Jatropha Genome Database

JcCA0240711.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0240711.10 - phase: 0 /partial
         (126 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g00810.1                                                       236   4e-63
Glyma02g00810.2                                                       235   6e-63
Glyma10g00920.1                                                       235   7e-63
Glyma13g16440.1                                                       218   1e-57
Glyma10g34150.3                                                        89   1e-18
Glyma10g34150.1                                                        88   2e-18
Glyma10g34150.2                                                        87   5e-18
Glyma10g00920.2                                                        83   5e-17
Glyma03g27160.1                                                        68   3e-12

>Glyma02g00810.1 
          Length = 332

 Score =  236 bits (602), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 112/126 (88%), Positives = 122/126 (96%)

Query: 1   MANAPLRVLVTGAAGQIGYAIVPMIARGVMLGPDQPVILHMLDIEPAAEALNGVKMEMID 60
           MA  P+RVLVTGAAGQIGYA+VPMIARGVMLGPDQPVILHMLDI PAAE+LNGVKME++D
Sbjct: 1   MAKDPVRVLVTGAAGQIGYALVPMIARGVMLGPDQPVILHMLDIPPAAESLNGVKMELVD 60

Query: 61  AAFPLLKGVIATTDVVEACMGVNVAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKH 120
           AAFPLLKGV+ATTDVVEAC GVN+AVMVGGFPRKEGMERKDVM+KNVSIYK+QASALEKH
Sbjct: 61  AAFPLLKGVVATTDVVEACTGVNIAVMVGGFPRKEGMERKDVMTKNVSIYKSQASALEKH 120

Query: 121 AAADCK 126
           AAA+CK
Sbjct: 121 AAANCK 126


>Glyma02g00810.2 
          Length = 307

 Score =  235 bits (600), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 112/126 (88%), Positives = 122/126 (96%)

Query: 1   MANAPLRVLVTGAAGQIGYAIVPMIARGVMLGPDQPVILHMLDIEPAAEALNGVKMEMID 60
           MA  P+RVLVTGAAGQIGYA+VPMIARGVMLGPDQPVILHMLDI PAAE+LNGVKME++D
Sbjct: 1   MAKDPVRVLVTGAAGQIGYALVPMIARGVMLGPDQPVILHMLDIPPAAESLNGVKMELVD 60

Query: 61  AAFPLLKGVIATTDVVEACMGVNVAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKH 120
           AAFPLLKGV+ATTDVVEAC GVN+AVMVGGFPRKEGMERKDVM+KNVSIYK+QASALEKH
Sbjct: 61  AAFPLLKGVVATTDVVEACTGVNIAVMVGGFPRKEGMERKDVMTKNVSIYKSQASALEKH 120

Query: 121 AAADCK 126
           AAA+CK
Sbjct: 121 AAANCK 126


>Glyma10g00920.1 
          Length = 328

 Score =  235 bits (600), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 112/126 (88%), Positives = 122/126 (96%)

Query: 1   MANAPLRVLVTGAAGQIGYAIVPMIARGVMLGPDQPVILHMLDIEPAAEALNGVKMEMID 60
           MA  P+RVLVTGAAGQIGYA+VPMIARGVMLGPDQPVILHMLDI PAAE+LNGVKME++D
Sbjct: 1   MAKDPVRVLVTGAAGQIGYALVPMIARGVMLGPDQPVILHMLDIPPAAESLNGVKMELVD 60

Query: 61  AAFPLLKGVIATTDVVEACMGVNVAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKH 120
           AAFPLLKGV+ATTDVVEAC GVN+AVMVGGFPRKEGMERKDVM+KNVSIYK+QASALEKH
Sbjct: 61  AAFPLLKGVVATTDVVEACTGVNIAVMVGGFPRKEGMERKDVMTKNVSIYKSQASALEKH 120

Query: 121 AAADCK 126
           AAA+CK
Sbjct: 121 AAANCK 126


>Glyma13g16440.1 
          Length = 373

 Score =  218 bits (555), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 101/122 (82%), Positives = 114/122 (93%)

Query: 5   PLRVLVTGAAGQIGYAIVPMIARGVMLGPDQPVILHMLDIEPAAEALNGVKMEMIDAAFP 64
           P+ +LVTGAAGQIGYA+VPMIARG MLGP+QP+ILHMLDIEPA E+L G+KME+IDAA+P
Sbjct: 46  PITILVTGAAGQIGYALVPMIARGAMLGPNQPMILHMLDIEPATESLKGLKMELIDAAYP 105

Query: 65  LLKGVIATTDVVEACMGVNVAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAAD 124
           LL+GV+ATTDVVEAC  VN+ VMVGGFPRKEGMERKDVMSKNVSIYKAQASALE+HAA D
Sbjct: 106 LLRGVVATTDVVEACKDVNIVVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAATD 165

Query: 125 CK 126
           CK
Sbjct: 166 CK 167


>Glyma10g34150.3 
          Length = 402

 Score = 89.0 bits (219), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 48/121 (39%), Positives = 69/121 (57%)

Query: 6   LRVLVTGAAGQIGYAIVPMIARGVMLGPDQPVILHMLDIEPAAEALNGVKMEMIDAAFPL 65
           + + V+GAAG I   ++  +A G + GPDQP+ L +L  E + +AL GV ME+ D+ FPL
Sbjct: 94  INIAVSGAAGMIANHLLFKLASGEVFGPDQPIALKLLGSERSIQALEGVAMELEDSLFPL 153

Query: 66  LKGVIATTDVVEACMGVNVAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAADC 125
           L+ V    D  E       A+++G  PR  GMER D++  N  IY AQ  AL   A+ + 
Sbjct: 154 LREVSIGIDPYEVFQDAEWALLIGAKPRGPGMERADLLDINGQIYAAQGRALNAVASRNV 213

Query: 126 K 126
           K
Sbjct: 214 K 214


>Glyma10g34150.1 
          Length = 436

 Score = 88.2 bits (217), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 48/121 (39%), Positives = 69/121 (57%)

Query: 6   LRVLVTGAAGQIGYAIVPMIARGVMLGPDQPVILHMLDIEPAAEALNGVKMEMIDAAFPL 65
           + + V+GAAG I   ++  +A G + GPDQP+ L +L  E + +AL GV ME+ D+ FPL
Sbjct: 94  INIAVSGAAGMIANHLLFKLASGEVFGPDQPIALKLLGSERSIQALEGVAMELEDSLFPL 153

Query: 66  LKGVIATTDVVEACMGVNVAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAADC 125
           L+ V    D  E       A+++G  PR  GMER D++  N  IY AQ  AL   A+ + 
Sbjct: 154 LREVSIGIDPYEVFQDAEWALLIGAKPRGPGMERADLLDINGQIYAAQGRALNAVASRNV 213

Query: 126 K 126
           K
Sbjct: 214 K 214


>Glyma10g34150.2 
          Length = 423

 Score = 87.0 bits (214), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 48/121 (39%), Positives = 69/121 (57%)

Query: 6   LRVLVTGAAGQIGYAIVPMIARGVMLGPDQPVILHMLDIEPAAEALNGVKMEMIDAAFPL 65
           + + V+GAAG I   ++  +A G + GPDQP+ L +L  E + +AL GV ME+ D+ FPL
Sbjct: 94  INIAVSGAAGMIANHLLFKLASGEVFGPDQPIALKLLGSERSIQALEGVAMELEDSLFPL 153

Query: 66  LKGVIATTDVVEACMGVNVAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAADC 125
           L+ V    D  E       A+++G  PR  GMER D++  N  IY AQ  AL   A+ + 
Sbjct: 154 LREVSIGIDPYEVFQDAEWALLIGAKPRGPGMERADLLDINGQIYAAQGRALNAVASRNV 213

Query: 126 K 126
           K
Sbjct: 214 K 214


>Glyma10g00920.2 
          Length = 242

 Score = 83.2 bits (204), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 37/40 (92%), Positives = 40/40 (100%)

Query: 87  MVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAADCK 126
           MVGGFPRKEGMERKDVM+KNVSIYK+QASALEKHAAA+CK
Sbjct: 1   MVGGFPRKEGMERKDVMTKNVSIYKSQASALEKHAAANCK 40


>Glyma03g27160.1 
          Length = 39

 Score = 67.8 bits (164), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 31/38 (81%), Positives = 35/38 (92%)

Query: 30 MLGPDQPVILHMLDIEPAAEALNGVKMEMIDAAFPLLK 67
          MLG +QPV+LHMLDIEP  EALNGVKME+IDA+FPLLK
Sbjct: 1  MLGLNQPVMLHMLDIEPTTEALNGVKMELIDASFPLLK 38