Jatropha Genome Database

JcCA0165421.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0165421.10 + phase: 0 
         (72 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma10g31560.1                                                        72   1e-13
Glyma20g36020.1                                                        72   2e-13

>Glyma10g31560.1 
          Length = 926

 Score = 72.0 bits (175), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 34/53 (64%), Positives = 41/53 (77%)

Query: 1  MTIADSGCLMENGGSCLPCTPEEEKQIVKELIDEAELDLKEGNLYYVVSARYF 53
          MTIADS   M+N  SC+   PEEE +IV ELI E+EL+LKEGNLYYV+S R+F
Sbjct: 1  MTIADSVFPMDNVASCIQLPPEEENRIVSELIKESELNLKEGNLYYVISNRWF 53


>Glyma20g36020.1 
          Length = 937

 Score = 71.6 bits (174), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 34/53 (64%), Positives = 41/53 (77%)

Query: 1  MTIADSGCLMENGGSCLPCTPEEEKQIVKELIDEAELDLKEGNLYYVVSARYF 53
          MTIADS   M+N  SC+   PEEE +IV ELI E+EL+LKEGNLYYV+S R+F
Sbjct: 1  MTIADSVFPMDNVASCILLPPEEENRIVSELIKESELNLKEGNLYYVISNRWF 53