Jatropha Genome Database

JcCA0224481.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0224481.10 - phase: 1 /pseudo/partial
         (333 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g40740.1                                                       364   e-101
Glyma15g04700.2                                                       360   1e-99
Glyma15g04700.1                                                       359   2e-99

>Glyma13g40740.1 
          Length = 827

 Score =  364 bits (935), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 188/297 (63%), Positives = 216/297 (72%), Gaps = 15/297 (5%)

Query: 20  CQQCEASLQFLQSLCQQKLFRERLLRNKELCGKGGVLFLAHGILKLKITAPFVESSTVVA 79
           CQQCEASLQFLQSLCQQ  F+ERLL+NKELC KG +LFLA  ILKL I   F   S ++A
Sbjct: 144 CQQCEASLQFLQSLCQQFFFKERLLKNKELCEKGSILFLAQSILKLHIQPSF--PSRIMA 201

Query: 80  AVSRLKAKVLSILLHLCEAESISYLDEVASSPGSLDXXXXXXXXXXXXXXXXXXKDPKHL 139
           A+SRLKAK+LSILL LCE ESISYLDEVASS  SLD                       +
Sbjct: 202 AISRLKAKILSILLSLCEVESISYLDEVASSARSLDLAKSVALEYAS------------M 249

Query: 140 SACSERTFPMGLLRLNAMRLADIFSDDSNFRSYITTCFTKVLTAIFSLPHGEFLSIWCSS 199
              +  +FPMG ++LNAMRLADIFSDDSNFRSY+  CFTKVLTAI SL HG+FLS WCSS
Sbjct: 250 PLSTSISFPMGFVQLNAMRLADIFSDDSNFRSYMILCFTKVLTAIISLSHGDFLSCWCSS 309

Query: 200 ELPPREEDATLEYDVFTAAGWFLDTFSSLDQSSAINLEITLIPSNMPQATYAHQRTSLFV 259
            L   EEDA+LEYD+F A GW LD ++SLD  +A NLE  LIP++MP+A+YAH RTSLFV
Sbjct: 310 NLLKMEEDASLEYDIFAAVGWILD-YTSLDVRNATNLEFNLIPNSMPKASYAHHRTSLFV 368

Query: 260 KVIANLHCFVPNICEEQERNLFLHKFCECMRMNPSESLPGFSFTSGANKAITVCRNL 316
           K  ANLHCFVPNICEEQERNLF+ K  EC++M+ S  LPGFSF S A KA    +NL
Sbjct: 369 KFFANLHCFVPNICEEQERNLFVLKVMECLQMDLSNLLPGFSFASDAPKAAIASKNL 425


>Glyma15g04700.2 
          Length = 931

 Score =  360 bits (924), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 190/313 (60%), Positives = 217/313 (69%), Gaps = 19/313 (6%)

Query: 20  CQQCEASLQFLQSLCQQKLFRERLLRNKELCGKGGVLFLAHGILKLKITAPFVESSTVVA 79
           CQQCEASLQFLQSLCQQK+F+ERLL+NKELC KG +LFLA  ILKL I   F   S ++A
Sbjct: 221 CQQCEASLQFLQSLCQQKMFKERLLKNKELCEKGSILFLAQSILKLHIQPSF--PSRIMA 278

Query: 80  AVSRLKAKVLSILLHLCEAESISYLDEVASSPGSLDXXXXXXXXXXXXXXXXXXK----- 134
           A+SRLKAK+LSILL LCEAESISYLDEVASS  SLD                  K     
Sbjct: 279 AISRLKAKILSILLSLCEAESISYLDEVASSVRSLDLAKSVALEVISQVLREIFKLTLFC 338

Query: 135 -----------DPKHLSACSERTFPMGLLRLNAMRLADIFSDDSNFRSYITTCFTKVLTA 183
                          L      +FPMG ++LNAMRLADIFSDDSNFRSY+  CFTKVLTA
Sbjct: 339 GGLQYASIPLSTSMSLLHAMMISFPMGFVQLNAMRLADIFSDDSNFRSYMILCFTKVLTA 398

Query: 184 IFSLPHGEFLSIWCSSELPPREEDATLEYDVFTAAGWFLDTFSSLDQSSAINLEITLIPS 243
           I SL HG+FLS WCSS L   EEDA++EYD+F A GW LD  +S D  +A NLE  LIP+
Sbjct: 399 IISLSHGDFLSCWCSSNLSETEEDASIEYDIFAAVGWILDN-TSPDVRNATNLEFNLIPN 457

Query: 244 NMPQATYAHQRTSLFVKVIANLHCFVPNICEEQERNLFLHKFCECMRMNPSESLPGFSFT 303
           +MP+A+YAH RTSLFVK  ANLHCFVPNICEEQERNLF+ K  EC++M+ S  LPGFSF 
Sbjct: 458 SMPKASYAHHRTSLFVKFFANLHCFVPNICEEQERNLFVLKVMECLQMDLSNLLPGFSFA 517

Query: 304 SGANKAITVCRNL 316
           S A KA    +NL
Sbjct: 518 SDAPKAAIASKNL 530


>Glyma15g04700.1 
          Length = 954

 Score =  359 bits (922), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 190/313 (60%), Positives = 217/313 (69%), Gaps = 19/313 (6%)

Query: 20  CQQCEASLQFLQSLCQQKLFRERLLRNKELCGKGGVLFLAHGILKLKITAPFVESSTVVA 79
           CQQCEASLQFLQSLCQQK+F+ERLL+NKELC KG +LFLA  ILKL I   F   S ++A
Sbjct: 221 CQQCEASLQFLQSLCQQKMFKERLLKNKELCEKGSILFLAQSILKLHIQPSF--PSRIMA 278

Query: 80  AVSRLKAKVLSILLHLCEAESISYLDEVASSPGSLDXXXXXXXXXXXXXXXXXXK----- 134
           A+SRLKAK+LSILL LCEAESISYLDEVASS  SLD                  K     
Sbjct: 279 AISRLKAKILSILLSLCEAESISYLDEVASSVRSLDLAKSVALEVISQVLREIFKLTLFC 338

Query: 135 -----------DPKHLSACSERTFPMGLLRLNAMRLADIFSDDSNFRSYITTCFTKVLTA 183
                          L      +FPMG ++LNAMRLADIFSDDSNFRSY+  CFTKVLTA
Sbjct: 339 GGLQYASIPLSTSMSLLHAMMISFPMGFVQLNAMRLADIFSDDSNFRSYMILCFTKVLTA 398

Query: 184 IFSLPHGEFLSIWCSSELPPREEDATLEYDVFTAAGWFLDTFSSLDQSSAINLEITLIPS 243
           I SL HG+FLS WCSS L   EEDA++EYD+F A GW LD  +S D  +A NLE  LIP+
Sbjct: 399 IISLSHGDFLSCWCSSNLSETEEDASIEYDIFAAVGWILDN-TSPDVRNATNLEFNLIPN 457

Query: 244 NMPQATYAHQRTSLFVKVIANLHCFVPNICEEQERNLFLHKFCECMRMNPSESLPGFSFT 303
           +MP+A+YAH RTSLFVK  ANLHCFVPNICEEQERNLF+ K  EC++M+ S  LPGFSF 
Sbjct: 458 SMPKASYAHHRTSLFVKFFANLHCFVPNICEEQERNLFVLKVMECLQMDLSNLLPGFSFA 517

Query: 304 SGANKAITVCRNL 316
           S A KA    +NL
Sbjct: 518 SDAPKAAIASKNL 530