Jatropha Genome Database

JcCA0237851.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0237851.10 - phase: 0 /pseudo/partial
         (101 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g17340.1                                                       106   6e-24
Glyma11g33260.1                                                        75   1e-14
Glyma18g04960.1                                                        74   3e-14
Glyma10g02460.1                                                        72   2e-13
Glyma02g17330.1                                                        70   4e-13
Glyma18g13630.1                                                        64   4e-11
Glyma08g41960.1                                                        64   5e-11
Glyma18g13640.1                                                        62   1e-10
Glyma02g45330.1                                                        59   9e-10
Glyma08g41970.1                                                        56   7e-09

>Glyma02g17340.1 
          Length = 207

 Score =  106 bits (264), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 49/66 (74%), Positives = 55/66 (83%)

Query: 1  MAVIKVHGNPISTATQRVLATLYEKDLEFEFVHIDLATGEHKREPFISLNPFGQVPALEH 60
          MA I++HGNP STAT R  A+L+EK LEFEFV ID+  GEHK+EPFISLNPFGQVPA E 
Sbjct: 1  MATIRLHGNPFSTATMRAAASLHEKQLEFEFVLIDMKNGEHKKEPFISLNPFGQVPAFED 60

Query: 61 GDLKLF 66
          GDLKLF
Sbjct: 61 GDLKLF 66


>Glyma11g33260.1 
          Length = 213

 Score = 75.1 bits (183), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 35/64 (54%), Positives = 44/64 (68%)

Query: 3  VIKVHGNPISTATQRVLATLYEKDLEFEFVHIDLATGEHKREPFISLNPFGQVPALEHGD 62
          V+KV+G   +   QRVL  L EK +EFE VH+DL  GEHK+  F+   PFGQVPA+E GD
Sbjct: 2  VVKVYGPASAACPQRVLVCLLEKGVEFELVHVDLDLGEHKKPEFLLRQPFGQVPAVEDGD 61

Query: 63 LKLF 66
           +LF
Sbjct: 62 FRLF 65


>Glyma18g04960.1 
          Length = 213

 Score = 73.9 bits (180), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 35/64 (54%), Positives = 43/64 (67%)

Query: 3  VIKVHGNPISTATQRVLATLYEKDLEFEFVHIDLATGEHKREPFISLNPFGQVPALEHGD 62
          V+KV+G   +   QRVL  L EK +EFE VH+DL  GEHK   F+   PFGQVPA+E GD
Sbjct: 2  VVKVYGPASAACPQRVLVCLLEKGVEFELVHVDLDQGEHKTPEFLLRQPFGQVPAVEDGD 61

Query: 63 LKLF 66
           +LF
Sbjct: 62 FRLF 65


>Glyma10g02460.1 
          Length = 218

 Score = 71.6 bits (174), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 32/64 (50%), Positives = 46/64 (71%)

Query: 3  VIKVHGNPISTATQRVLATLYEKDLEFEFVHIDLATGEHKREPFISLNPFGQVPALEHGD 62
          V K++G P+ST T R +  L+EK+++FE V +++   EHK+ PF+S NPFG +P LE GD
Sbjct: 2  VFKLYGLPMSTNTTRAMICLHEKEVDFELVPVNVFAAEHKQPPFLSKNPFGFIPVLEDGD 61

Query: 63 LKLF 66
          L LF
Sbjct: 62 LTLF 65


>Glyma02g17330.1 
          Length = 220

 Score = 70.5 bits (171), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 31/62 (50%), Positives = 45/62 (72%)

Query: 5  KVHGNPISTATQRVLATLYEKDLEFEFVHIDLATGEHKREPFISLNPFGQVPALEHGDLK 64
          K++G P+ST T R +  L+EK+++FE V +++   EHK+ PF+S NPFG +P LE GDL 
Sbjct: 4  KLYGLPMSTNTTRAMICLHEKEVDFELVPVNVFAAEHKQPPFLSKNPFGLIPLLEDGDLT 63

Query: 65 LF 66
          LF
Sbjct: 64 LF 65


>Glyma18g13630.1 
          Length = 215

 Score = 63.9 bits (154), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 31/64 (48%), Positives = 43/64 (67%), Gaps = 1/64 (1%)

Query: 3  VIKVHGNPISTATQRVLATLYEKDLEFEFVHIDLATGEHKREPFISLNPFGQVPALEHGD 62
          ++KV+G P   A +RVL  L EK++EFE VHIDL  GE+K   F+ L PFG +P ++ GD
Sbjct: 2  LVKVYG-PTYGAPKRVLVCLIEKEIEFETVHIDLFKGENKEPEFLKLQPFGSLPVIQDGD 60

Query: 63 LKLF 66
            L+
Sbjct: 61 YTLY 64


>Glyma08g41960.1 
          Length = 215

 Score = 63.5 bits (153), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 30/64 (46%), Positives = 43/64 (67%), Gaps = 1/64 (1%)

Query: 3  VIKVHGNPISTATQRVLATLYEKDLEFEFVHIDLATGEHKREPFISLNPFGQVPALEHGD 62
          V+KV+G P   + +RVL  L EK++EFE VH+DL  GE+K   F+ L PFG +P ++ GD
Sbjct: 2  VVKVYG-PTYGSPKRVLVCLIEKEIEFETVHVDLFKGENKEPEFLKLQPFGSLPVIQDGD 60

Query: 63 LKLF 66
            L+
Sbjct: 61 YTLY 64


>Glyma18g13640.1 
          Length = 190

 Score = 62.0 bits (149), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 30/64 (46%), Positives = 42/64 (65%), Gaps = 1/64 (1%)

Query: 3  VIKVHGNPISTATQRVLATLYEKDLEFEFVHIDLATGEHKREPFISLNPFGQVPALEHGD 62
          V+KV+G P   + +RVL  L EK++EFE VH+DL  GE K   F+ L PFG +P ++ GD
Sbjct: 2  VVKVYG-PTYASPKRVLVCLIEKEIEFETVHVDLFKGEAKEPEFLKLQPFGLLPVIQDGD 60

Query: 63 LKLF 66
            L+
Sbjct: 61 YTLY 64


>Glyma02g45330.1 
          Length = 337

 Score = 59.3 bits (142), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 28/64 (43%), Positives = 42/64 (65%), Gaps = 1/64 (1%)

Query: 3   VIKVHGNPISTATQRVLATLYEKDLEFEFVHIDLATGEHKREPFISLNPFGQVPALEHGD 62
           V+KV+G P   +T+RVL  L EK++EF+ V +D+  GE K   ++ L PFG VP ++ GD
Sbjct: 124 VVKVYG-PHCASTKRVLVCLVEKEVEFDVVPVDVTKGEQKDPEYLKLQPFGVVPVIKDGD 182

Query: 63  LKLF 66
             L+
Sbjct: 183 YTLY 186


>Glyma08g41970.1 
          Length = 216

 Score = 56.2 bits (134), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 41/64 (64%), Gaps = 1/64 (1%)

Query: 3  VIKVHGNPISTATQRVLATLYEKDLEFEFVHIDLATGEHKREPFISLNPFGQVPALEHGD 62
          V+KV+G P     +RV+  L EK++EFE +H+D    EHK+  ++ L PFG +P ++ GD
Sbjct: 2  VVKVYG-PDYANPKRVIVCLIEKEIEFETIHVDSFKEEHKQPEYLKLQPFGLMPVIQDGD 60

Query: 63 LKLF 66
            L+
Sbjct: 61 YTLY 64