Jatropha Genome Database

JcCA0224821.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0224821.10 + phase: 0 
         (164 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma01g41990.1                                                        77   6e-15
Glyma12g00780.1                                                        71   6e-13
Glyma11g03360.1                                                        63   1e-10
Glyma06g47640.1                                                        63   1e-10
Glyma17g14750.1                                                        63   1e-10
Glyma05g04290.1                                                        63   1e-10
Glyma05g04290.2                                                        63   2e-10
Glyma17g14750.2                                                        62   2e-10
Glyma05g04290.3                                                        62   2e-10
Glyma09g36580.1                                                        49   3e-06

>Glyma01g41990.1 
          Length = 653

 Score = 77.4 bits (189), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 35/50 (70%), Positives = 42/50 (84%), Gaps = 2/50 (4%)

Query: 97  RGVSAGVSQKANLI--SSHSESPDYPWNNSMLSWQRTAFHFQPEKNWMNG 144
           RGVSAGVS+K++ +  S++     YPWNNSMLSWQRTA+HFQPEKNWMNG
Sbjct: 88  RGVSAGVSEKSSWLFNSNNGNGESYPWNNSMLSWQRTAYHFQPEKNWMNG 137


>Glyma12g00780.1 
          Length = 631

 Score = 70.9 bits (172), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 35/67 (52%), Positives = 45/67 (67%), Gaps = 2/67 (2%)

Query: 92  LRPVSRGVSAGVSQKANLISSHSESPDYPWNNSMLSWQRTAFHFQPEKNWMNGRFCKLDF 151
           L P +RGV+ GVS K+N   SH  S  Y W N+MLSWQRTAFHFQP++NWMN     L +
Sbjct: 59  LIPKARGVAEGVSAKSNQYLSHKAS--YNWTNAMLSWQRTAFHFQPQRNWMNDPNGPLFY 116

Query: 152 VSFQLLF 158
           + +  +F
Sbjct: 117 MGWYHVF 123


>Glyma11g03360.1 
          Length = 563

 Score = 63.2 bits (152), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 30/64 (46%), Positives = 37/64 (57%)

Query: 91  ILRPVSRGVSAGVSQKANLISSHSESPDYPWNNSMLSWQRTAFHFQPEKNWMNGRFCKLD 150
            L P    +S        L S++     YPWNNS+LSWQRTA+HFQPEKNWMNG     +
Sbjct: 43  FLTPNELELSPDTKSSWQLNSNNGSGESYPWNNSVLSWQRTAYHFQPEKNWMNGPMFYKE 102

Query: 151 FVSF 154
           +  F
Sbjct: 103 WYHF 106


>Glyma06g47640.1 
          Length = 580

 Score = 63.2 bits (152), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 31/64 (48%), Positives = 39/64 (60%), Gaps = 4/64 (6%)

Query: 97  RGVSAGVSQKANLISSHSESPDYPWNNSMLSWQRTAFHFQPEKNWMNGRFCKLDFVSFQL 156
           RG + GVS K+N    H  S  Y W N+M SWQRTAFHFQP+ NWMNG    + +  + L
Sbjct: 24  RGAAQGVSAKSNPPLFHKVS--YNWTNAMFSWQRTAFHFQPQNNWMNGPLFHMGW--YHL 79

Query: 157 LFIY 160
            + Y
Sbjct: 80  FYQY 83


>Glyma17g14750.1 
          Length = 645

 Score = 63.2 bits (152), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 35/53 (66%), Positives = 42/53 (79%), Gaps = 3/53 (5%)

Query: 94  PVSRGVSAGVSQKANLI---SSHSESPDYPWNNSMLSWQRTAFHFQPEKNWMN 143
           PVSRGVS+GVS+K++ +        S  +PW+NSMLSWQRTAFHFQPEKNWMN
Sbjct: 75  PVSRGVSSGVSEKSSSMLFAVKDGASEAFPWDNSMLSWQRTAFHFQPEKNWMN 127


>Glyma05g04290.1 
          Length = 645

 Score = 63.2 bits (152), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 35/53 (66%), Positives = 42/53 (79%), Gaps = 3/53 (5%)

Query: 94  PVSRGVSAGVSQKANLI---SSHSESPDYPWNNSMLSWQRTAFHFQPEKNWMN 143
           PVSRGVS+GVS+K++ +        S  +PW+NSMLSWQRTAFHFQPEKNWMN
Sbjct: 75  PVSRGVSSGVSEKSSSMLFAVKDGASKAFPWDNSMLSWQRTAFHFQPEKNWMN 127


>Glyma05g04290.2 
          Length = 554

 Score = 62.8 bits (151), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 35/53 (66%), Positives = 42/53 (79%), Gaps = 3/53 (5%)

Query: 94  PVSRGVSAGVSQKANLI---SSHSESPDYPWNNSMLSWQRTAFHFQPEKNWMN 143
           PVSRGVS+GVS+K++ +        S  +PW+NSMLSWQRTAFHFQPEKNWMN
Sbjct: 75  PVSRGVSSGVSEKSSSMLFAVKDGASKAFPWDNSMLSWQRTAFHFQPEKNWMN 127


>Glyma17g14750.2 
          Length = 481

 Score = 62.4 bits (150), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 35/53 (66%), Positives = 42/53 (79%), Gaps = 3/53 (5%)

Query: 94  PVSRGVSAGVSQKANLI---SSHSESPDYPWNNSMLSWQRTAFHFQPEKNWMN 143
           PVSRGVS+GVS+K++ +        S  +PW+NSMLSWQRTAFHFQPEKNWMN
Sbjct: 75  PVSRGVSSGVSEKSSSMLFAVKDGASEAFPWDNSMLSWQRTAFHFQPEKNWMN 127


>Glyma05g04290.3 
          Length = 478

 Score = 62.4 bits (150), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 35/53 (66%), Positives = 42/53 (79%), Gaps = 3/53 (5%)

Query: 94  PVSRGVSAGVSQKANLI---SSHSESPDYPWNNSMLSWQRTAFHFQPEKNWMN 143
           PVSRGVS+GVS+K++ +        S  +PW+NSMLSWQRTAFHFQPEKNWMN
Sbjct: 75  PVSRGVSSGVSEKSSSMLFAVKDGASKAFPWDNSMLSWQRTAFHFQPEKNWMN 127


>Glyma09g36580.1 
          Length = 531

 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 18/20 (90%), Positives = 20/20 (100%)

Query: 125 MLSWQRTAFHFQPEKNWMNG 144
           MLSWQRTAFHFQP++NWMNG
Sbjct: 1   MLSWQRTAFHFQPQRNWMNG 20