Jatropha Genome Database

JcCA0230221.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0230221.10 - phase: 0 /partial
         (129 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g11020.2                                                       250   3e-67
Glyma17g11020.1                                                       250   3e-67
Glyma03g41610.1                                                       135   8e-33
Glyma19g44210.1                                                       112   7e-26
Glyma12g08170.1                                                        69   9e-13
Glyma11g20420.2                                                        69   1e-12
Glyma11g20420.1                                                        69   1e-12
Glyma09g39680.3                                                        58   2e-09
Glyma09g39680.2                                                        58   2e-09
Glyma09g39680.1                                                        58   3e-09
Glyma17g18550.1                                                        57   4e-09
Glyma18g46510.1                                                        57   4e-09

>Glyma17g11020.2 
          Length = 241

 Score =  250 bits (638), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 117/129 (90%), Positives = 126/129 (97%)

Query: 1   MDFVSPEGLRLDGRRPMEMRQLRAQIGAVAKADGSAVFEMGNTKVIAAVYGPREVQNRSQ 60
           M++VSPEGLRLDGRRPMEMRQ+RA+IGAV+KADGSA+FEMGNTKVIAAVYGPREVQNR+Q
Sbjct: 1   MEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREVQNRNQ 60

Query: 61  QINDQALVRCEYSMANFSTGDRMRKPKGDRRSTEISLVIRQTMEACILTHLMPRSQIDIY 120
           QI+  ALVRCEYSMANFSTGDRMRKPKGDRRSTEISLVIRQTMEACILTHL+PRSQIDIY
Sbjct: 61  QISSHALVRCEYSMANFSTGDRMRKPKGDRRSTEISLVIRQTMEACILTHLLPRSQIDIY 120

Query: 121 VQVLSADGG 129
           VQVL ADGG
Sbjct: 121 VQVLQADGG 129


>Glyma17g11020.1 
          Length = 241

 Score =  250 bits (638), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 117/129 (90%), Positives = 126/129 (97%)

Query: 1   MDFVSPEGLRLDGRRPMEMRQLRAQIGAVAKADGSAVFEMGNTKVIAAVYGPREVQNRSQ 60
           M++VSPEGLRLDGRRPMEMRQ+RA+IGAV+KADGSA+FEMGNTKVIAAVYGPREVQNR+Q
Sbjct: 1   MEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREVQNRNQ 60

Query: 61  QINDQALVRCEYSMANFSTGDRMRKPKGDRRSTEISLVIRQTMEACILTHLMPRSQIDIY 120
           QI+  ALVRCEYSMANFSTGDRMRKPKGDRRSTEISLVIRQTMEACILTHL+PRSQIDIY
Sbjct: 61  QISSHALVRCEYSMANFSTGDRMRKPKGDRRSTEISLVIRQTMEACILTHLLPRSQIDIY 120

Query: 121 VQVLSADGG 129
           VQVL ADGG
Sbjct: 121 VQVLQADGG 129


>Glyma03g41610.1 
          Length = 87

 Score =  135 bits (341), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 65/90 (72%), Positives = 74/90 (82%), Gaps = 12/90 (13%)

Query: 1  MDFVSPEGLRLDGRRPMEMRQLRAQIGAVAKADGSAVFEMGNTKVIAAVYGPREVQNRSQ 60
          M++VSPEGLRLD            +IGAV+KADGS++FEMGNT+V AAVYGPREVQNRSQ
Sbjct: 1  MEYVSPEGLRLD------------EIGAVSKADGSSIFEMGNTEVTAAVYGPREVQNRSQ 48

Query: 61 QINDQALVRCEYSMANFSTGDRMRKPKGDR 90
          QI+  ALVRCEYS+ANFSTGDRMRK KGDR
Sbjct: 49 QISSHALVRCEYSLANFSTGDRMRKSKGDR 78


>Glyma19g44210.1 
          Length = 168

 Score =  112 bits (281), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 53/56 (94%), Positives = 54/56 (96%)

Query: 74  MANFSTGDRMRKPKGDRRSTEISLVIRQTMEACILTHLMPRSQIDIYVQVLSADGG 129
           MANFSTGDRMRK KGDRRSTEISLVIRQTMEACILTHL+PRSQIDIYVQVL ADGG
Sbjct: 1   MANFSTGDRMRKSKGDRRSTEISLVIRQTMEACILTHLLPRSQIDIYVQVLQADGG 56


>Glyma12g08170.1 
          Length = 254

 Score = 69.3 bits (168), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 40/119 (33%), Positives = 63/119 (52%), Gaps = 5/119 (4%)

Query: 10  RLDGRRPMEMRQLRAQIGAVAKADGSAVFEMGNTKVIAAVYGPREVQNRSQQINDQALVR 69
           R DGR   + R    + GAV  A GSA  E+GNTKVI +V+GPRE   ++   +D   + 
Sbjct: 32  RPDGRSFHQCRPAFFRTGAVNAASGSAYAEVGNTKVIVSVFGPRE-SKKAMMYSDIGRLN 90

Query: 70  CEYSMANFSTGDRMRKPKGDRRSTEISLVIRQTMEACILTHLMPRSQIDIYVQVLSADG 128
           C  S   F+T   +R    D +  E S ++ + +E  I+    P++ +D++  VL + G
Sbjct: 91  CNVSFTTFAT--PIRGQGSDHK--EYSSMLHKALEGAIILETFPKTTVDVFALVLESSG 145


>Glyma11g20420.2 
          Length = 185

 Score = 69.3 bits (168), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 41/127 (32%), Positives = 63/127 (49%), Gaps = 10/127 (7%)

Query: 2   DFVSPEGLRLDGRRPMEMRQLRAQIGAVAKADGSAVFEMGNTKVIAAVYGPREVQNRSQQ 61
           D+V P+G      RP   R      GAV  A GSA  E GNTKVI +V+GPRE   ++  
Sbjct: 30  DWVRPDGRGFHQCRPAFFRT-----GAVNAASGSAYAEFGNTKVIVSVFGPRE-SKKAMM 83

Query: 62  INDQALVRCEYSMANFSTGDRMRKPKGDRRSTEISLVIRQTMEACILTHLMPRSQIDIYV 121
            +D   + C  S   F+T   +R    D +  E   ++ + +E  I+    P++ +D++ 
Sbjct: 84  YSDIGRLNCNVSFTTFAT--PIRGQGSDHK--EYCAMLHKALEGAIILETFPKTTVDVFA 139

Query: 122 QVLSADG 128
            VL + G
Sbjct: 140 LVLESSG 146


>Glyma11g20420.1 
          Length = 255

 Score = 68.6 bits (166), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 41/127 (32%), Positives = 63/127 (49%), Gaps = 10/127 (7%)

Query: 2   DFVSPEGLRLDGRRPMEMRQLRAQIGAVAKADGSAVFEMGNTKVIAAVYGPREVQNRSQQ 61
           D+V P+G      RP   R      GAV  A GSA  E GNTKVI +V+GPRE   ++  
Sbjct: 30  DWVRPDGRGFHQCRPAFFRT-----GAVNAASGSAYAEFGNTKVIVSVFGPRE-SKKAMM 83

Query: 62  INDQALVRCEYSMANFSTGDRMRKPKGDRRSTEISLVIRQTMEACILTHLMPRSQIDIYV 121
            +D   + C  S   F+T   +R    D +  E   ++ + +E  I+    P++ +D++ 
Sbjct: 84  YSDIGRLNCNVSFTTFAT--PIRGQGSDHK--EYCAMLHKALEGAIILETFPKTTVDVFA 139

Query: 122 QVLSADG 128
            VL + G
Sbjct: 140 LVLESSG 146


>Glyma09g39680.3 
          Length = 235

 Score = 57.8 bits (138), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 33/123 (26%), Positives = 60/123 (48%), Gaps = 16/123 (13%)

Query: 10  RLDGRRPMEMRQLRAQIGAVAKADGSAVFEMGNTKVIAAVYGPREVQNRSQQINDQALVR 69
           R DGR P ++R L      + +A GSA +  G TKV+AAVYGP+    +++     ++  
Sbjct: 5   RPDGRTPNQLRPLACSCSILHRAHGSASWAQGETKVLAAVYGPKAGTKKNENPEKASI-- 62

Query: 70  CEYSMANFSTGDRMRKPKG---DRRSTEISLVIRQTMEACILTHLMPRSQIDIYVQVLSA 126
                      + + KPK     +   E  +++++T+E+  +  + P +   + VQV+  
Sbjct: 63  -----------EVIWKPKTGQIGKLEKEYEMILKRTLESICIRTIYPNTTTSVIVQVVHD 111

Query: 127 DGG 129
           DG 
Sbjct: 112 DGA 114


>Glyma09g39680.2 
          Length = 243

 Score = 57.8 bits (138), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 33/123 (26%), Positives = 60/123 (48%), Gaps = 16/123 (13%)

Query: 10  RLDGRRPMEMRQLRAQIGAVAKADGSAVFEMGNTKVIAAVYGPREVQNRSQQINDQALVR 69
           R DGR P ++R L      + +A GSA +  G TKV+AAVYGP+    +++     ++  
Sbjct: 5   RPDGRTPNQLRPLACSCSILHRAHGSASWAQGETKVLAAVYGPKAGTKKNENPEKASI-- 62

Query: 70  CEYSMANFSTGDRMRKPKG---DRRSTEISLVIRQTMEACILTHLMPRSQIDIYVQVLSA 126
                      + + KPK     +   E  +++++T+E+  +  + P +   + VQV+  
Sbjct: 63  -----------EVIWKPKTGQIGKLEKEYEMILKRTLESICIRTIYPNTTTSVIVQVVHD 111

Query: 127 DGG 129
           DG 
Sbjct: 112 DGA 114


>Glyma09g39680.1 
          Length = 246

 Score = 57.8 bits (138), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 33/123 (26%), Positives = 60/123 (48%), Gaps = 16/123 (13%)

Query: 10  RLDGRRPMEMRQLRAQIGAVAKADGSAVFEMGNTKVIAAVYGPREVQNRSQQINDQALVR 69
           R DGR P ++R L      + +A GSA +  G TKV+AAVYGP+    +++     ++  
Sbjct: 5   RPDGRTPNQLRPLACSCSILHRAHGSASWAQGETKVLAAVYGPKAGTKKNENPEKASI-- 62

Query: 70  CEYSMANFSTGDRMRKPKG---DRRSTEISLVIRQTMEACILTHLMPRSQIDIYVQVLSA 126
                      + + KPK     +   E  +++++T+E+  +  + P +   + VQV+  
Sbjct: 63  -----------EVIWKPKTGQIGKLEKEYEMILKRTLESICIRTIYPNTTTSVIVQVVHD 111

Query: 127 DGG 129
           DG 
Sbjct: 112 DGA 114


>Glyma17g18550.1 
          Length = 196

 Score = 57.4 bits (137), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 33/123 (26%), Positives = 60/123 (48%), Gaps = 16/123 (13%)

Query: 10  RLDGRRPMEMRQLRAQIGAVAKADGSAVFEMGNTKVIAAVYGPREVQNRSQQINDQALVR 69
           R DGR P ++R L      + +A GSA +  G TKV+AAVYGP+    +++     ++  
Sbjct: 5   RPDGRTPNQLRPLAYSCSILHRAHGSASWAQGETKVLAAVYGPKAGTKKNENPEKASI-- 62

Query: 70  CEYSMANFSTGDRMRKPKG---DRRSTEISLVIRQTMEACILTHLMPRSQIDIYVQVLSA 126
                      + + KPK     +   E  +++++T+E+  +  + P +   + VQV+  
Sbjct: 63  -----------EVIWKPKTGQIGKMEKEYEMILKRTLESICIRTIYPNTTTSVIVQVVHD 111

Query: 127 DGG 129
           DG 
Sbjct: 112 DGA 114


>Glyma18g46510.1 
          Length = 235

 Score = 57.4 bits (137), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 33/123 (26%), Positives = 60/123 (48%), Gaps = 16/123 (13%)

Query: 10  RLDGRRPMEMRQLRAQIGAVAKADGSAVFEMGNTKVIAAVYGPREVQNRSQQINDQALVR 69
           R DGR P ++R L      + ++ GSA +  G TKV+AAVYGP+    +S+     ++  
Sbjct: 5   RPDGRTPNQLRPLVCSCSILHRSHGSASWAQGETKVLAAVYGPKAGTKKSENPEKASI-- 62

Query: 70  CEYSMANFSTGDRMRKPKG---DRRSTEISLVIRQTMEACILTHLMPRSQIDIYVQVLSA 126
                      + + KPK     +   E  +++++T+E+  +  + P +   + VQV+  
Sbjct: 63  -----------EVIWKPKTGQIGKVEKEYEMILKRTLESICIRTIYPNTTTSVIVQVVHD 111

Query: 127 DGG 129
           DG 
Sbjct: 112 DGA 114