Jatropha Genome Database

JcCA0155261.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0155261.10 + phase: 0 
         (371 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g02260.1                                                       539   e-153
Glyma11g36180.1                                                       523   e-148
Glyma04g33100.1                                                        70   3e-12

>Glyma18g02260.1 
          Length = 360

 Score =  539 bits (1388), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 265/373 (71%), Positives = 314/373 (84%), Gaps = 17/373 (4%)

Query: 1   MDADTTDTQPEPVSLSSDPLSNQFGSLNDLAHELASLQDLANRGSWRSILDKVARARSLA 60
           MD++++++  +P      PLSN    ++D  H+++SL++LANRG+WRSI+DKV+RAR+L+
Sbjct: 1   MDSESSNSDSQP-----HPLSN---PIDDACHDMSSLEELANRGAWRSIIDKVSRARALS 52

Query: 61  LLTTPHDHLTYLAYNVLAFVKLRRFKDALTELDSVDDFDSHHYRYETYPKIYPHRHGSMV 120
           LL  PHDHLTYLA+N L+F KLRRF +A  ELDS++D DS HYRYETYPKIYP+R GSMV
Sbjct: 53  LLHKPHDHLTYLAFNALSFTKLRRFNEASAELDSLEDLDSSHYRYETYPKIYPNRIGSMV 112

Query: 121 PFSLRWLHAVIPLKLGNRQEGLDRFYILLDFVRGKLKEKQ---GFDFSSKIWRNREVFVM 177
           PFSLRWLHA+IP+KLG RQ+G+DRFYILLDFVRGK+KEK+       S  +WR REVFV+
Sbjct: 113 PFSLRWLHALIPIKLGQRQQGMDRFYILLDFVRGKIKEKEKLSNLGVSLNLWRKREVFVV 172

Query: 178 NWIISEHLKNKEFTICLDLIKDLVSRGNFDPVLLSKLGCIQMQIGDLEGAKGSFEKVEKL 237
           N II  HL  KEF +CL L+K+L+SR   DP+L+S+LG +Q+QIGDLEGAK SF KVE+L
Sbjct: 173 NCIIGNHLSQKEFGVCLSLMKELLSRDCSDPLLVSQLGYMQLQIGDLEGAKVSFLKVEEL 232

Query: 238 LEERIAGGSDESLSEVEFRNLVNRNKALVYLVGKDYVSAVREYEECIDRDPMDVVAINNK 297
                 G S+ SLSEVEFRNLVNRNKALVYLVGKDYVSAVREYEECI+RD  DVVA+NNK
Sbjct: 233 ------GKSNGSLSEVEFRNLVNRNKALVYLVGKDYVSAVREYEECIERDSADVVAVNNK 286

Query: 298 ALCLMYLRDLSDSIKVLENSLERVPTVALNETLVVNLCSMYELAYVNHSDIKRTLSNWIA 357
           ALCLMYLRDLSDSIKVLE++LERVPTVALNETLVVNLCSMYELAYVNHSDIKRTLSNWIA
Sbjct: 287 ALCLMYLRDLSDSIKVLESALERVPTVALNETLVVNLCSMYELAYVNHSDIKRTLSNWIA 346

Query: 358 RVAPDDFDSSSTR 370
           RVAPDDFD+S TR
Sbjct: 347 RVAPDDFDASCTR 359


>Glyma11g36180.1 
          Length = 361

 Score =  523 bits (1347), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 255/357 (71%), Positives = 303/357 (84%), Gaps = 11/357 (3%)

Query: 17  SDPLSNQFGSLNDLAHELASLQDLANRGSWRSILDKVARARSLALLTTPHDHLTYLAYNV 76
           + PLS+Q   ++D  H+++SL++LA+RG+WRSI+DKV+RAR+L+LL  PHDHLTYLA+N 
Sbjct: 12  THPLSDQ---IDDACHDMSSLEELASRGAWRSIIDKVSRARALSLLHKPHDHLTYLAFNA 68

Query: 77  LAFVKLRRFKDALTELDSVDDFDSHHYRYETYPKIYPHRHGSMVPFSLRWLHAVIPLKLG 136
           LAF KLRRF +A  ELDS++D  S HYRYETYPKIYP+R GSMVPFSLRW+HA+IP+KLG
Sbjct: 69  LAFTKLRRFNEASAELDSLEDLHSSHYRYETYPKIYPNRIGSMVPFSLRWVHALIPIKLG 128

Query: 137 NRQEGLDRFYILLDFVRGKLKEKQ---GFDFSSKIWRNREVFVMNWIISEHLKNKEFTIC 193
            RQ+G+DRFYILLDFVRGK+ EK+       S  +WR REVFV+N II  HL  KEF +C
Sbjct: 129 QRQQGMDRFYILLDFVRGKINEKEKQNNLGVSLNLWRKREVFVVNCIIGNHLSQKEFGVC 188

Query: 194 LDLIKDLVSRGNFDPVLLSKLGCIQMQIGDLEGAKGSFEKVEKLLEERIAGGSDESLSEV 253
           L L+K+L+SR   DP+L+S+LG +Q+QIGDLEGAK SF KVE+L        ++ SLSEV
Sbjct: 189 LSLMKELLSRDCSDPLLVSQLGYMQLQIGDLEGAKISFLKVEEL-----GKSNNGSLSEV 243

Query: 254 EFRNLVNRNKALVYLVGKDYVSAVREYEECIDRDPMDVVAINNKALCLMYLRDLSDSIKV 313
           EFRNLVNRNKALVYLVGKDYVSAVREYEECI+RD  DVVA+NNKALCLMYLRDLSDSIKV
Sbjct: 244 EFRNLVNRNKALVYLVGKDYVSAVREYEECIERDSADVVAVNNKALCLMYLRDLSDSIKV 303

Query: 314 LENSLERVPTVALNETLVVNLCSMYELAYVNHSDIKRTLSNWIARVAPDDFDSSSTR 370
           LE++LERVPTVALNETLVVNLCSMYELAYVNHSD+KRTLS+WIARVAPDDFD+S TR
Sbjct: 304 LESALERVPTVALNETLVVNLCSMYELAYVNHSDVKRTLSSWIARVAPDDFDASCTR 360


>Glyma04g33100.1 
          Length = 77

 Score = 70.5 bits (171), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 33/75 (44%), Positives = 48/75 (64%)

Query: 34  LASLQDLANRGSWRSILDKVARARSLALLTTPHDHLTYLAYNVLAFVKLRRFKDALTELD 93
           + SL+DL N  +W SI +KV+ A + +LL  P++HL Y A N +AF+KL  F     +L+
Sbjct: 1   MNSLKDLENCDTWNSITNKVSHAYTFSLLQNPYNHLIYHALNTIAFIKLHCFNVGFVDLN 60

Query: 94  SVDDFDSHHYRYETY 108
           S+ D +  HY YETY
Sbjct: 61  SLKDLNISHYCYETY 75