Jatropha Genome Database

JcCA0236591.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0236591.10 + phase: 2 /pseudo/partial
         (422 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma09g03990.1                                                       363   e-100
Glyma15g14980.1                                                       360   2e-99
Glyma09g11600.1                                                       298   6e-81
Glyma15g23400.1                                                       293   2e-79
Glyma20g22160.1                                                       264   2e-70
Glyma10g28170.1                                                       262   7e-70
Glyma19g41210.1                                                       245   6e-65
Glyma03g38620.1                                                       171   1e-42

>Glyma09g03990.1 
          Length = 1115

 Score =  363 bits (931), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 165/183 (90%), Positives = 176/183 (96%)

Query: 240 GDIKLLCDTVVDCVRELTGYDRVMVYKFHEDEHGEVVAENKRSDLEPYIGLHYPATDIPQ 299
           GD+KLLCDTVV+ VRELTGYDRVMVYKFHEDEHGEVV+E+KR DLEPYIGLHYPATDIPQ
Sbjct: 213 GDVKLLCDTVVESVRELTGYDRVMVYKFHEDEHGEVVSESKRPDLEPYIGLHYPATDIPQ 272

Query: 300 ASRFLFKQSRVRMIVDCHATPVRIIQDEALMQPLCLVGSTLRAPHGCHAQYMANMGSIAS 359
           ASRFLFKQ+RVRMIVDCHA+ VR++QDEAL+QPLCLVGSTLRAPHGCHAQYMANMGSIAS
Sbjct: 273 ASRFLFKQNRVRMIVDCHASAVRVVQDEALVQPLCLVGSTLRAPHGCHAQYMANMGSIAS 332

Query: 360 LAMAVIINGNDEEAIGGRNLMRLWGLVVCHHTSARSIPFPLRYACEFLMQAFGLQLNMEL 419
           L MAVIINGNDEE +GGR+ MRLWGLVVCHHTSAR IPFPLRYACEFLMQAFGLQLNMEL
Sbjct: 333 LVMAVIINGNDEEGVGGRSSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMEL 392

Query: 420 QLA 422
           QLA
Sbjct: 393 QLA 395


>Glyma15g14980.1 
          Length = 1141

 Score =  360 bits (923), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 164/183 (89%), Positives = 173/183 (94%)

Query: 240 GDIKLLCDTVVDCVRELTGYDRVMVYKFHEDEHGEVVAENKRSDLEPYIGLHYPATDIPQ 299
           GD+KLLCDTVV+ VRELTGYDRVMVY+FHEDEHGEVVAE KR DLEPYIGLHYPATDIPQ
Sbjct: 233 GDVKLLCDTVVESVRELTGYDRVMVYRFHEDEHGEVVAETKRPDLEPYIGLHYPATDIPQ 292

Query: 300 ASRFLFKQSRVRMIVDCHATPVRIIQDEALMQPLCLVGSTLRAPHGCHAQYMANMGSIAS 359
           ASRFLFKQ+RVRMIVDCHA+ VR++QDEAL+QPLCLVGSTLRAPHGCHAQYMANMGS AS
Sbjct: 293 ASRFLFKQNRVRMIVDCHASAVRVVQDEALVQPLCLVGSTLRAPHGCHAQYMANMGSTAS 352

Query: 360 LAMAVIINGNDEEAIGGRNLMRLWGLVVCHHTSARSIPFPLRYACEFLMQAFGLQLNMEL 419
           L MAVIINGNDEE +GGR  MRLWGLVVCHHTSAR IPFPLRYACEFLMQAFGLQLNMEL
Sbjct: 353 LVMAVIINGNDEEGVGGRTSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMEL 412

Query: 420 QLA 422
           QLA
Sbjct: 413 QLA 415


>Glyma09g11600.1 
          Length = 1099

 Score =  298 bits (764), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 137/182 (75%), Positives = 156/182 (85%), Gaps = 8/182 (4%)

Query: 241 DIKLLCDTVVDCVRELTGYDRVMVYKFHEDEHGEVVAENKRSDLEPYIGLHYPATDIPQA 300
           DI LLCDTVV+ V++LTGYDRVMVYKFHED+HGEVV+E +RSDLEPY+GLHYPATDIPQA
Sbjct: 198 DIGLLCDTVVEEVQKLTGYDRVMVYKFHEDDHGEVVSEIRRSDLEPYLGLHYPATDIPQA 257

Query: 301 SRFLFKQSRVRMIVDCHATPVRIIQDEALMQPLCLVGSTLRAPHGCHAQYMANMGSIASL 360
           SRFLFKQ+RVRMI DCHA PV++IQ E L QPLCLV STLR PHGCH QYMANMGSIASL
Sbjct: 258 SRFLFKQNRVRMICDCHAKPVKVIQSEELRQPLCLVNSTLRLPHGCHTQYMANMGSIASL 317

Query: 361 AMAVIINGNDEEAIGGRNLMRLWGLVVCHHTSARSIPFPLRYACEFLMQAFGLQLNMELQ 420
            MA+++N        G++  RLWGL+VCHHTS R + FP+RYACEFLMQAFGLQL ME+Q
Sbjct: 318 VMAIVVN--------GKHATRLWGLLVCHHTSPRYVSFPVRYACEFLMQAFGLQLYMEIQ 369

Query: 421 LA 422
           LA
Sbjct: 370 LA 371


>Glyma15g23400.1 
          Length = 1108

 Score =  293 bits (751), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 137/183 (74%), Positives = 155/183 (84%), Gaps = 9/183 (4%)

Query: 241 DIKLLCDTVVDCVRELTGYDRVMVYKFHEDEHGEVVAENKRSDLEPYIGLHYPATDIPQA 300
           DI LLCDTVV+ V++LTGYDRVMVYKFHED+HGEVV+E +RSDLEPY+GLHYPATDIPQA
Sbjct: 205 DIGLLCDTVVEEVQKLTGYDRVMVYKFHEDDHGEVVSEIRRSDLEPYLGLHYPATDIPQA 264

Query: 301 SRFLFKQSRVRMIV-DCHATPVRIIQDEALMQPLCLVGSTLRAPHGCHAQYMANMGSIAS 359
           SRFLFKQ+RVRM++ DCHA PV++IQ E L QPLCLV STLR PHGCH QYMANMGSIAS
Sbjct: 265 SRFLFKQNRVRMMICDCHAKPVKVIQSEELRQPLCLVNSTLRLPHGCHTQYMANMGSIAS 324

Query: 360 LAMAVIINGNDEEAIGGRNLMRLWGLVVCHHTSARSIPFPLRYACEFLMQAFGLQLNMEL 419
           L MA+I+NG D          RLWGL+VCHHTS RS+ F +RYACEFLMQ FGLQL ME+
Sbjct: 325 LVMAIIVNGKDA--------TRLWGLLVCHHTSPRSVSFLVRYACEFLMQTFGLQLYMEI 376

Query: 420 QLA 422
           QLA
Sbjct: 377 QLA 379


>Glyma20g22160.1 
          Length = 1123

 Score =  264 bits (674), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 123/186 (66%), Positives = 147/186 (79%), Gaps = 4/186 (2%)

Query: 240 GDIKLLCDTVVDCVRELTGYDRVMVYKFHEDEHGEVVAENKRSDLEPYIGLHYPATDIPQ 299
           G ++ LCDT+V  V ELTGYDRVM YKFHED+HGEV+AE  +  LEPY+GLHYPATDIPQ
Sbjct: 217 GSMERLCDTMVQEVFELTGYDRVMAYKFHEDDHGEVIAEITKPGLEPYLGLHYPATDIPQ 276

Query: 300 ASRFLFKQSRVRMIVDCHATPVRIIQDEALMQPLCLVGSTLRAPHGCHAQYMANMGSIAS 359
           ASRFLF +++VRMIVDCHA  VR++QDE L   L L GSTLRAPH CHAQYMANM SIAS
Sbjct: 277 ASRFLFMKNKVRMIVDCHAKHVRVLQDEKLPFDLTLCGSTLRAPHSCHAQYMANMDSIAS 336

Query: 360 LAMAVIINGNDE----EAIGGRNLMRLWGLVVCHHTSARSIPFPLRYACEFLMQAFGLQL 415
           L MAV++N N+E    +AI  +   RLWGLVVCH+T+ R +PFPLRYACEFL Q F + +
Sbjct: 337 LVMAVVVNDNEEDGDTDAIQPQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHV 396

Query: 416 NMELQL 421
           N E++L
Sbjct: 397 NKEIEL 402


>Glyma10g28170.1 
          Length = 1130

 Score =  262 bits (669), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 120/186 (64%), Positives = 149/186 (80%), Gaps = 4/186 (2%)

Query: 240 GDIKLLCDTVVDCVRELTGYDRVMVYKFHEDEHGEVVAENKRSDLEPYIGLHYPATDIPQ 299
           G+++ LCDT+V  V ELTGYDRVM YKFHED+HGEV+AE  +  LEPY+GLHYPATDIPQ
Sbjct: 216 GNMERLCDTMVQEVFELTGYDRVMAYKFHEDDHGEVIAEITKPGLEPYLGLHYPATDIPQ 275

Query: 300 ASRFLFKQSRVRMIVDCHATPVRIIQDEALMQPLCLVGSTLRAPHGCHAQYMANMGSIAS 359
           ASRFLF++++VRMIVDCHA  VR++QDE L   L L GSTLRAPH CHAQYMANM SIAS
Sbjct: 276 ASRFLFRKNKVRMIVDCHAKHVRVLQDEKLQFDLILCGSTLRAPHSCHAQYMANMDSIAS 335

Query: 360 LAMAVIINGNDE----EAIGGRNLMRLWGLVVCHHTSARSIPFPLRYACEFLMQAFGLQL 415
           L +AV++N N+E    +A+  +   RLWGLVVCH+T+ R +PFPLRYACEFL Q F + +
Sbjct: 336 LVLAVVVNDNEEDGDTDAVQPQKRERLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAVHV 395

Query: 416 NMELQL 421
           + E++L
Sbjct: 396 HKEIEL 401


>Glyma19g41210.1 
          Length = 1130

 Score =  245 bits (626), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 114/187 (60%), Positives = 143/187 (76%), Gaps = 5/187 (2%)

Query: 240 GDIKLLCDTVVDCVRELTGYDRVMVYKFHEDEHGEVVAENKRSDLEPYIGLHYPATDIPQ 299
           G+++ LC+T+V  V ELTGYDRVM YKFHED+HGEV+AE KR  LEPY+GLHYPATDIPQ
Sbjct: 223 GNMETLCNTMVREVFELTGYDRVMAYKFHEDDHGEVIAEVKRPGLEPYLGLHYPATDIPQ 282

Query: 300 ASRFLFKQSRVRMIVDCHATPVRIIQDEALMQPLCLVGSTLRAPHGCHAQYMANMGSIAS 359
           A+RFLF +++VRMIVDC A  V ++QD+ +   L L GSTLRA H CH QYM NM S AS
Sbjct: 283 ATRFLFMKNKVRMIVDCCAKHVNVLQDKKIPFDLTLCGSTLRAAHSCHLQYMENMNSSAS 342

Query: 360 LAMAVIINGNDE-----EAIGGRNLMRLWGLVVCHHTSARSIPFPLRYACEFLMQAFGLQ 414
           L MAV++N NDE     +A+  +   RLWGLVVCHHT+ R +PFPLRYAC+FL Q F + 
Sbjct: 343 LVMAVVVNDNDEDGDSSDAVQPQKSKRLWGLVVCHHTTPRFVPFPLRYACQFLAQVFAVH 402

Query: 415 LNMELQL 421
           ++ EL++
Sbjct: 403 VSKELEI 409


>Glyma03g38620.1 
          Length = 1001

 Score =  171 bits (434), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 85/166 (51%), Positives = 109/166 (65%), Gaps = 21/166 (12%)

Query: 241 DIKLLCDTVVDCVRELTGYDRVMVYKFHEDEHGEVVAENKRSDLEPYIGLHYPATDIPQA 300
           +++ LC+T+V  V ELTGYDRVM YKFH+D+HGEV+AE KR  LEPY+GLHYPATDIP A
Sbjct: 214 NMETLCNTMVQEVFELTGYDRVMAYKFHDDDHGEVIAEVKRPGLEPYLGLHYPATDIPHA 273

Query: 301 SRFLFKQSRVRMIVDCHATPVRIIQDEALMQPLCLVGSTLRAPHGCHAQYMANMGSIASL 360
           +RF   ++R             +IQD+ +   L L GSTLRA H CH Q+M NM S ASL
Sbjct: 274 TRFSLWRTRC------------VIQDKKIPFDLALYGSTLRAAHSCHLQFMVNMNSSASL 321

Query: 361 AMAVIINGNDEEAIGG---------RNLMRLWGLVVCHHTSARSIP 397
            +AV+IN NDE+             ++   LWGLVVCHHT+ + +P
Sbjct: 322 VLAVVINDNDEDGNSSDDAAVQQPHKSSTSLWGLVVCHHTTPKFVP 367