+CS QP Q+NIKVV+NGA KEIGRAAV+AV+KA
Sbjct: 1   MASLSCQFHSTSLLNSKNVNRRRKRFIFCSAQPTQNNIKVVINGATKEIGRAAVVAVTKA 60

Query: 59  RGMEVAGAVDTHFVGEDIGKLCDMEEPLEIPIINDLTMVLGSISQSKETGVVIDFTDPST 118
           RGMEVAGAVDT  VGEDIGK+C MEEPLEIPIINDLTM+LGSISQ               
Sbjct: 61  RGMEVAGAVDTCHVGEDIGKICGMEEPLEIPIINDLTMILGSISQ--------------- 105

Query: 119 VYDNVKQATAFGMKSIVYVPRIKLDTIAALSALCDKASMGCLVAPTLSIGSILLQQAAIS 178
                  ATAFGMKS+VYVP+IKLDT+AALSA CDKASMG LVAPTLSIGSILLQQAAIS
Sbjct: 106 -------ATAFGMKSVVYVPQIKLDTVAALSAFCDKASMGVLVAPTLSIGSILLQQAAIS 158

Query: 179 ASFHYNNVEIVESRAQAADLPSADAFQIAKNLSNLGQIYNREDSSTDVLARGQVLGEDGV 238
           ASFHY+NVEIVESRA A DLPSADA QIA NLSNLGQIYNRED STDVLARGQVLG DG+
Sbjct: 159 ASFHYSNVEIVESRANANDLPSADANQIANNLSNLGQIYNREDPSTDVLARGQVLG-DGI 217

Query: 239 RVHSLVLPGLP 249
           RVHS+VLPG+P
Sbjct: 218 RVHSMVLPGIP 228


>Glyma08g36140.1 
          Length = 134

 Score = 83.6 bits (205), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 47/73 (64%), Positives = 53/73 (72%), Gaps = 3/73 (4%)

Query: 179 ASFHYNNVEIVES-RAQAADLPSADAFQIAKNLSNLGQIYNREDSSTDVLA-RGQVLGED 236
           + FH  N   V+  + +  DLPSADA QIA NLSNLGQIYN ED STD L  RGQVLG D
Sbjct: 12  SRFHDINYRYVKMMKHEQKDLPSADANQIANNLSNLGQIYNGEDPSTDGLKERGQVLG-D 70

Query: 237 GVRVHSLVLPGLP 249
           G+RVHS+VLP LP
Sbjct: 71  GIRVHSMVLPELP 83