Jatropha Genome Database

JcCA0224291.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0224291.10 + phase: 0 /partial
         (71 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g11980.1                                                        78   2e-15
Glyma04g42790.1                                                        77   5e-15
Glyma04g42550.2                                                        66   8e-12
Glyma04g42550.1                                                        66   8e-12
Glyma04g42550.4                                                        66   8e-12
Glyma04g42550.3                                                        66   8e-12
Glyma06g12210.1                                                        66   9e-12
Glyma05g03440.2                                                        55   2e-08
Glyma05g03440.1                                                        55   2e-08
Glyma17g13990.1                                                        55   2e-08
Glyma16g22000.1                                                        50   6e-07

>Glyma06g11980.1 
          Length = 361

 Score = 78.2 bits (191), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 31/67 (46%), Positives = 47/67 (70%)

Query: 3   WVDKYRPKTLDQVIAHEDIAQNLKKLVTEQDCPHLLFYGPSGSGKKTLIMALLRQIFGAS 62
           WV+KYRP++LD V AH DI   + +L TE   PHLL YGP G+GK + I+A+ R+++G+ 
Sbjct: 40  WVEKYRPQSLDDVAAHRDIVDTIDRLTTENRLPHLLLYGPPGTGKTSTILAVARKLYGSQ 99

Query: 63  AEKVKVE 69
            + + +E
Sbjct: 100 YQNMILE 106


>Glyma04g42790.1 
          Length = 363

 Score = 76.6 bits (187), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 31/67 (46%), Positives = 46/67 (68%)

Query: 3   WVDKYRPKTLDQVIAHEDIAQNLKKLVTEQDCPHLLFYGPSGSGKKTLIMALLRQIFGAS 62
           WV+KYRP +LD V AH DI   + +L TE   PHLL YGP G+GK + I+A+ R+++G+ 
Sbjct: 42  WVEKYRPLSLDDVAAHRDIVDTIDRLTTENRLPHLLLYGPPGTGKTSTILAVARKLYGSQ 101

Query: 63  AEKVKVE 69
            + + +E
Sbjct: 102 YQNMILE 108


>Glyma04g42550.2 
          Length = 294

 Score = 66.2 bits (160), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 27/66 (40%), Positives = 40/66 (60%)

Query: 3  WVDKYRPKTLDQVIAHEDIAQNLKKLVTEQDCPHLLFYGPSGSGKKTLIMALLRQIFGAS 62
          WV+KYRPK +  V   +++ + L   +    CPH+LFYGP G+GK T  +A+  Q+FG  
Sbjct: 11 WVEKYRPKQVKDVAHQDEVVRVLTNTLETGSCPHMLFYGPPGTGKTTTALAIAHQLFGPE 70

Query: 63 AEKVKV 68
            K +V
Sbjct: 71 LYKSRV 76


>Glyma04g42550.1 
          Length = 364

 Score = 66.2 bits (160), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 27/66 (40%), Positives = 40/66 (60%)

Query: 3  WVDKYRPKTLDQVIAHEDIAQNLKKLVTEQDCPHLLFYGPSGSGKKTLIMALLRQIFGAS 62
          WV+KYRPK +  V   +++ + L   +    CPH+LFYGP G+GK T  +A+  Q+FG  
Sbjct: 11 WVEKYRPKQVKDVAHQDEVVRVLTNTLETGSCPHMLFYGPPGTGKTTTALAIAHQLFGPE 70

Query: 63 AEKVKV 68
            K +V
Sbjct: 71 LYKSRV 76


>Glyma04g42550.4 
          Length = 342

 Score = 65.9 bits (159), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 27/66 (40%), Positives = 40/66 (60%)

Query: 3  WVDKYRPKTLDQVIAHEDIAQNLKKLVTEQDCPHLLFYGPSGSGKKTLIMALLRQIFGAS 62
          WV+KYRPK +  V   +++ + L   +    CPH+LFYGP G+GK T  +A+  Q+FG  
Sbjct: 11 WVEKYRPKQVKDVAHQDEVVRVLTNTLETGSCPHMLFYGPPGTGKTTTALAIAHQLFGPE 70

Query: 63 AEKVKV 68
            K +V
Sbjct: 71 LYKSRV 76


>Glyma04g42550.3 
          Length = 342

 Score = 65.9 bits (159), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 27/66 (40%), Positives = 40/66 (60%)

Query: 3  WVDKYRPKTLDQVIAHEDIAQNLKKLVTEQDCPHLLFYGPSGSGKKTLIMALLRQIFGAS 62
          WV+KYRPK +  V   +++ + L   +    CPH+LFYGP G+GK T  +A+  Q+FG  
Sbjct: 11 WVEKYRPKQVKDVAHQDEVVRVLTNTLETGSCPHMLFYGPPGTGKTTTALAIAHQLFGPE 70

Query: 63 AEKVKV 68
            K +V
Sbjct: 71 LYKSRV 76


>Glyma06g12210.1 
          Length = 342

 Score = 65.9 bits (159), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 27/66 (40%), Positives = 40/66 (60%)

Query: 3  WVDKYRPKTLDQVIAHEDIAQNLKKLVTEQDCPHLLFYGPSGSGKKTLIMALLRQIFGAS 62
          WV+KYRPK +  V   +++ + L   +    CPH+LFYGP G+GK T  +A+  Q+FG  
Sbjct: 11 WVEKYRPKQVKDVAHQDEVVRVLTNTLETGSCPHMLFYGPPGTGKTTTALAIAHQLFGPE 70

Query: 63 AEKVKV 68
            K +V
Sbjct: 71 LYKSRV 76


>Glyma05g03440.2 
          Length = 302

 Score = 54.7 bits (130), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 36/59 (61%)

Query: 3  WVDKYRPKTLDQVIAHEDIAQNLKKLVTEQDCPHLLFYGPSGSGKKTLIMALLRQIFGA 61
          WV+KYRP  +  ++ +ED    L+ +  + + P+L+  GP G+GK T I+AL  ++ G 
Sbjct: 14 WVEKYRPSKVADIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHELLGG 72


>Glyma05g03440.1 
          Length = 331

 Score = 54.7 bits (130), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 36/59 (61%)

Query: 3  WVDKYRPKTLDQVIAHEDIAQNLKKLVTEQDCPHLLFYGPSGSGKKTLIMALLRQIFGA 61
          WV+KYRP  +  ++ +ED    L+ +  + + P+L+  GP G+GK T I+AL  ++ G 
Sbjct: 14 WVEKYRPSKVADIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHELLGG 72


>Glyma17g13990.1 
          Length = 332

 Score = 54.7 bits (130), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 36/59 (61%)

Query: 3  WVDKYRPKTLDQVIAHEDIAQNLKKLVTEQDCPHLLFYGPSGSGKKTLIMALLRQIFGA 61
          WV+KYRP  +  ++ +ED    L+ +  + + P+L+  GP G+GK T I+AL  ++ G 
Sbjct: 15 WVEKYRPSKVADIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHELLGG 73


>Glyma16g22000.1 
          Length = 119

 Score = 50.1 bits (118), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 18/57 (31%), Positives = 34/57 (59%)

Query: 3  WVDKYRPKTLDQVIAHEDIAQNLKKLVTEQDCPHLLFYGPSGSGKKTLIMALLRQIF 59
          WV+ YR   +  ++ +ED    L+ +  + + P+L+ +GP G+GK T I+AL  ++ 
Sbjct: 14 WVENYRSSNVINIVDNEDTVSRLQVIARDDNMPNLILFGPPGTGKTTSIIALAHELL 70