Jatropha Genome Database

JcCA0237741.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0237741.10 - phase: 0 /pseudo/partial
         (457 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g00420.1                                                       427   e-119
Glyma11g36760.1                                                       271   9e-73
Glyma18g00670.1                                                       270   2e-72
Glyma03g22740.1                                                       265   9e-71
Glyma16g09230.1                                                       162   7e-40
Glyma16g09260.2                                                       110   4e-24
Glyma16g09260.1                                                       110   4e-24

>Glyma18g00420.1 
          Length = 730

 Score =  427 bits (1097), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 214/302 (70%), Positives = 251/302 (83%), Gaps = 3/302 (0%)

Query: 1   GMIVDSSLTNAIRTHRDLINGRAPYHDKSCSFYNRLSQRLSDASIVLDLFACSLDQVGVA 60
           G++VDS     IRTH  + N +A ++ KS +FYN+LS+RLS AS+VLDLFACSLDQVG A
Sbjct: 272 GIVVDSDRRQPIRTHHHIFNAQATHYAKSSAFYNQLSKRLSGASVVLDLFACSLDQVGAA 331

Query: 61  ELKAPVERSGGFMMLGELFESDQFRKCLRHIFSRGEDGSLKMYFDATIEVITTRDVKICG 120
           EL+ PVE SGGF++L E F+SDQF+ CLR +F   + G L+M FDATIE++TT+DVKICG
Sbjct: 332 ELRGPVEHSGGFIVLSESFDSDQFKNCLRQMFRCDDQGHLRMNFDATIEIVTTKDVKICG 391

Query: 121 ALGPCVSLHKKNDLVSDRETGQGGTYAWKLGTLTNKTCIAFFFEVGDEQKA--HPGSAFF 178
           ALGPCVSL + N LVS+ E G+GGT  WKL TLT+KTCIAFFF+V  EQK    PGSAF 
Sbjct: 392 ALGPCVSLERNNCLVSEAEVGEGGTSVWKLNTLTHKTCIAFFFQVNQEQKMKIQPGSAFL 451

Query: 179 IQFITRYRHGNMGIQKRVTTAARRWVGNKSAEITAGFDQEAAASVMARLAIHRAETCYAR 238
           IQFITRYR GNM I+KRVTTAARRWV + SA+I AGFDQEAAA+VMARLAI RAETC+AR
Sbjct: 452 IQFITRYRQGNM-IRKRVTTAARRWVASHSADIGAGFDQEAAAAVMARLAILRAETCHAR 510

Query: 239 DVIRWLDDNLIRFASKFGDYIQEDPSTFRLSTNFSLYPQFMYYLRRSQFIDVFNSSPDET 298
           DVIRWLDD LIRF SKFGDY+ EDPS+FRLS+NFSLYPQFMY+LRRSQFIDV N++PDET
Sbjct: 511 DVIRWLDDTLIRFTSKFGDYVPEDPSSFRLSSNFSLYPQFMYHLRRSQFIDVSNTTPDET 570

Query: 299 AF 300
           AF
Sbjct: 571 AF 572


>Glyma11g36760.1 
          Length = 767

 Score =  271 bits (694), Expect = 9e-73,   Method: Compositional matrix adjust.
 Identities = 139/306 (45%), Positives = 195/306 (63%), Gaps = 7/306 (2%)

Query: 1   GMIVDSSLTNAIRTHRDLINGRAPYHDKSCSFYNRLSQRLSDASIVLDLFACSLDQVGVA 60
           G IV   L++ +R+H+DL    AP+  K+  FY  L+++L     VLD+FA +LDQVGVA
Sbjct: 303 GAIVSKDLSDPVRSHKDLDKDAAPFFKKAVKFYEGLAKQLVSQGHVLDIFASALDQVGVA 362

Query: 61  ELKAPVERSGGFMMLGELFESDQFRKCLRHIFSRGEDGSLKMYFDATIEVITTRDVKICG 120
           E+K  VER+GG ++L E F    F+   + +F  GE  SL + F+ T+E+  ++++KI G
Sbjct: 363 EIKVAVERTGGLVVLSESFGHSVFKDSFKRVFEDGEQ-SLGLCFNGTLEINCSKEIKIQG 421

Query: 121 ALGPCVSLHKKNDLVSDRETGQGGTYAWKLGTLTNKTCIAFFFEVGDEQKAH-PGS---A 176
            +GPC SL KK   VSD   G+G T AWK+  L   TC+   F++    +++ PG+    
Sbjct: 422 IIGPCTSLEKKGPSVSDTVIGEGNTTAWKMCGLDKSTCLTVMFDLSSSDRSNTPGAINPQ 481

Query: 177 FFIQFITRYRHGNMGIQKRVTTAARRWVGNK--SAEITAGFDQEAAASVMARLAIHRAET 234
            ++QF+T Y+  +     RVTT  RRWV +   S E+  GFDQE AA VMAR A  + E+
Sbjct: 482 LYLQFLTSYQDPSGQSVLRVTTVTRRWVDSSVSSEELVQGFDQETAAVVMARFASLKMES 541

Query: 235 CYARDVIRWLDDNLIRFASKFGDYIQEDPSTFRLSTNFSLYPQFMYYLRRSQFIDVFNSS 294
               D  RWLD  LIR  SKFGDY ++DPS+F L+ +FSL+PQFM+ LRRSQF+ VFN+S
Sbjct: 542 EETFDATRWLDRFLIRLCSKFGDYRKDDPSSFTLNPSFSLFPQFMFNLRRSQFVQVFNNS 601

Query: 295 PDETAF 300
           PDETA+
Sbjct: 602 PDETAY 607


>Glyma18g00670.1 
          Length = 766

 Score =  270 bits (691), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 138/306 (45%), Positives = 195/306 (63%), Gaps = 7/306 (2%)

Query: 1   GMIVDSSLTNAIRTHRDLINGRAPYHDKSCSFYNRLSQRLSDASIVLDLFACSLDQVGVA 60
           G IV   L++ +R+H+DL    AP+  K+  FY  L+++L     VLD+FA +LDQVGVA
Sbjct: 302 GAIVSKDLSDPVRSHKDLDKDAAPFFKKAVKFYEGLAKQLVGQGHVLDIFASALDQVGVA 361

Query: 61  ELKAPVERSGGFMMLGELFESDQFRKCLRHIFSRGEDGSLKMYFDATIEVITTRDVKICG 120
           E+K  VER+GG ++L E F    F+   + +F  GE  SL + F+ T+E+  ++++KI G
Sbjct: 362 EMKVAVERTGGLVVLSESFGHSVFKDSFKRVFEDGEQ-SLGLCFNGTLEINCSKEIKIQG 420

Query: 121 ALGPCVSLHKKNDLVSDRETGQGGTYAWKLGTLTNKTCIAFFFEVGDEQKAH-PGSA--- 176
            +GPC SL KK   V+D   G+G T AWK+  L   TC+   F++    +++ PG+    
Sbjct: 421 IIGPCTSLEKKGPSVADTVIGEGNTTAWKMCGLDKSTCLTVMFDLSSSDRSNTPGAVNPQ 480

Query: 177 FFIQFITRYRHGNMGIQKRVTTAARRWVGNK--SAEITAGFDQEAAASVMARLAIHRAET 234
            ++QF+T Y+  +     RVTT  RRWV +   S E+  GFDQE AA VMAR A  + E+
Sbjct: 481 LYLQFLTSYQDPSGQSVLRVTTVTRRWVDSSVSSEELVQGFDQETAAVVMARFASLKMES 540

Query: 235 CYARDVIRWLDDNLIRFASKFGDYIQEDPSTFRLSTNFSLYPQFMYYLRRSQFIDVFNSS 294
               D  RWLD  LIR  SKFGDY ++DPS+F L+ +FSL+PQFM+ LRRSQF+ VFN+S
Sbjct: 541 EETFDATRWLDRFLIRLCSKFGDYRKDDPSSFTLNPSFSLFPQFMFNLRRSQFVQVFNNS 600

Query: 295 PDETAF 300
           PDETA+
Sbjct: 601 PDETAY 606


>Glyma03g22740.1 
          Length = 767

 Score =  265 bits (677), Expect = 9e-71,   Method: Compositional matrix adjust.
 Identities = 138/305 (45%), Positives = 189/305 (61%), Gaps = 8/305 (2%)

Query: 3   IVDSSLTNAIRTHRDLINGRAPYHDKSCSFYNRLSQRLSDASIVLDLFACSLDQVGVAEL 62
           IV   L+  IR+H+DL     P++ K   FY+ LS++L     VLDLFAC+LDQVG+AEL
Sbjct: 306 IVSKQLSEPIRSHKDLDKDSVPHYHKCVKFYDGLSKQLVHQGHVLDLFACALDQVGIAEL 365

Query: 63  KAPVERSGGFMMLGELFESDQFRKCLRHIFSRGEDGSLKMYFDATIEVITTRDVKICGAL 122
           K  VER+GG ++L E F    F+  L+ IF  G D  L +  +   E+  ++D+K+ G +
Sbjct: 366 KTAVERTGGLVVLAESFGHSVFKDSLKRIFQSG-DYDLGLSSNGIFEINCSKDLKVQGII 424

Query: 123 GPCVSLHKKNDLVSDRETGQGGTYAWKLGTLTNKTCIAFFFEV-----GDEQKAHPGSAF 177
           GPC SL KK  L SD   GQGGT AWK+  L   T +  FF+V      D       + F
Sbjct: 425 GPCASLEKKGPLCSDVTIGQGGTSAWKMCGLDKSTSLCLFFDVVRKETPDATIQSTSNQF 484

Query: 178 FIQFITRYRHGNMGIQKRVTTAARRWVGNKSA--EITAGFDQEAAASVMARLAIHRAETC 235
           + QF+T Y++    ++ RVTT +RRWV    +  ++ AGFDQEAAA VMAR    + ET 
Sbjct: 485 YFQFLTYYQNNGGQMRLRVTTLSRRWVAGPESIQDLIAGFDQEAAAIVMARQVSFKMETE 544

Query: 236 YARDVIRWLDDNLIRFASKFGDYIQEDPSTFRLSTNFSLYPQFMYYLRRSQFIDVFNSSP 295
              D IRWLD  LI   S+FG++ ++ PS+F LS   S++PQFM++LRRSQF+ VFN+SP
Sbjct: 545 AEFDPIRWLDKALINLCSRFGEFQKDTPSSFSLSPRLSIFPQFMFHLRRSQFVQVFNNSP 604

Query: 296 DETAF 300
           DETA+
Sbjct: 605 DETAY 609


>Glyma16g09230.1 
          Length = 516

 Score =  162 bits (410), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 85/212 (40%), Positives = 122/212 (57%), Gaps = 6/212 (2%)

Query: 3   IVDSSLTNAIRTHRDLINGRAPYHDKSCSFYNRLSQRLSDASIVLDLFACSLDQVGVAEL 62
           IV   L+  IR+H+DL     P++     FY+ LS++L     VLDLFAC+LDQVG+AEL
Sbjct: 304 IVSKQLSEPIRSHKDLDKDSVPHYHNCVKFYDGLSKQLVHQGHVLDLFACALDQVGIAEL 363

Query: 63  KAPVERSGGFMMLGELFESDQFRKCLRHIFSRGEDGSLKMYFDATIEVITTRDVKICGAL 122
           K  VER+GG ++L E F    F+  L+ +F  G D  L +  +   E+  ++D+K+ G +
Sbjct: 364 KTAVERTGGLVVLAESFGHSVFKDSLKRVFQSG-DYDLGLSSNGIFEINCSKDLKVQGII 422

Query: 123 GPCVSLHKKNDLVSDRETGQGGTYAWKLGTLTNKTCIAFFFEV-----GDEQKAHPGSAF 177
           GPC SL KK  L SD   GQGGT AWK+  L   T +  FF+V      D       + F
Sbjct: 423 GPCASLEKKGPLCSDVVIGQGGTSAWKMCGLDKSTSLCLFFDVVRKETPDATMQSTSNQF 482

Query: 178 FIQFITRYRHGNMGIQKRVTTAARRWVGNKSA 209
           + QF+T Y++ +  ++ RVTT +RRWV    +
Sbjct: 483 YFQFLTYYQNNSGQMRLRVTTLSRRWVAGPES 514


>Glyma16g09260.2 
          Length = 294

 Score =  110 bits (274), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 54/100 (54%), Positives = 71/100 (71%), Gaps = 2/100 (2%)

Query: 203 WVGN--KSAEITAGFDQEAAASVMARLAIHRAETCYARDVIRWLDDNLIRFASKFGDYIQ 260
           W+ N  K  ++ AGFDQEAAA VMAR    + ET    D IRWLD  LI   S+FG++ +
Sbjct: 75  WLRNFEKDFDLIAGFDQEAAAIVMARQVSFKMETEAEFDPIRWLDKALINLCSRFGEFQK 134

Query: 261 EDPSTFRLSTNFSLYPQFMYYLRRSQFIDVFNSSPDETAF 300
           + PS+F LS   S++PQFM++LRRSQF+ VFN+SPDETA+
Sbjct: 135 DTPSSFSLSPRLSIFPQFMFHLRRSQFVQVFNNSPDETAY 174


>Glyma16g09260.1 
          Length = 332

 Score =  110 bits (274), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 54/100 (54%), Positives = 71/100 (71%), Gaps = 2/100 (2%)

Query: 203 WVGN--KSAEITAGFDQEAAASVMARLAIHRAETCYARDVIRWLDDNLIRFASKFGDYIQ 260
           W+ N  K  ++ AGFDQEAAA VMAR    + ET    D IRWLD  LI   S+FG++ +
Sbjct: 75  WLRNFEKDFDLIAGFDQEAAAIVMARQVSFKMETEAEFDPIRWLDKALINLCSRFGEFQK 134

Query: 261 EDPSTFRLSTNFSLYPQFMYYLRRSQFIDVFNSSPDETAF 300
           + PS+F LS   S++PQFM++LRRSQF+ VFN+SPDETA+
Sbjct: 135 DTPSSFSLSPRLSIFPQFMFHLRRSQFVQVFNNSPDETAY 174