Jatropha Genome Database

JcCA0207121.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0207121.10 + phase: 0 /pseudo
         (238 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma03g14690.1                                                       321   4e-88
Glyma01g27250.1                                                       321   5e-88
Glyma01g27250.2                                                       283   1e-76

>Glyma03g14690.1 
          Length = 887

 Score =  321 bits (822), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 149/180 (82%), Positives = 168/180 (93%)

Query: 27  EETKKNKFREREASDDALGYPDIDEDALLNTQCPKNLELRWQTEVSSSIYASPLIADINS 86
           + ++KN FREREASDD+LGYP+IDEDAL+N++CPKNLELRWQTEVSSSIYA+PLIADINS
Sbjct: 29  DSSRKNTFREREASDDSLGYPEIDEDALVNSKCPKNLELRWQTEVSSSIYANPLIADINS 88

Query: 87  DGKLDIVVPSFVHYLEVLEGSDGDKMPGWPAFHQSTVHASPLLYDIDKDGVREIALATYN 146
           DGKL+IVVPSFVHYLEVLEG+DGDKMPGWPAFHQSTVH+SPLLYDIDKDGVREIALATYN
Sbjct: 89  DGKLEIVVPSFVHYLEVLEGADGDKMPGWPAFHQSTVHSSPLLYDIDKDGVREIALATYN 148

Query: 147 GEVLFFRVSGYMMTEKLVVPRRSVKKDWHVGLNPDPVDRSHPDVHDEQLISEAAGKKPVS 206
           GEVLFFRVSGYMM++KL VPRR V K W VGL+PDPVDRSHPDVHD+QL+ +A  K  +S
Sbjct: 149 GEVLFFRVSGYMMSDKLEVPRRKVLKKWFVGLDPDPVDRSHPDVHDDQLVQDATIKNSMS 208


>Glyma01g27250.1 
          Length = 887

 Score =  321 bits (822), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 151/178 (84%), Positives = 166/178 (93%)

Query: 30  KKNKFREREASDDALGYPDIDEDALLNTQCPKNLELRWQTEVSSSIYASPLIADINSDGK 89
           KKN FREREASDD+LGYP+IDEDAL+N++CPKNLELRWQTEVSSSIYA+PLIADINSDGK
Sbjct: 33  KKNTFREREASDDSLGYPEIDEDALVNSKCPKNLELRWQTEVSSSIYANPLIADINSDGK 92

Query: 90  LDIVVPSFVHYLEVLEGSDGDKMPGWPAFHQSTVHASPLLYDIDKDGVREIALATYNGEV 149
           L+IVVPSFVHYLEVLEG+DGDKMPGWPAFHQSTVH+SPLLYDIDKDGVREIALATYNGEV
Sbjct: 93  LEIVVPSFVHYLEVLEGADGDKMPGWPAFHQSTVHSSPLLYDIDKDGVREIALATYNGEV 152

Query: 150 LFFRVSGYMMTEKLVVPRRSVKKDWHVGLNPDPVDRSHPDVHDEQLISEAAGKKPVSH 207
           LFFRVSGYMM++KL VPRR V K W VGL+PDPVDRSHPDVHD+QLI +A  K  +S 
Sbjct: 153 LFFRVSGYMMSDKLEVPRRRVLKKWFVGLDPDPVDRSHPDVHDDQLIQDATIKNSMSQ 210


>Glyma01g27250.2 
          Length = 858

 Score =  283 bits (724), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 133/157 (84%), Positives = 146/157 (92%)

Query: 51  EDALLNTQCPKNLELRWQTEVSSSIYASPLIADINSDGKLDIVVPSFVHYLEVLEGSDGD 110
           EDAL+N++CPKNLELRWQTEVSSSIYA+PLIADINSDGKL+IVVPSFVHYLEVLEG+DGD
Sbjct: 25  EDALVNSKCPKNLELRWQTEVSSSIYANPLIADINSDGKLEIVVPSFVHYLEVLEGADGD 84

Query: 111 KMPGWPAFHQSTVHASPLLYDIDKDGVREIALATYNGEVLFFRVSGYMMTEKLVVPRRSV 170
           KMPGWPAFHQSTVH+SPLLYDIDKDGVREIALATYNGEVLFFRVSGYMM++KL VPRR V
Sbjct: 85  KMPGWPAFHQSTVHSSPLLYDIDKDGVREIALATYNGEVLFFRVSGYMMSDKLEVPRRRV 144

Query: 171 KKDWHVGLNPDPVDRSHPDVHDEQLISEAAGKKPVSH 207
            K W VGL+PDPVDRSHPDVHD+QLI +A  K  +S 
Sbjct: 145 LKKWFVGLDPDPVDRSHPDVHDDQLIQDATIKNSMSQ 181