Jatropha Genome Database

JcCA0214811.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0214811.10 - phase: 0 /pseudo
         (162 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g46300.1                                                       239   1e-63
Glyma14g02260.1                                                       233   7e-62
Glyma14g02410.1                                                       232   1e-61
Glyma03g15590.1                                                        65   2e-11
Glyma13g27140.1                                                        57   7e-09
Glyma12g36450.1                                                        57   9e-09

>Glyma02g46300.1 
          Length = 447

 Score =  239 bits (609), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 108/126 (85%), Positives = 119/126 (94%)

Query: 1   MHRQVIHTEPFIGQPKVKSAAAACRSINSTIQIVEHQEALRTHNALEIFSQYDVIVDATD 60
           MHRQVIHTE ++G+PKVKSAAAACRSINSTIQ+VEH+EALRT NALE+ S+YD+IVDATD
Sbjct: 113 MHRQVIHTEAYVGKPKVKSAAAACRSINSTIQVVEHEEALRTSNALELLSKYDIIVDATD 172

Query: 61  NAPSRYMISDCCVVLGKPLVSGAALGLEGQLTVYNYKGGPCYRCLFPTPPPTTACQRCAD 120
           NAP+RY+ISDCCVVLGKPLVSGAALGLEGQLTVYNY GGPCYRCLFPTPPP TACQ CA+
Sbjct: 173 NAPTRYLISDCCVVLGKPLVSGAALGLEGQLTVYNYNGGPCYRCLFPTPPPRTACQSCAE 232

Query: 121 SGVLGV 126
            GVLGV
Sbjct: 233 GGVLGV 238


>Glyma14g02260.1 
          Length = 457

 Score =  233 bits (594), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 107/126 (84%), Positives = 118/126 (93%)

Query: 1   MHRQVIHTEPFIGQPKVKSAAAACRSINSTIQIVEHQEALRTHNALEIFSQYDVIVDATD 60
           MHRQVIHTE ++G+PKVKSAAAAC SINSTIQ+VEH+EAL+T NALEI S+YD+IVDATD
Sbjct: 123 MHRQVIHTEAYVGKPKVKSAAAACCSINSTIQVVEHEEALQTSNALEILSKYDIIVDATD 182

Query: 61  NAPSRYMISDCCVVLGKPLVSGAALGLEGQLTVYNYKGGPCYRCLFPTPPPTTACQRCAD 120
           NAP+RY+ISDCCVVLGKPLVSGAALGLEGQLTVYNY GGPCYRCLFPTPPP TACQ CA+
Sbjct: 183 NAPTRYLISDCCVVLGKPLVSGAALGLEGQLTVYNYNGGPCYRCLFPTPPPRTACQSCAE 242

Query: 121 SGVLGV 126
            GVLGV
Sbjct: 243 GGVLGV 248


>Glyma14g02410.1 
          Length = 361

 Score =  232 bits (592), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 107/126 (84%), Positives = 118/126 (93%)

Query: 1   MHRQVIHTEPFIGQPKVKSAAAACRSINSTIQIVEHQEALRTHNALEIFSQYDVIVDATD 60
           MHRQVIHTE ++G+PKVKSAAAAC SINSTIQ+VEH+EAL+T NALEI S+YD+IVDATD
Sbjct: 27  MHRQVIHTEAYVGKPKVKSAAAACCSINSTIQVVEHEEALQTSNALEILSKYDIIVDATD 86

Query: 61  NAPSRYMISDCCVVLGKPLVSGAALGLEGQLTVYNYKGGPCYRCLFPTPPPTTACQRCAD 120
           NAP+RY+ISDCCVVLGKPLVSGAALGLEGQLTVYNY GGPCYRCLFPTPPP TACQ CA+
Sbjct: 87  NAPTRYLISDCCVVLGKPLVSGAALGLEGQLTVYNYNGGPCYRCLFPTPPPRTACQSCAE 146

Query: 121 SGVLGV 126
            GVLGV
Sbjct: 147 GGVLGV 152


>Glyma03g15590.1 
          Length = 131

 Score = 65.5 bits (158), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 28/40 (70%), Positives = 29/40 (72%)

Query: 91  LTVYNYKGGPCYRCLFPTPPPTTACQRCADSGVLGVGMLH 130
           LTVYNY GG CY CLFPTPPP T CQ C   GVLGVG  +
Sbjct: 22  LTVYNYNGGSCYGCLFPTPPPRTTCQSCVKGGVLGVGNFY 61


>Glyma13g27140.1 
          Length = 638

 Score = 57.4 bits (137), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 32/114 (28%), Positives = 53/114 (46%), Gaps = 2/114 (1%)

Query: 1   MHRQVIHTEPFIGQPKVKSAAAACRSINSTIQIVEHQEALRTHN-ALEIFSQYDVIVDAT 59
           ++RQ +  +  +GQ K K A  A       I I  +   ++     ++ F Q++V+++  
Sbjct: 53  LNRQFLFRQFHVGQSKAKVARDAVLKFRPHINITPYHANVKDPEFNVDFFKQFNVVLNGL 112

Query: 60  DNAPSRYMISDCCVVLGKPLVSGAALGLEGQLTVYNYKGGPCYRCLFPTPPPTT 113
           DN  +R  ++  C+    PLV     G  GQ+TV+      CY C  P P P T
Sbjct: 113 DNLDARRHVNRLCLAANVPLVESGTTGFLGQVTVHVKGKTECYECQ-PKPAPKT 165


>Glyma12g36450.1 
          Length = 636

 Score = 57.0 bits (136), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 32/114 (28%), Positives = 53/114 (46%), Gaps = 2/114 (1%)

Query: 1   MHRQVIHTEPFIGQPKVKSAAAACRSINSTIQIVEHQEALRTHN-ALEIFSQYDVIVDAT 59
           ++RQ +  +  +GQ K K A  A       I I  +   ++     ++ F Q++V+++  
Sbjct: 51  LNRQFLFRQFHVGQSKAKVARDAVLKFRPHINITPYHANVKDPEFNVDFFKQFNVVLNGL 110

Query: 60  DNAPSRYMISDCCVVLGKPLVSGAALGLEGQLTVYNYKGGPCYRCLFPTPPPTT 113
           DN  +R  ++  C+    PLV     G  GQ+TV+      CY C  P P P T
Sbjct: 111 DNLDARRHVNRLCLAANVPLVESGTTGFLGQVTVHVKGRTECYECQ-PKPAPKT 163