Jatropha Genome Database

JcCA0241461.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0241461.10 + phase: 0 /partial
         (275 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g03500.1                                                       359   2e-99
Glyma05g36140.1                                                       356   1e-98
Glyma17g15090.1                                                       173   2e-43
Glyma05g04660.1                                                       170   1e-42
Glyma09g16920.1                                                       161   6e-40
Glyma16g09690.1                                                       157   1e-38
Glyma03g22320.1                                                       151   8e-37

>Glyma08g03500.1 
          Length = 567

 Score =  359 bits (921), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 175/277 (63%), Positives = 206/277 (74%), Gaps = 4/277 (1%)

Query: 3   DQQDATAL----KHPFSDRVPIRSIVNRPDGGTGLCGQRVRIGGWVKTGREQGKGSFAFL 58
           +Q  AT L    K  FSDRVPIRSI++RPDGG+GL G + R+GGWVKTGR+  K +FAFL
Sbjct: 10  NQLAATTLDEVPKANFSDRVPIRSIISRPDGGSGLAGSKARVGGWVKTGRKADKDAFAFL 69

Query: 59  ELNDGSCSANLQVIVEKEVADLSPLVHTGACVSVEGVLKEPPEGTKQKIELRVEKVLHVG 118
           E+NDGSC+ NLQVIVE  + +L  LV TG CV  +G LK PP GTKQKIELR +KVLHVG
Sbjct: 70  EINDGSCAGNLQVIVEAALGELGQLVPTGTCVVFDGHLKLPPSGTKQKIELRADKVLHVG 129

Query: 119 PVDPAKYPIPKTKLTLEFLRDRIHFRPRTNTISAVARIRNALAFATHSFFQEHGFLYVHT 178
           PVDPAKYP+PK +LTLEFLRD +H R RTNTISAVARIRNALA+ATH+FF + GFLYVHT
Sbjct: 130 PVDPAKYPLPKMRLTLEFLRDFVHLRSRTNTISAVARIRNALAYATHTFFNKEGFLYVHT 189

Query: 179 PIITTSDCEGAGEMFQVTTXXXXXXXXXXXXXQNPPPSEAEIEAAKLVVKERGEAVAQLX 238
           PI+TTSDCEGAGEMFQVTT             QNPPPSEA++E A+ VV+E+GE V+QL 
Sbjct: 190 PIVTTSDCEGAGEMFQVTTLLSEAERLEKEFLQNPPPSEADVEVARFVVQEKGEVVSQLK 249

Query: 239 XXXXXXXXXXXXXXXLTTAKENVSRLVERSKLKPGIP 275
                          L  AKE+ +++ ERSKLKPGIP
Sbjct: 250 AAKASKQEIGAAVDQLKKAKESFAKVEERSKLKPGIP 286


>Glyma05g36140.1 
          Length = 567

 Score =  356 bits (914), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 170/265 (64%), Positives = 204/265 (76%)

Query: 11  KHPFSDRVPIRSIVNRPDGGTGLCGQRVRIGGWVKTGREQGKGSFAFLELNDGSCSANLQ 70
           K  FSDRVPIRSI++R DGG+GL G++ R+GGWVKTGR+  K +FAFLE+NDGSC+ NLQ
Sbjct: 22  KANFSDRVPIRSIISRTDGGSGLAGRKARVGGWVKTGRKADKDAFAFLEINDGSCAGNLQ 81

Query: 71  VIVEKEVADLSPLVHTGACVSVEGVLKEPPEGTKQKIELRVEKVLHVGPVDPAKYPIPKT 130
           VIVE  + +L  LV TG CV V+G LK PP GT+QKIELR +KVLHVGPVDPAKYP+PK 
Sbjct: 82  VIVEAALGELGQLVPTGTCVVVDGHLKLPPAGTRQKIELRADKVLHVGPVDPAKYPLPKM 141

Query: 131 KLTLEFLRDRIHFRPRTNTISAVARIRNALAFATHSFFQEHGFLYVHTPIITTSDCEGAG 190
           +LTLEFLRD +H R RTNTISAVARIRNALA+ATH+FF + GFLYVHTPI+TTSDCEGAG
Sbjct: 142 RLTLEFLRDFVHLRSRTNTISAVARIRNALAYATHTFFNKEGFLYVHTPIVTTSDCEGAG 201

Query: 191 EMFQVTTXXXXXXXXXXXXXQNPPPSEAEIEAAKLVVKERGEAVAQLXXXXXXXXXXXXX 250
           EMFQVTT             QNPPPSEA++EAA++VV+E+GE V+QL             
Sbjct: 202 EMFQVTTLLSEAERLEKELLQNPPPSEADVEAARVVVQEKGEVVSQLKAAKASKQEIGAA 261

Query: 251 XXXLTTAKENVSRLVERSKLKPGIP 275
              L  AKE+++++ E SKLKPGIP
Sbjct: 262 VDQLKKAKESLAKVEEWSKLKPGIP 286


>Glyma17g15090.1 
          Length = 550

 Score =  173 bits (439), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 89/172 (51%), Positives = 120/172 (69%), Gaps = 8/172 (4%)

Query: 30  GTGLCGQRVRIGGWVKTGREQGKGSFAFLELNDGSCSANLQVIVEKEVADL----SPLVH 85
           G  + G+ + + GWV+T R Q   S  FLE+NDGSC +N+Q ++  E        S LV 
Sbjct: 87  GADVLGRNLVVQGWVRTLRIQS--SVTFLEINDGSCLSNMQCVLNSEAEGYDQVESGLVT 144

Query: 86  TGACVSVEGVLKEPPEGTKQKIELRVEKVLHVGPVDPAKYPIPKTKLTLEFLRDRIHFRP 145
           TGA V V+GV+ +  +G+KQK+EL+V K++ +G  DP+ +PI K + + EFLR + H R 
Sbjct: 145 TGASVWVQGVVVKS-QGSKQKVELKVNKIVLIGKSDPS-FPIQKKRASREFLRTKAHLRA 202

Query: 146 RTNTISAVARIRNALAFATHSFFQEHGFLYVHTPIITTSDCEGAGEMFQVTT 197
           RTNT  AVAR+RNALA+ATH FFQE+GF++V +PIIT SDCEGAGE F VTT
Sbjct: 203 RTNTFGAVARVRNALAYATHKFFQENGFVWVSSPIITASDCEGAGEQFCVTT 254


>Glyma05g04660.1 
          Length = 551

 Score =  170 bits (431), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 88/172 (51%), Positives = 119/172 (69%), Gaps = 8/172 (4%)

Query: 30  GTGLCGQRVRIGGWVKTGREQGKGSFAFLELNDGSCSANLQVIVEKEVADL----SPLVH 85
           G  + G+ + + GWV+T R Q      FLE+NDGSC +N+Q ++  E        S LV 
Sbjct: 88  GADVFGRNLVVQGWVRTLRIQS--IVTFLEINDGSCLSNMQCVLNSEAEGYDQVESGLVT 145

Query: 86  TGACVSVEGVLKEPPEGTKQKIELRVEKVLHVGPVDPAKYPIPKTKLTLEFLRDRIHFRP 145
           TGA V V+GV+ +  +G+KQK+EL+V K++ +G  DP+ +PI K + + EFLR + H R 
Sbjct: 146 TGASVWVQGVVVKS-QGSKQKVELKVNKIVLIGKSDPS-FPIQKKRASREFLRTKAHLRA 203

Query: 146 RTNTISAVARIRNALAFATHSFFQEHGFLYVHTPIITTSDCEGAGEMFQVTT 197
           RTNT  AVAR+RNALA+ATH FFQE+GF++V +PIIT SDCEGAGE F VTT
Sbjct: 204 RTNTFGAVARVRNALAYATHKFFQENGFVWVSSPIITASDCEGAGEQFCVTT 255


>Glyma09g16920.1 
          Length = 245

 Score =  161 bits (408), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 99/241 (41%), Positives = 129/241 (53%), Gaps = 33/241 (13%)

Query: 1   MEDQQDATAL----KHPFSDRVPIRSIVNRPDGGTGLCGQRVRIGGWVKTGREQGKGSFA 56
           + DQ  A  L    K  FSD +PI+SI++  +GG+GL  ++ R     +T     K +  
Sbjct: 8   LMDQLAAITLDEVPKDNFSDHIPIQSIISHINGGSGLASRKARP---TRTLSRSWKSTTE 64

Query: 57  FLELNDGSCSANLQVIVEKEVADLSPLVHTGACVSVEGVLKEPPEGTKQKIELRVEKVLH 116
                  S S +  V      A+  P  H  +  +                 LR +KVLH
Sbjct: 65  VAPATSKSSSKSGWV----NSANSFPPEHASSLTATSN-------------SLRADKVLH 107

Query: 117 VGPVDPAKYPIPKTKLTLEFLRDRIHFRPRTNTISAVARIRNALAFATHSFFQEHGFLYV 176
           VG +DPAKYP+PK +LTLEFLRD IH   +TNTI AVARIRN+L  ATH+FF + GFLYV
Sbjct: 108 VGSIDPAKYPLPKMRLTLEFLRDFIHLHSKTNTIFAVARIRNSLTCATHTFFNKEGFLYV 167

Query: 177 HTPIITTSDCEGAGEMFQVTTXXXXXXXXXXXXXQNPPPSEAEIEAAKLVVKERGEAVAQ 236
           HTPI++TSDCEG GEMFQ+               Q      ++++AAK   KE G AV Q
Sbjct: 168 HTPIVSTSDCEGVGEMFQI---------GEGVVVQEKGKVMSQLKAAKASKKEIGAAVDQ 218

Query: 237 L 237
           L
Sbjct: 219 L 219


>Glyma16g09690.1 
          Length = 624

 Score =  157 bits (396), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 112/328 (34%), Positives = 144/328 (43%), Gaps = 75/328 (22%)

Query: 14  FSDRVPIRSIVNRPDGGTGLCGQRVRIGGWVK-------------------TGREQGKG- 53
           +S RV ++ +++R +      GQRV +GGWVK                   T RE GKG 
Sbjct: 21  YSGRVQLKELLDRSEAA---VGQRVVVGGWVKSAKEVEKTAPPPSIATTDDTAREGGKGK 77

Query: 54  ------------------------------------------------SFAFLELNDGSC 65
                                                           S A+L L DGSC
Sbjct: 78  DVSCVEILQSRIPLIRSILDVFGGGGYGQRKKRENVTAPNDKVLPPKASTAYLLLTDGSC 137

Query: 66  SANLQVIVEKEVADLSPLVHTGACVSVEGVLKEPPEGTKQKIELRVEKVLHVGPVDPAKY 125
           + +LQV+V+  VA  S LV TG C+ VEG L E  EG K  IEL  EKVLH+G VD  KY
Sbjct: 138 APSLQVVVDSSVATPSRLVPTGTCLLVEGQL-ERAEG-KHAIELIAEKVLHIGTVDFDKY 195

Query: 126 PIPKTKLTLEFLRDRIHFRPRTNTISAVARIRNALAFATHSFFQEHGFLYVHTPIITTSD 185
           P+ K ++ L+ LRD   FRPRT T++ V RIR++L+FATH+FF EH F+ V  PIIT++D
Sbjct: 196 PLSKKRIPLDKLRDYSQFRPRTTTVATVMRIRSSLSFATHTFFNEHAFIDVQVPIITSTD 255

Query: 186 CEGAGEMFQVTTXXXXXXXXXXXXXQNPPPSEAEIEAAKLVVKERGEAVAQLXXXXXXXX 245
            EG   MF+V T                      +E  K   KE+   V  L        
Sbjct: 256 SEGFSNMFRVNTLEQKAEKEKLETVYETEG--VSLEHVKAAAKEKSNIVEHLERTESNRE 313

Query: 246 XXXXXXXXLTTAKENVSRLVERSKLKPG 273
                   L    E  S+L  R K K G
Sbjct: 314 ALAAAVQDLRKTNELASQLEAREKRKLG 341


>Glyma03g22320.1 
          Length = 635

 Score =  151 bits (381), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 78/146 (53%), Positives = 100/146 (68%), Gaps = 2/146 (1%)

Query: 52  KGSFAFLELNDGSCSANLQVIVEKEVADLSPLVHTGACVSVEGVLKEPPEGTKQKIELRV 111
           K S A+L L DGSC  +LQV+V+  VA  S L+ TG C+ VEG L E  EG K  IEL+ 
Sbjct: 138 KASTAYLLLTDGSCVPSLQVVVDSSVATPSRLLPTGTCLLVEGQL-ERAEG-KHAIELKA 195

Query: 112 EKVLHVGPVDPAKYPIPKTKLTLEFLRDRIHFRPRTNTISAVARIRNALAFATHSFFQEH 171
           EKVLH+G VD  KYP+ K ++ L+ LRD   FRPRT T++ V RIR++L+FATH+FF EH
Sbjct: 196 EKVLHIGTVDFDKYPLSKKRIPLDTLRDYSQFRPRTTTVATVVRIRSSLSFATHTFFNEH 255

Query: 172 GFLYVHTPIITTSDCEGAGEMFQVTT 197
            F+ V  PIIT++D EG   M +V T
Sbjct: 256 AFIDVQVPIITSTDSEGFSNMLKVNT 281