Jatropha Genome Database

JcCA0194091.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0194091.10 - phase: 2 /partial
         (473 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g46380.1                                                       505   e-143
Glyma18g36060.1                                                       484   e-137
Glyma05g13570.1                                                        87   3e-17

>Glyma08g46380.1 
          Length = 351

 Score =  505 bits (1301), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 244/351 (69%), Positives = 272/351 (77%), Gaps = 52/351 (14%)

Query: 103 PVQLFRKLKREYYHMGTFHGKPSGCLMYDLSHSLRKNTNELLWLACVSLTDQFVHERLTD 162
           P++L+RKLK+ YY +GTFHGKPSGCLMY+L+  LRKNTNELLW+AC+SLTDQFVHERL+D
Sbjct: 49  PIKLYRKLKKGYYKLGTFHGKPSGCLMYELADKLRKNTNELLWIACISLTDQFVHERLSD 108

Query: 163 ERYQAGVMELEQHINSSGNLEAVSVVTLKDGTKIRAPETSRIQYEDEPRLMLLREWNLFD 222
           ERY  GVMELEQHINSSGNL+AV+ VTLKDGTKIRAP + RI YED+PRLMLL+EW+LFD
Sbjct: 109 ERYHDGVMELEQHINSSGNLDAVTSVTLKDGTKIRAPNSLRITYEDQPRLMLLQEWSLFD 168

Query: 223 SMLCSSYIAPKLKTWSDNGMKKLKLLLARMGFALVDCQQKFQYMNLEVKRKMKDEFERFL 282
           SM+CSSYIA KLKTWS+NG+KKLKLL   MGFAL DCQQKFQ+MNLEVKRKMK EFERFL
Sbjct: 169 SMMCSSYIATKLKTWSENGIKKLKLLFGTMGFALGDCQQKFQHMNLEVKRKMKKEFERFL 228

Query: 283 PEYGLTDFYYRSFLRLHGYSSRVSAADVVYGVTALLESFVNSDGSCASKQFGVAYDALSL 342
           PEYGLTDFYYRSF+R   YSS++SAADVVYGVTALLESFV SDGSCASKQFG        
Sbjct: 229 PEYGLTDFYYRSFIRTLKYSSKISAADVVYGVTALLESFVRSDGSCASKQFG-------- 280

Query: 343 NNLDKLKIGMQQAIKVQRAILRQGSTAITKSGSVRSGRKFRWVKLEDSVDTKLLGYPQAL 402
                                                       LEDS D  LLGYPQAL
Sbjct: 281 --------------------------------------------LEDSNDATLLGYPQAL 296

Query: 403 TKFCYFIMDALREKGARAKPLVCACLSQEPNKMLIVGVCGKPRLGAVQGNA 453
           TKFCYFIMDALREKGA+ KPL+CAC+SQEP K+LIVGVCG+PRLG  QGNA
Sbjct: 297 TKFCYFIMDALREKGAKMKPLICACVSQEPGKVLIVGVCGRPRLGGAQGNA 347


>Glyma18g36060.1 
          Length = 317

 Score =  484 bits (1247), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 235/345 (68%), Positives = 261/345 (75%), Gaps = 52/345 (15%)

Query: 129 MYDLSHSLRKNTNELLWLACVSLTDQFVHERLTDERYQAGVMELEQHINSSGNLEAVSVV 188
           MY+L+  LRKNTNELLWLAC+SLTDQF+H+RL+DERY  GVMELEQHINSSGNL+ V++V
Sbjct: 1   MYELADKLRKNTNELLWLACISLTDQFLHDRLSDERYHDGVMELEQHINSSGNLDVVTLV 60

Query: 189 TLKDGTKIRAPETSRIQYEDEPRLMLLREWNLFDSMLCSSYIAPKLKTWSDNGMKKLKLL 248
           TLKDGTKIRAP  SRI YED+PRLMLL+EW+LFDSM+CSSYIA KLKTWS+NGMKKLKLL
Sbjct: 61  TLKDGTKIRAPNLSRITYEDQPRLMLLQEWSLFDSMMCSSYIATKLKTWSENGMKKLKLL 120

Query: 249 LARMGFALVDCQQKFQYMNLEVKRKMKDEFERFLPEYGLTDFYYRSFLRLHGYSSRVSAA 308
              MGFAL DCQQKFQ+MN+EVKR MK EFERFLPEYGLTDFYYRSF+R   YSS++SAA
Sbjct: 121 FGTMGFALGDCQQKFQHMNVEVKRNMKKEFERFLPEYGLTDFYYRSFIRTLKYSSKISAA 180

Query: 309 DVVYGVTALLESFVNSDGSCASKQFGVAYDALSLNNLDKLKIGMQQAIKVQRAILRQGST 368
           DVVYGVTALLESFV SDGSCASKQFG+                                 
Sbjct: 181 DVVYGVTALLESFVRSDGSCASKQFGL--------------------------------- 207

Query: 369 AITKSGSVRSGRKFRWVKLEDSVDTKLLGYPQALTKFCYFIMDALREKGARAKPLVCACL 428
                              EDS D  LLGYPQALTKFC FIMDALREKGA+ KPL+C C+
Sbjct: 208 -------------------EDSNDAMLLGYPQALTKFCLFIMDALREKGAKMKPLICVCV 248

Query: 429 SQEPNKMLIVGVCGKPRLGAVQGNAFGVAFRNAAEEIGAEVFHEL 473
           SQEP K+LIVGVCG+PRLG  Q NAFG+AFR AAEEIG E FHEL
Sbjct: 249 SQEPGKVLIVGVCGRPRLGGAQANAFGIAFRTAAEEIGTEFFHEL 293


>Glyma05g13570.1 
          Length = 96

 Score = 87.4 bits (215), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 39/60 (65%), Positives = 50/60 (83%)

Query: 1  RRLLNLGPRARVFVIDSHRPIHLHNLSEHNDSVIVLYTHDDEHQADLAYDFDVSALANAS 60
          R+ LNL   ARVFV+DSHRPIHL NLS+ ND V+VL+T +DE Q+DL+YDFD++ LANA+
Sbjct: 12 RKTLNLPSNARVFVVDSHRPIHLCNLSDQNDVVVVLFTKEDEGQSDLSYDFDLTTLANAA 71