Jatropha Genome Database

JcCA0155261.40
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0155261.40 - phase: 2 /TE/pseudo/partial
         (655 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma20g06230.1                                                       219   1e-56
Glyma18g15600.1                                                       203   6e-52
Glyma14g22790.1                                                       164   4e-40
Glyma12g11870.1                                                        92   2e-18
Glyma17g20560.1                                                        84   4e-16
Glyma19g07480.1                                                        77   7e-14

>Glyma20g06230.1 
          Length = 561

 Score =  219 bits (557), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 123/274 (44%), Positives = 166/274 (60%), Gaps = 36/274 (13%)

Query: 343 NQFK-YNATTIYEWNIDGLSEYNILSILQQMTMAANAYKTQSIISNRAIAEILIAGFTGQ 401
           N FK ++A  IYEWNID   EYNI++ LQ MTM A AY+T    S   I +IL+AGF+GQ
Sbjct: 3   NNFKSFSANNIYEWNIDAQMEYNIMNTLQHMTMVATAYQTSHECSEETIIDILVAGFSGQ 62

Query: 402 LKGWWDYHLTDQQHLEILNSIQVNDEGEPIYDENGEVIQDAVSSLILTISLHFIGDPSHL 461
           LKG                +++ +  G+ I +++ + I  AV++LI TI+ HFIGDPS  
Sbjct: 63  LKGC---------------AVKTDLNGKVITNDDDKEIPGAVNTLIFTIAQHFIGDPSLW 107

Query: 462 KDKNAELLSNLKCHTLSDFQDYKTTFLTRLMLREDSSQAFWKEKFLAGLPYFLGEKVRNN 521
           KD++AELLSNLKC TL+DF+ Y+ TF TR+  REDS Q  WKEKF+AGLP  LG+KVR+ 
Sbjct: 108 KDRSAELLSNLKCRTLADFRWYRDTFPTRVYTREDSQQPLWKEKFIAGLPRSLGDKVRDK 167

Query: 522 IKQQYGQP-IPYSKLTYGQLISIIHKEGLQICHDLKLQRTLKYEMQKTKKELGSYCKQFD 580
           I+ Q     IPY  L+YGQLIS + K            R L  E  +TK++LGS+C+QF 
Sbjct: 168 IRSQSANGDIPYENLSYGQLISYVQK------------RQLAKEKAQTKRDLGSFCEQFG 215

Query: 581 YGITSSQRCDGQCSRT----HKP--KKHYTDKHY 608
                 Q+   Q SR     HKP  ++ ++ + Y
Sbjct: 216 LPACPKQK-KKQTSRKETQDHKPANRRRFSKRRY 248


>Glyma18g15600.1 
          Length = 287

 Score =  203 bits (516), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 103/207 (49%), Positives = 142/207 (68%), Gaps = 12/207 (5%)

Query: 374 MAANAYKTQSIISNRAIAEILIAGFTGQLKGWWDYHLTDQQHLEILNSIQVNDEGEPIYD 433
           M A AY+T    S   I +IL+AGF+GQLKGWWD +LT+++  +I ++++ +  G+ I +
Sbjct: 1   MVATAYQTSHECSEETIIDILVAGFSGQLKGWWDNYLTNEEKSKIYSAVKTDLNGKVITN 60

Query: 434 ENGEVIQDAVSSLILTISLHFIGDPSHLKDKNAELLSNLKCHTLSDFQDYKTTFLTRLML 493
           ++ + I DAV++LI TI+ HFIGDPS  KD+           TL+DF+ Y+ TFLTR+  
Sbjct: 61  DDDKEIPDAVNTLIFTIAQHFIGDPSLWKDR-----------TLADFRWYRDTFLTRVYT 109

Query: 494 REDSSQAFWKEKFLAGLPYFLGEKVRNNIK-QQYGQPIPYSKLTYGQLISIIHKEGLQIC 552
           REDS Q FWKEKFLAGLP  LG+KVR+ I+ Q     IPY  L+YGQLIS + K  L+IC
Sbjct: 110 REDSQQPFWKEKFLAGLPRSLGDKVRDKIRSQSVNGDIPYESLSYGQLISYVQKVALKIC 169

Query: 553 HDLKLQRTLKYEMQKTKKELGSYCKQF 579
            D K+QR L  E  +TK++LGS+C+QF
Sbjct: 170 QDDKIQRQLAKEKAQTKRDLGSFCEQF 196


>Glyma14g22790.1 
          Length = 408

 Score =  164 bits (414), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 84/170 (49%), Positives = 120/170 (70%), Gaps = 5/170 (2%)

Query: 330 APDLGIIDKPNTINQFK-YNATTIYEWNIDGLSEYNILSILQQMTMAANAYKTQSIISNR 388
           APDL + ++    N FK ++A  IYEWNID  +EYNI++ LQ MTM A AY+T    S  
Sbjct: 242 APDLLLEERGE--NNFKSFSANNIYEWNIDAQTEYNIMNTLQHMTMVATAYQTSHECSEE 299

Query: 389 AIAEILIAGFTGQLKGWWDYHLTDQQHLEILNSIQVNDEGEPIYDENGEVIQDAVSSLIL 448
            I +IL+AGF+GQLKGWWD +LT+++  +I ++++ +  G+ I +++ + I DAV++LI 
Sbjct: 300 TIIDILVAGFSGQLKGWWDNYLTNEEKSKIYSAVKTDLNGKVITNDDDKEIPDAVNTLIF 359

Query: 449 TISLHFIGDPSHLKDKNAELLSNLKCHTLSDFQDYKTTFLTRLMLREDSS 498
           TI+ HFIGDPS  KD++AELLSNLKC TL+DF+ Y+ T     + RE SS
Sbjct: 360 TIAQHFIGDPSLWKDRSAELLSNLKCRTLADFRWYRDT--QNQVFRERSS 407


>Glyma12g11870.1 
          Length = 130

 Score = 92.0 bits (227), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 45/86 (52%), Positives = 61/86 (70%), Gaps = 3/86 (3%)

Query: 330 APDLGIIDKPNTINQFK-YNATTIYEWNIDGLSEYNILSILQQMTMAANAYKTQSIISNR 388
           APDL + ++    N FK ++A  IYEWNID  +EYNI++ LQ MTM A AY+T    S  
Sbjct: 46  APDLLLEERGE--NNFKSFSANNIYEWNIDAQTEYNIMNTLQHMTMVAMAYQTSHECSEE 103

Query: 389 AIAEILIAGFTGQLKGWWDYHLTDQQ 414
            I +IL+AGF+GQLKGWWD +LT+++
Sbjct: 104 TIIDILVAGFSGQLKGWWDNYLTNEE 129


>Glyma17g20560.1 
          Length = 136

 Score = 84.3 bits (207), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 45/84 (53%), Positives = 55/84 (65%), Gaps = 17/84 (20%)

Query: 435 NGEVIQDAVSSLILTISLHFIGDPSHLKDKNAELLSNLKCHTLSDFQDYKTTFLTRLMLR 494
           N + I DAV++LI TI+ HFIGDPS  KD++AELLSNLK +T                 R
Sbjct: 51  NDKEIPDAVNTLIFTIAQHFIGDPSLWKDRSAELLSNLKVYT-----------------R 93

Query: 495 EDSSQAFWKEKFLAGLPYFLGEKV 518
           ED+ Q FWKEKFLAGLP  LG+K+
Sbjct: 94  EDNQQPFWKEKFLAGLPRSLGDKL 117


>Glyma19g07480.1 
          Length = 419

 Score = 77.0 bits (188), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 89/313 (28%), Positives = 146/313 (46%), Gaps = 69/313 (22%)

Query: 116 YEYLDYKLNEQTDIKFFDWYKLTKENESDKSLNPITIR-DKRPKW----IVND-QTIKSD 169
           YE+++     + ++ FFDW+            +   IR D    W    IVND + I+S+
Sbjct: 152 YEFVE---RVKINVLFFDWF------------HAYAIRKDIDYPWKQDIIVNDGELIQSE 196

Query: 170 FPPKT---ISKLKYQDNEVVCA-PYKIAPEHDANKKV--------IEQNNFSNASLICLN 217
            PP T   +  +K  +N+ V A  +K     D N++V        +EQ N++N  L  L 
Sbjct: 197 LPPATQYQLPNIKDSNNKPVMAISFKTK---DVNEEVTSKDMKSLMEQANYTNKYLQALG 253

Query: 218 TQLKRIENLLEDKTQVNEQQVKDKEK-----IKSHIFKPYQISQSSKQEFVNQLKDQLSK 272
             +K         T+V  +Q   +E      I+  +FKP+++S+ +K++ + +L+   S 
Sbjct: 254 ETIK---------TKVVPKQKSIEEASPSIPIEKPLFKPFKVSEKAKRK-IRELRKTKSL 303

Query: 273 LEVRSETTQQVAPDTPQAXXXXXXXXXXXXXDVSEPDSDDIKNFELNPITHNVIVNRAPD 332
           +E   +   ++                    +++  +S   K     P         APD
Sbjct: 304 IEGVGDNHSELL-----------NKIGCLLKNINPINSKHWKT----PSKLYYQRPTAPD 348

Query: 333 LGIIDKPNTINQFK-YNATTIYEWNIDGLSEYNILSILQQMTMAANAYKTQSIISNRAIA 391
           L + ++    N FK ++A  IYEWNID  ++YNI + LQ MTM A AY+T    S   I 
Sbjct: 349 LLLEERGE--NNFKNFSANNIYEWNIDAQTKYNITNTLQHMTMVATAYQTSQECSEETII 406

Query: 392 EILIAGFTGQLKG 404
           +IL+AGF+GQLKG
Sbjct: 407 DILVAGFSGQLKG 419