Jatropha Genome Database

JcCA0155261.30
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0155261.30 + phase: 0 /pseudo/partial
         (254 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma05g31480.1                                                       105   7e-23
Glyma08g14710.1                                                       103   2e-22
Glyma17g11030.1                                                        95   7e-20
Glyma05g00890.1                                                        94   1e-19

>Glyma05g31480.1 
          Length = 227

 Score =  105 bits (261), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 57/79 (72%), Positives = 68/79 (86%)

Query: 11 EIVFFDLETTVPNRIGQKFWVLEFGAIIVCPRKLVELESFSTLIRPKDLSVVALKSSRSD 70
          EIVFFDLETTVP R G++FWVLEFGAI+V P KL E+ES++TLIRPKDLSVV++KSSRSD
Sbjct: 2  EIVFFDLETTVPKRGGERFWVLEFGAIVVTPHKLTEIESYTTLIRPKDLSVVSVKSSRSD 61

Query: 71 GITREAVANAPILKKLQIR 89
          GITR+AV NAP  + +  R
Sbjct: 62 GITRKAVENAPSFEDVADR 80


>Glyma08g14710.1 
          Length = 229

 Score =  103 bits (257), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 56/79 (70%), Positives = 68/79 (86%)

Query: 11 EIVFFDLETTVPNRIGQKFWVLEFGAIIVCPRKLVELESFSTLIRPKDLSVVALKSSRSD 70
          EIVFFDLETTVP + G++FWVLEFGAI+V P KL E+ES++TLIRPKDLSVV++KSSRSD
Sbjct: 2  EIVFFDLETTVPKKGGERFWVLEFGAIVVTPHKLTEIESYTTLIRPKDLSVVSVKSSRSD 61

Query: 71 GITREAVANAPILKKLQIR 89
          GITR+AV NAP  + +  R
Sbjct: 62 GITRKAVENAPSFEDVADR 80



 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 27/39 (69%), Positives = 32/39 (82%), Gaps = 2/39 (5%)

Query: 187 RSRSNGKLQCGEESSRKSPPSTIGYQRTVPYTRGSLGKV 225
            S+S+G     EE+SRKSPP+T+GYQRTVPY RGSLGKV
Sbjct: 185 HSKSHG--SPSEETSRKSPPATLGYQRTVPYARGSLGKV 221


>Glyma17g11030.1 
          Length = 501

 Score = 94.7 bits (234), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 44/77 (57%), Positives = 58/77 (75%)

Query: 5  MYTSATEIVFFDLETTVPNRIGQKFWVLEFGAIIVCPRKLVELESFSTLIRPKDLSVVAL 64
          M    +EIVFFD+ET+VP R GQ F +LEFGAI+VCP+ L EL ++STL+RP +LSV++ 
Sbjct: 1  MGEDRSEIVFFDVETSVPTRTGQGFALLEFGAILVCPKTLTELRNYSTLVRPANLSVISP 60

Query: 65 KSSRSDGITREAVANAP 81
           S R +GIT  AV+ AP
Sbjct: 61 LSERCNGITAAAVSAAP 77


>Glyma05g00890.1 
          Length = 501

 Score = 94.0 bits (232), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 43/77 (55%), Positives = 55/77 (71%)

Query: 10 TEIVFFDLETTVPNRIGQKFWVLEFGAIIVCPRKLVELESFSTLIRPKDLSVVALKSSRS 69
          +EIVFFD+ET+VP R GQ F +LEFGAI+VCPR L EL  +STL+RP +LSV+   S R 
Sbjct: 6  SEIVFFDVETSVPTRAGQGFALLEFGAILVCPRTLTELRDYSTLVRPANLSVITPLSERC 65

Query: 70 DGITREAVANAPILKKL 86
          +GI   AV+ AP    +
Sbjct: 66 NGINAAAVSAAPTFADI 82